Basic Information

Insect: Teinopalpus imperialis
Gene Symbol: B0310.2
Assembly: GCA_029286865.1
Location: JAGSMU010000038.1:1770394-1793136[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.034 3.8 9.0 0.6 1 23 374 396 374 396 0.97

2 10 0.024 2.6 9.5 0.8 1 23 403 426 403 426 0.93

3 10 0.35 39 5.8 0.2 1 23 430 452 430 452 0.92

4 10 0.0036 0.41 12.1 2.9 1 23 457 480 457 480 0.98

5 10 0.0026 0.28 12.5 0.7 1 23 484 507 484 507 0.96

6 10 0.22 25 6.4 0.2 3 23 597 618 596 618 0.96

7 10 0.0038 0.42 12.0 0.6 2 20 634 652 633 655 0.92

8 10 8e-06 0.00089 20.4 2.3 1 23 661 683 661 683 0.98

9 10 0.00022 0.024 15.9 2.8 1 23 690 712 690 712 0.98

10 10 9.6e-05 0.011 17.0 2.6 1 23 718 741 718 741 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.034	3.8	9.0	0.6	1	23	374	396	374	396	0.97
2	10	0.024	2.6	9.5	0.8	1	23	403	426	403	426	0.93
3	10	0.35	39	5.8	0.2	1	23	430	452	430	452	0.92
4	10	0.0036	0.41	12.1	2.9	1	23	457	480	457	480	0.98
5	10	0.0026	0.28	12.5	0.7	1	23	484	507	484	507	0.96
6	10	0.22	25	6.4	0.2	3	23	597	618	596	618	0.96
7	10	0.0038	0.42	12.0	0.6	2	20	634	652	633	655	0.92
8	10	8e-06	0.00089	20.4	2.3	1	23	661	683	661	683	0.98
9	10	0.00022	0.024	15.9	2.8	1	23	690	712	690	712	0.98
10	10	9.6e-05	0.011	17.0	2.6	1	23	718	741	718	741	0.95

Sequence Information

Coding Sequence: ATGAGGTGCAGTGTACAAAATTGTACAAATGATACGAAGCGTACTACAAAAAGTCATGGAATCACATTTCATATGTTTCCAAAAGAAACTAACCTACGTACTGCCTGGATCGAAGCGCTAGGTATGATGGACTGGGAGCCTCGCGACCGTAGCACCATATGCTCTGAACACTTCCGGAATGAGGACTTCTATCAGACCAAGTGTGGTTTAAGGAAGATTAAAAATGGAGCGGTCCCTGTTATTGTccagAACTCCAGTGAAGACCTGGACGCCCCTGCCGCATTAAGGGTATGCAGAGTATGCCTGGCAATGGACACTAAGCTATACCATATTATGGAGTACAAGCTTGACAGAATCTATCAGGAAATCACCGGATTGATGCTTAGCGAAGAAGACAAATTACCACAAAAGCTGTGCTGGGAGTGTTCACAAAGGATGATATCCTGCCAACGCTTCAGGAACCGGGCTCTGACCAGCCACCAGCTCATGCTGGCGGCCCTGGATATGGAGAGATATATCACAATACGAGACGTGAAGTCGATAAATAGAGTGGCAACAGATCTCAAGTCCTCACTTATACAAAAGAACTACGACGTGAACGACTGCGATCTGATGATACGCGATGACGTTGTGATCTTCAAAAGTGAGATCGGTGACGTCAACGGCATCGACGACGTCGCCGAatacgacgacgacgacgatcGTCCCGATGACATCGGTGACGTGAAAGAAGAAGTAGAAGCGATCCCTCCCATAATGGAAGTGGAGATCAAAGATGAGGCCAATGAAATATTCTTCCACGAATATAACAACTTTGACAGTGATGACGATAAGAAATTGAGCGAGGTGTACGCGAAGCCCAAGGCGAAAGTGAAGAAGAGGAAGTTGAAGGAGGAGAAAATGGAGAAGAAAGTGAAAATAGGCAAGACTGTTAAGAGGAAAGAAGAAGACGATAGTCCTTCAAGTACTATGGATAAGTATAAAAATTCCGATGTCAAAAGGAGGAAACCCAATGATGGGTTGGACGAGTCGCTCTTCACCATATCCACGTTGACGTACGATGAGCAGATAGAGGAGATCACCAAGCGACAGGAGGTCAGCATGTACAAGAACGCACCGTACAAATGTACCGTATGCTACCGAGGATTCCAGATCAAGGATCGATATGAGGCTCATATAGTCAGGCATAGCGAGCAAAGTGGCGCTTACGAATGCTTCATCTGCAAGACCAGGCTGAAGACCGGGCGAGCGTTGAGGAAACACCTCACCGCCCAGCATACAGAGAAGTTCAGCTGTAAAGGATGCCCCTTCGTTACGAGGAACAGagGCGTGGCGAGGGAGCACGAAAAATGGCATGCTGGTACTAAATACCAATGTCCACACTGTCCCTGCGAGTTTGAcAAATTAACAACATACATGGGACACATAAGAATCAAACATGTGTCCGACTTCGTGTGCGAGCTGTGCGGGTACACGTTCGTCAGCAAGAAAGGCATCGACGTGCACAAGAAGAAGAAACACCGGTTGCACGACAAGACCGTAACACTCGAGGGTCCCTACTGTGATTTGTGCGAAGTGCGTTTTATATCTGACGAAGCGCACGCGAGGCATCTGAAATTAtcatcgaaacacagcagcgataacGATCCcAACCGTATCAGGAATGATTCGCAAAGCAAGAACTCGGAGCGCGTGGGCAGGACCGTGAGACGTATCGAGAGGCGGCCGGTGGTGCATCCGCGCGGCGCCGTGGACAGGGAGCTCGGCACCGATCCCGGGCCCGTCGCCTGCGAGCAGTGCGGCCTCCAGCTGCGCGATTTGCGTCTATACGCGCAACACTTCCGACGAGCTCACCCGGACAAGAATCGTACCAAGTATCCCGCTATGAAAACGCCCTGCATGTGCGAGCAGTGCGGCAAGATCTTTCAGagTATGGCATTATTGAAGGACCATATGTGGGTCCACACCGGTGAGAAGAGGTTCAAATGTTCCAGTTGCGATAAGAGCTTTACACAGAAGAGCAACCTGGTGTTCCATCTGAGGGTCCACAGCGCACAGCGGCCCAGCTACGAGTGTCCATTGTGTGGCAAGCATTTTGCATTCTTCAACAATCGAAGACGGCACATGTTTATCCACACGGGGCTGAAGCCGTTCCGCTGCGACACCTGTGGCAAGTGCTTCACCACGGCCGGAGAGCAGCGGGCGCACGTGCAGCATGTCCACCTGAAGAAGCCCTGGCCCAAGCGCGCCCGCTCGCGCCGCGACTGGCACAAGGCGCAGCTGTAA
Protein Sequence: MRCSVQNCTNDTKRTTKSHGITFHMFPKETNLRTAWIEALGMMDWEPRDRSTICSEHFRNEDFYQTKCGLRKIKNGAVPVIVQNSSEDLDAPAALRVCRVCLAMDTKLYHIMEYKLDRIYQEITGLMLSEEDKLPQKLCWECSQRMISCQRFRNRALTSHQLMLAALDMERYITIRDVKSINRVATDLKSSLIQKNYDVNDCDLMIRDDVVIFKSEIGDVNGIDDVAEYDDDDDRPDDIGDVKEEVEAIPPIMEVEIKDEANEIFFHEYNNFDSDDDKKLSEVYAKPKAKVKKRKLKEEKMEKKVKIGKTVKRKEEDDSPSSTMDKYKNSDVKRRKPNDGLDESLFTISTLTYDEQIEEITKRQEVSMYKNAPYKCTVCYRGFQIKDRYEAHIVRHSEQSGAYECFICKTRLKTGRALRKHLTAQHTEKFSCKGCPFVTRNRGVAREHEKWHAGTKYQCPHCPCEFDKLTTYMGHIRIKHVSDFVCELCGYTFVSKKGIDVHKKKKHRLHDKTVTLEGPYCDLCEVRFISDEAHARHLKLSSKHSSDNDPNRIRNDSQSKNSERVGRTVRRIERRPVVHPRGAVDRELGTDPGPVACEQCGLQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGKIFQSMALLKDHMWVHTGEKRFKCSSCDKSFTQKSNLVFHLRVHSAQRPSYECPLCGKHFAFFNNRRRHMFIHTGLKPFRCDTCGKCFTTAGEQRAHVQHVHLKKPWPKRARSRRDWHKAQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00204413;
90% Identity: iTF_01402777;
80% Identity: iTF_01402777;