Basic Information

Gene Symbol
-
Assembly
GCA_948473455.1
Location
CAOKYR010000468.1:6738-9719[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.046 1.5e+02 3.4 0.0 48 86 106 143 103 144 0.82
2 4 0.013 42 5.2 0.1 48 85 201 237 176 239 0.79
3 4 0.031 1e+02 3.9 0.1 49 83 293 326 281 328 0.79
4 4 0.00097 3.2 8.7 0.0 51 83 393 424 384 427 0.83

Sequence Information

Coding Sequence
ATGGAAGGCAGCAATCCTCACAACCACGGTTACTGGTTCGTTTTACGAGAGGATCAGGGCAACGTTATATTCAGTAGTAATAACGTCGCTAATGTTCAAAACCCACACATTTCTCAAATTCAAGAGCAACCGCGCTATATTGTTGAGGCAGCCAGACCGTACACGGAAGTGGATAATGCGCCCGCGCCGCCGCCTGTACTTGAAGACTCCGAGAGTAACGAAAAACCACTAGAAAAATGGCGAAAAACCAAAGACGACACTTTCTGGGACAAAAACAAACTGAAACTACTCCTCACGTTGAGCCTTGAAAATAAGAATGTTGACAAAGATATACCCTGGGACGACATCGCAAGTATTATTGGAGCTACGCCGTTACAGTGCAATATTAAGTACAGGCATCTGAGGAGAACATACCTTAGGTTATTGAGAAGAAAAAGAATGGGGAAAGATGTCAGGTGGGTCCACTACGACATATGTGAAGAAGTCTTCACAAAACTCAGGGCCCTGCCTCATTCTGTCATAGATCCGTGGGATGATTACAAAATAAAAAAACTACTTACTCTTTACATTGAATATTTGCCAAGGTTTCGCAACCCTAACAATTGTTTACAAAAAGATATTTGGAAGGAAATAGGTGCTCAGCTCGGCACCACAGGTTATCACTGCTATCACAAGTTCAAAAATCTAAAAAGGTCGTACATAACTTGGTTAAACAGAAATAGTGCAACGGGCAGAAAAATAAGATGGGCTTATTACCCATTTTTTGAAAGGATATACCAAAACCATAATCCAAATAAACGAGCTTGGGATAGGTTAAAGATCCAATTACTACTAGATGCTTATGCGCAATTAGCACACAAGTTTAGAAAACCCAAGTTCCAAAAGAAAGAACTATGGAATGAAATATCGAGGCAGGTTGGAGAAACTCCAGATGCTTGTGATAAAAAGTTTAGGAACTTAAAGCAAACCTATGTTAGACTAAGAACAAAAGCAAATTGTGGTAGACTTACAACCAAATGGAGGTATTTTAGGGACTTTGAAGCAATTTATGGAAATTTCCCAAGACACATAGATCCTAGTGGAACAATTTATACATCCAATACCGAAGATTACATAAAACAGCTTTTAGAATTTTATTTAAATCATAAAGATAAGTTTAGAGATCCATTAACAAAAAACAAAACATTGTGGAAAAAGATTGCTCCAAAGCTAGGACTGTCTCCCGAGGAATGTGATAAGAAATTCAGAAATCTGAAGCAAACATACGTGAGGTTGGCCTGGAAGAAACGGCAAAGTGGTAAGTGTAGCCAATGGCCTTATTTCTCGTATTTTGAGAAGATATACGATGAAGTACATAAGGATAGGGATTTGCGATTAAGCGAGACAGTAGGAGGGTGCGAAACGAAGCCAGATAGTGGTTTGGGGGCGACGCTGCGTGAGCTGCGGGAGCGCAGAGAGTCACATTGGCGTTTTGAACGACTGGTGCTACTCTCTGAGGAATCCAATCAAATTCAGAGAGAGAGAAATCGAATATTACAAGCTCTTCTGAATAGGACATGA
Protein Sequence
MEGSNPHNHGYWFVLREDQGNVIFSSNNVANVQNPHISQIQEQPRYIVEAARPYTEVDNAPAPPPVLEDSESNEKPLEKWRKTKDDTFWDKNKLKLLLTLSLENKNVDKDIPWDDIASIIGATPLQCNIKYRHLRRTYLRLLRRKRMGKDVRWVHYDICEEVFTKLRALPHSVIDPWDDYKIKKLLTLYIEYLPRFRNPNNCLQKDIWKEIGAQLGTTGYHCYHKFKNLKRSYITWLNRNSATGRKIRWAYYPFFERIYQNHNPNKRAWDRLKIQLLLDAYAQLAHKFRKPKFQKKELWNEISRQVGETPDACDKKFRNLKQTYVRLRTKANCGRLTTKWRYFRDFEAIYGNFPRHIDPSGTIYTSNTEDYIKQLLEFYLNHKDKFRDPLTKNKTLWKKIAPKLGLSPEECDKKFRNLKQTYVRLAWKKRQSGKCSQWPYFSYFEKIYDEVHKDRDLRLSETVGGCETKPDSGLGATLRELRERRESHWRFERLVLLSEESNQIQRERNRILQALLNRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-