Tluc011893.1
Basic Information
- Insect
- Teleiodes luculella
- Gene Symbol
- -
- Assembly
- GCA_948473455.1
- Location
- OX419599.1:11708112-11710253[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-09 7.8e-06 26.0 0.0 4 41 18 54 15 56 0.90 2 2 2.9 3.1e+03 -1.5 0.0 12 22 133 144 128 145 0.53
Sequence Information
- Coding Sequence
- ATGTCTGGAAGAAGAAATAAAGAAAGGATGAAGGTGAAATGGAGCCAGAACTCTCTTGATTTAGCATTTAATCTCGTGTCAAACGGAACTCCAATAAGAAAAGCTGCACGAGAGTCTGGCATACCATTTTCTACACTACAGGAGAGACTGAAAAATAAAAACCAAGGTATTCCACGACTAGGAAGGAACACAGTATTTAACCAAGACCAAGAAACTGAAATGGCTGACCAAATCAAATTATTGGCTAAAATATTTTATGGCTGTACGTCGCTTAAAATTAGAATGGTGGCATATGAATATGCTGAAAAAAATAAAATACCTCACAACTTCAACAAAACTCTTGAAATGGCTGGAAGAGACTGGCTGGCTGGGTTTCTGAAAAGAAATAAATTATCTGTGCGAAAGGCTGAAGGCACGAGTATTAATagagctacagcttttaacaaagaggaggtaggactattttttgagctgctacaaaacttgatggaaaagtataagtttttacccagaaacatatataacgttgacgaaacaggagtctcttcggttcaagaacctggaaaaatcgtagctgagaaaggacagaagcgtgtggggtctataactagcggcgaaagaggtaaaaacgtgacagcggtatgcgcaatgagcgcaacaggaacgttcattccgccaatgctgatatatccacgtcaaaggcattcagctacattagaagttgacggaccacgtggagccatatataaatgttccaaaaatggctggatcaacgaagacctcttcgttgattggctaatacatttcgctggcatcacgaaaccgtcagaaaatgagccaatactcctcttactggataatcattgcagccacatctctttaagagcttacgagttctgcaaaagccataatatcgttatgctatcattaccacctcatgcctcacacagaatccaaccaatggatgtttctgtttacggaccattcaaaactgcctacaagcaagagtgtaacttgtttatgaaatctaatttgggtcgtcaaatcactcaaaatgacattgcatcactgttcaggaaagcatttcaaaaagtagcaactattccaaaagcggaatcgggttttgctgctactggcatttatcctctgaaccccgacgtatttACAGAAGAAGATTTCCTTGCTGCAGAGTTTTTGAATATGCGTGAAACTGATAACCAAACACTCAATCTTGCATCTAGACCAGCACTTCATAGCCCTTCTTCCGATTCTACGATTTCTGAATCACTCCTTATTCAAGATCTGATGCAGAACGTAGAAGAAAATATATTCAACGACGATGATATTCATTTTTTGAATATTGATGAGCCTGAAACTTTTCACCTTGAGCAACAAAAACTTGATTGCACCAACGAAGTTTTCTCAAATACCACCACCATCACCACACCACCACGCCACCATCCCGCCACCACTTCGTCCACCGCCAGCGCACCAACTGAAAACGTATTGTCGACTACCCAATCTGCAGACGTTACACAAATAATTGATTTCAACAATCCAATCCCTTCCACTTCTAAACAAGCCACTGCAAAAGCATTGTTGCCAATCCCAAAGCGAAAGACCGAAATTAAAAAGCAACGTTCTCGAAAACAACATTCAGCAATCTTAACAGGAACCCCTCTTAAACAAGTTTTAGTAGAAAAGGAAAATAGAAGGCTAGCCAAATTAAATAAAAGTAAAACTCAAACTTATCCAAAAAACACTGCTGGAAGAAATAAAACAAAAAAAACTACATTCAAAGAGACTGAAACCAAAAGTGATGCAAAATTTAAGGGGAAAATAAACAAAATCAAGAATAAGAGAACATCTGAAGTAAGACGAGTAAAGAAAAAAATTCTACAAGATTATGATAGTAATACATCTAACTCAGAGATAGATATGGAAGACCTACGAGAAGACAATGATACAGATGAAGATATAGATGAAGATTACCAGAACAGATGTATTATATGCGATGATTATGGACGAGATAATGAAATGTGGTACAGATGTGTAATCTGTGGTCGATGGGCTCATGAAGCATGCTCAGGATATGATTCACCCAGGGACTATAAGTGTGATTTATGCCTCAATAGTCCTTGA
- Protein Sequence
- MSGRRNKERMKVKWSQNSLDLAFNLVSNGTPIRKAARESGIPFSTLQERLKNKNQGIPRLGRNTVFNQDQETEMADQIKLLAKIFYGCTSLKIRMVAYEYAEKNKIPHNFNKTLEMAGRDWLAGFLKRNKLSVRKAEGTSINRATAFNKEEVGLFFELLQNLMEKYKFLPRNIYNVDETGVSSVQEPGKIVAEKGQKRVGSITSGERGKNVTAVCAMSATGTFIPPMLIYPRQRHSATLEVDGPRGAIYKCSKNGWINEDLFVDWLIHFAGITKPSENEPILLLLDNHCSHISLRAYEFCKSHNIVMLSLPPHASHRIQPMDVSVYGPFKTAYKQECNLFMKSNLGRQITQNDIASLFRKAFQKVATIPKAESGFAATGIYPLNPDVFTEEDFLAAEFLNMRETDNQTLNLASRPALHSPSSDSTISESLLIQDLMQNVEENIFNDDDIHFLNIDEPETFHLEQQKLDCTNEVFSNTTTITTPPRHHPATTSSTASAPTENVLSTTQSADVTQIIDFNNPIPSTSKQATAKALLPIPKRKTEIKKQRSRKQHSAILTGTPLKQVLVEKENRRLAKLNKSKTQTYPKNTAGRNKTKKTTFKETETKSDAKFKGKINKIKNKRTSEVRRVKKKILQDYDSNTSNSEIDMEDLREDNDTDEDIDEDYQNRCIICDDYGRDNEMWYRCVICGRWAHEACSGYDSPRDYKCDLCLNSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01403378;
- 90% Identity
- iTF_01403378;
- 80% Identity
- iTF_01403378;