Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_948473455.1
Location
OX419604.1:7159057-7161456[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 6.2 7.8e+03 -2.4 0.0 4 19 154 169 153 172 0.88
2 6 0.55 7e+02 1.0 0.0 22 36 229 244 225 254 0.74
3 6 4.5e-08 5.7e-05 23.7 0.1 1 45 260 306 260 307 0.95
4 6 6.8e-08 8.5e-05 23.1 0.1 2 44 314 360 313 362 0.94
5 6 1.4e-12 1.8e-09 38.1 0.0 1 43 366 408 366 410 0.97
6 6 5.6e-05 0.071 13.8 0.0 3 45 419 465 417 466 0.92

Sequence Information

Coding Sequence
ATGAGCTTGTCGGAGAGCGAATACAGTGATAGTAGTTTGACAGATGAGGAAGCACAACAAGAAGAACTTAGAAAACTTAAAGCGTTGTTAGAAAAAGATCGTCGTCCCCAAACTGAATCATCTCAACCCTCTGCCGATTGCAGAGCCACTTGGCTAGCTCAAAAAGAGTGTATTCAGAAAGCTTTGATATTAAATAGGGAAATAGATGAGAGGTTACAGCATCTAGAAAGAGTCCTAATTAATCGATTACGAGAATGCCGGCAACGCTTGAGTGAGATACATAACACTTCTATGAATCAAAGATCTGTTGACCACAGACCACAGCCCTTTCGCTCTCTCTTCTGTGGGAAGCCCTATTTCAAAGACAGAGACCACTTCGCACCACCAGATAATGATGATACAGTCACAATGCAAAGATCAGGAATGTATGACTATTCAGATGCCACAAGTATATCTGGTTGGACTGTGAAAGACAAAAGTGAATTCCTTAAACAAATTCAAAAATTTTCTCACAACATCCGAAAGAAAGAATTAGAATCTAAACTTGCAGAGTTACGTAGACAATCTAAAAAGCAAGACTCCAAGGCTCTGCAGAACTCAATAATTGCTCTTCAAAAAGACATTGATAATGTTAAAGAGTTACCATTGGATGTGGATTTAGCATTGCCTCTGGATAAGGAGTATGACTGGGATGCAATAGCAAATGCGCTCAATTATAGACACTCATCAGAAGAATATCAGTCACTTTGGAAGCTGTACTTGCATCCAGTAATTAACAAAAAAAATTGGGATAAAGCTGAACATGCAAAGTTACATCAAATAGCAATGTCTAACCAATTTCAAGATTGGGACAAAATTGCTGCAGAACTAAATACTGACCGGACCGGATACCAATGCTTTGTTTATTATCGTACCAATATGGGTAACTCTTTGAATGGACAGAAATGGTCCAAGGAAGAAGAAGAATATTTAAGGAGGCTGATTGATTACTATAGGGAAGGTAGTTATATACCTTGGGGCAAAGTGGCTGCTTCAATGGAAAATAGAACAAAAATCCAAATTTACAACAAATATGCTCGGCTAATGGAACATAGAAAAGGAAGATTTCTACCTGAAGAAGATTCTGTTCTCTTAACTGGTGTTGAAAAATTTGGGCCTGTCTTTAAAAAAATTGCAAAATATATTCCAGGACGTTCTGCAGCTCAGTTACGTAATAGATTTCATGTACTCAATACTTCAACACGTACATCAGTAGTGTGGACTGTGGAAGAAGACAAAAAACTTGTTCAAATGATGGCTAATCAAGATGCTACGCAATATATCAATTATGCAAATCTAATATCATATTTTCCAGACAAGGACAGAACCCAATTAAGATCAAGGTACCTAACACTTGTCAAATGGATAAAGAAACACCCAAACAAAGATATTGCAGGAGCACCAAGAAGAGGAGCACGCCGTTTAATTCATGGCAAAGGAGAAGGAGACATGAACTTGGCAGTTGAAAACTTAAAAAAAAGAATTCAGTGTGAATTAGAAACCAAAAAAATCAAAAAAGTTACCAAAGACTCACCAGACGAAGTGATTGAGCATGCAATAATTGCAGCACTTATTACAGAAAATGTACGAGATGAACAGAAGAAAAAACAAAATAGTACTGATGATGATGATGATGACACATTTTTACAGTCTCACAATATTGGCAGTGTAGATGAATCAAATCTTCGTAAGTTACTGATTTTACTGAAAGTAAAATTAAACAAGCAAATGTTTGAATCAAGCCTTAATGCCGTAAAATACCCTAAATTAAAACAACCGGAAGTTGTCTCCTTCAGTGTCAAAGTAAAATCGTATTCGAAAAAATCTGCTACAAATATTGTAACAATGACTGCTGAAATTAAACCACCAGACATATTTGGTAATAATAAACTGACGAAAACAGAGTATGTGCTCCCTCCAAACTACTCCACAATAACTGGTTGCAGAAAACTGATGTCTGTAGCCAGTTCTAGGGCTCAACAATGTAAATCACTAAGTTTACATCAGTTTACGAATAGAAATGCATTAGTAAAAGAACAAGTTTACATTTTCATGGAAAGATTCAATACCTTATTTTTATGGCCTTTAATACTGTCCAATGAGCCGCCTTTCACAAAGGTATTGAATCGAGTACAAGTGCCAGAAAAGCACATAAATTTGAGAGAACGTCTTGCAGATCCCGTTAGTGTGGCAATACCTACACCTCCATGTATCTTAAATGAATCAATTGATCTGCCTAGCACAAGCAAGTTGCGCACTTTTGTAAAGCCTAAAGTAGGTAATGATGATTTTATGGTTTTCAAAGATAATGACGCTGATCTTGAAAGTTCAGATGATGATGATGATGATGATGATGAGTGA
Protein Sequence
MSLSESEYSDSSLTDEEAQQEELRKLKALLEKDRRPQTESSQPSADCRATWLAQKECIQKALILNREIDERLQHLERVLINRLRECRQRLSEIHNTSMNQRSVDHRPQPFRSLFCGKPYFKDRDHFAPPDNDDTVTMQRSGMYDYSDATSISGWTVKDKSEFLKQIQKFSHNIRKKELESKLAELRRQSKKQDSKALQNSIIALQKDIDNVKELPLDVDLALPLDKEYDWDAIANALNYRHSSEEYQSLWKLYLHPVINKKNWDKAEHAKLHQIAMSNQFQDWDKIAAELNTDRTGYQCFVYYRTNMGNSLNGQKWSKEEEEYLRRLIDYYREGSYIPWGKVAASMENRTKIQIYNKYARLMEHRKGRFLPEEDSVLLTGVEKFGPVFKKIAKYIPGRSAAQLRNRFHVLNTSTRTSVVWTVEEDKKLVQMMANQDATQYINYANLISYFPDKDRTQLRSRYLTLVKWIKKHPNKDIAGAPRRGARRLIHGKGEGDMNLAVENLKKRIQCELETKKIKKVTKDSPDEVIEHAIIAALITENVRDEQKKKQNSTDDDDDDTFLQSHNIGSVDESNLRKLLILLKVKLNKQMFESSLNAVKYPKLKQPEVVSFSVKVKSYSKKSATNIVTMTAEIKPPDIFGNNKLTKTEYVLPPNYSTITGCRKLMSVASSRAQQCKSLSLHQFTNRNALVKEQVYIFMERFNTLFLWPLILSNEPPFTKVLNRVQVPEKHINLRERLADPVSVAIPTPPCILNESIDLPSTSKLRTFVKPKVGNDDFMVFKDNDADLESSDDDDDDDDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-