Basic Information

Insect: Teinopalpus imperialis
Gene Symbol: -
Assembly: GCA_029286865.1
Location: JAGSMU010000031.1:8235395-8242596[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0019 0.21 13.0 0.5 2 23 240 262 239 262 0.96

2 8 0.033 3.7 9.0 0.1 1 23 267 289 267 289 0.97

3 8 0.00019 0.021 16.1 1.7 1 23 293 315 293 315 0.97

4 8 0.018 2 9.9 1.0 1 23 328 351 328 351 0.90

5 8 0.00021 0.023 15.9 1.3 1 23 355 377 355 377 0.99

6 8 6.5e-05 0.0072 17.6 1.1 1 23 407 429 407 429 0.97

7 8 0.011 1.2 10.5 0.2 1 19 435 453 435 455 0.85

8 8 0.48 54 5.4 0.5 2 23 464 486 464 486 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0019	0.21	13.0	0.5	2	23	240	262	239	262	0.96
2	8	0.033	3.7	9.0	0.1	1	23	267	289	267	289	0.97
3	8	0.00019	0.021	16.1	1.7	1	23	293	315	293	315	0.97
4	8	0.018	2	9.9	1.0	1	23	328	351	328	351	0.90
5	8	0.00021	0.023	15.9	1.3	1	23	355	377	355	377	0.99
6	8	6.5e-05	0.0072	17.6	1.1	1	23	407	429	407	429	0.97
7	8	0.011	1.2	10.5	0.2	1	19	435	453	435	455	0.85
8	8	0.48	54	5.4	0.5	2	23	464	486	464	486	0.96

Sequence Information

Coding Sequence: ATGGCCAAATGTGCCGATATGAAAGAAGTTGTAAAACATATAGTAAATGGTTCATTTAGTGAAAATTTATGCCGAATATGCTTATTGCCACTCAACTCTCTAAGCGAGGATATTTTTACTACAGTTTGCAAGAATGATAGTGAATACTGCATTGCAGACGTATTGGTAGAGATTTGTAATGTGAAGatCTCACAAAGTGACAAATACAAAATCTGTTCTGAATGCTTTTTAGCTGCTTCCTCAAGTTACAAATTTTACCTATTAACAAAAAGAAGTGAAGAAATAatcgatttttatattaatatattggaGGAAcacatgaataatataaatatttctaatgacTTTCCAACTGATTCTCTGTGTGTAACACTACCATTGTGTTATCCAGGCACAcagatttttgattataatttaacagGGATTTTAactgaaaatgttttattgccAGAATTCAATGACAcagatcataaaattaaaactagtgACAGCCCTTTAGATGATGGTAGTCAAAATATTTCTGACAATGAGGATGACAGCGATATACTTATCATAGCTGATGAAAACGGTGAATCAACATTTTACAAGGCACAAGAAGGTACTTTAGTTCATGTAGATGAGAATGGTACAAGTCAAATGAACAAGGTGTTAAAGAAATCACTTCCTAACAGTAACAGGGTGAAGAGGAAAAGACGGAGAAATCCAATGAGCTATATAATGTGCAGTAAATGTCCAGTACGGTATAAATTTGTAGCAAAATTGAAAGAACATATGAAAACTGAACACaatattgatttgtttatttgcATGgTATGCAAAGCAATCATTGAGGATGAAGATGAATTTAACAAGCATCTAAAAACACATTCGAACATACACAGATGTTCAAAATGCAATGTAGTGTTTAAAAATCGTGATAGCATCATAACACACATAAAATGGCATGAGGAAATGGAAAATCTGAAGGAAACTGAAGGAGCTCATATCTGTGAAATCTGTGGCTTGGTGTTGAAAGATGATGAGCATTTGAAAGAACATAACGACAAGAAACATGTTAAGAAATATACATGTTACTATTGTGGGCGTATGTATAAGGGGGAAATAAGTTTCGAGACCCATATAAAGAAGCATGAGATGCATCTAAATGATaagaaTAGGCAAACAGACAAAGTTAGGGTCAAAGAAGAACAGGGAGAACCAGTGAAGAAAAGTAAGAAGTTCTGTTGCGGAACATGCGGACGTGATTTTGTGGATGAGCGATCCCTTATGTGGCATCAACGCTTGCATACTAATGAGAGGCCGTATGTTTGTGATgtttgcgGCCGTCGCTTCGTGTCCTCCAACCGGCGCAACCAGCACGCGACGTGCGCGCACACCGCGCCCGCCCGCCGCTGCCCGCTGTGCCCCGCCCTCTTCCACCTGCGCTCCATGGTCAACACACACGTAAAGAAGGTGCATCTCAAAGCTCACAAGCGAAGGAATCGAACCAGTAAGCATCAGAATGTGTTCTGGCGTACGGAACCTGTGCCCATACAAGAGTTGAGCGTGTCCATACAGAGCGAAATACTGGAGCTGCAGGCCGCGCAGCAACAGGCGGTCAATGGGGTCGAATGGGTAAACTATCTTCTGTACTCACTAGTCTGTTTGCTAGCTGTAGAATGa
Protein Sequence: MAKCADMKEVVKHIVNGSFSENLCRICLLPLNSLSEDIFTTVCKNDSEYCIADVLVEICNVKISQSDKYKICSECFLAASSSYKFYLLTKRSEEIIDFYINILEEHMNNINISNDFPTDSLCVTLPLCYPGTQIFDYNLTGILTENVLLPEFNDTDHKIKTSDSPLDDGSQNISDNEDDSDILIIADENGESTFYKAQEGTLVHVDENGTSQMNKVLKKSLPNSNRVKRKRRRNPMSYIMCSKCPVRYKFVAKLKEHMKTEHNIDLFICMVCKAIIEDEDEFNKHLKTHSNIHRCSKCNVVFKNRDSIITHIKWHEEMENLKETEGAHICEICGLVLKDDEHLKEHNDKKHVKKYTCYYCGRMYKGEISFETHIKKHEMHLNDKNRQTDKVRVKEEQGEPVKKSKKFCCGTCGRDFVDERSLMWHQRLHTNERPYVCDVCGRRFVSSNRRNQHATCAHTAPARRCPLCPALFHLRSMVNTHVKKVHLKAHKRRNRTSKHQNVFWRTEPVPIQELSVSIQSEILELQAAQQQAVNGVEWVNYLLYSLVCLLAVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -