Basic Information

Gene Symbol
XBP1
Assembly
GCA_948473455.1
Location
OX419586.1:13617593-13621603[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.4 4.5e+03 -1.7 0.0 15 25 28 38 27 39 0.80
2 2 2e-15 2.6e-12 47.1 6.6 2 46 43 87 43 88 0.97

Sequence Information

Coding Sequence
ATGAGCTCTCCGATAATCATCACGGTGCCTAAAAACTACTTGGCGATGGAGGAGGTGGATTCTAAGGTGGTCGTGGACGTGCCTCCGCAGCCCTCGCGGAAGCGCCGCCTCGACCACCTCTCCTGGGAAGAGAAGATGCAAAGAAAGAAGCTGAAGAACCGTGTGGCGGCGCAAACATCGCGCGACCGCAAGAAGGCGCGGATGGACGAGATGGAGTCTAACATCCAGCATCTGATGGAGGCGAACGAGAAACTGTCACAAGGAGGGGCCCCCGACGGCGCTCCGCGCGGCGCGCCTGCTGACGGCGATGTTCCTTCTCTCTCAGACATCCTCGCCCACCTCGACTCTGAAGAGTACCTCGATACCCTCCATCAACTTGCAGACTCCCTCCTCCAGGAAATTGATGCAGGTTCTACAGAAGAGGTTGCAAATGTCCCAGTCGAGCAACCTAAAGAGTGCCCTGAAGGAGATAAAGTGGTGGGGGCCGCAGCAGAGCACCTGGAACCCCGTGAAGGCGTGAGAGACCTCGCACACGACGTGCACACGATACTCGCACAGCACTCATACGCGCATCCCTACACGCCTGACGTCACGCGGCCCAGAGACGAGACCAACGACAAAGGAGACATGTTCTACGCGAGCTGCGACGACGAAAACGAATGCGTCACTATCGAAGTCCCTTGCGACGATCAAGTGGTGGAAGATATCGCTCCGATCAAGGTGGAGACTGACTTCAGCGCGTTGACTAACTGTGGATCAGACATCACGCTGGAGTGCGATATGCCTTTGTTATCGCCGATGAGTTTGTCGCCGAAATCAGCGGAGGAGAATCTTCTAGGCGTTTCGCCGTCGCACACGTCGCTAAGCTCGGACCTCGGCTACGAGTCGCTGGCCTCGCCGCTCAGTGAACCGGAATCTTTGGACTTGTCAGATTTTTGGTGCGAATCGTTATCAGAGCTATTCCCTGGCCTAGCGTAG
Protein Sequence
MSSPIIITVPKNYLAMEEVDSKVVVDVPPQPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKARMDEMESNIQHLMEANEKLSQGGAPDGAPRGAPADGDVPSLSDILAHLDSEEYLDTLHQLADSLLQEIDAGSTEEVANVPVEQPKECPEGDKVVGAAAEHLEPREGVRDLAHDVHTILAQHSYAHPYTPDVTRPRDETNDKGDMFYASCDDENECVTIEVPCDDQVVEDIAPIKVETDFSALTNCGSDITLECDMPLLSPMSLSPKSAEENLLGVSPSHTSLSSDLGYESLASPLSEPESLDLSDFWCESLSELFPGLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-