Basic Information

Insect: Teinopalpus imperialis
Gene Symbol: -
Assembly: GCA_029286865.1
Location: JAGSMU010000026.1:4484625-4497893[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 2.5e-07 2.8e-05 25.1 1.1 1 23 357 379 357 379 0.98

2 7 0.00021 0.023 16.0 0.3 1 23 385 407 385 407 0.95

3 7 0.00015 0.016 16.4 3.0 1 23 413 435 413 435 0.98

4 7 0.00014 0.015 16.5 2.7 1 23 441 463 441 463 0.99

5 7 0.72 80 4.8 0.4 15 23 486 494 484 494 0.92

6 7 0.00055 0.061 14.6 6.1 1 23 500 522 500 522 0.98

7 7 3e-05 0.0033 18.6 0.2 1 23 528 551 528 551 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	2.5e-07	2.8e-05	25.1	1.1	1	23	357	379	357	379	0.98
2	7	0.00021	0.023	16.0	0.3	1	23	385	407	385	407	0.95
3	7	0.00015	0.016	16.4	3.0	1	23	413	435	413	435	0.98
4	7	0.00014	0.015	16.5	2.7	1	23	441	463	441	463	0.99
5	7	0.72	80	4.8	0.4	15	23	486	494	484	494	0.92
6	7	0.00055	0.061	14.6	6.1	1	23	500	522	500	522	0.98
7	7	3e-05	0.0033	18.6	0.2	1	23	528	551	528	551	0.96

Sequence Information

Coding Sequence: ATGTTTGATCCAAGCAGTTCTATAAGCCTAAGCTCGTGTCGTATATGTTTATCAAATAAGAAACCCTTGTGTCCATTATTCAGATATAAATTATCTGGTAACTATGCAGAAATGCTTACCGCTATTGCTGATGTAAAGGTGTTATCAAATGATGGATTACCTGAAAAAATTTGTCATAAATGTTGTACTTCCTTAGAGAAAGCATACCTTTTGAAAACAGTGGCAGAAAGGACCGATAAAAAACTACGAACAATCTTAGCGAAAGCCCATCAGAATGttccaacaaaaaaaattgcatttgatTCATTTACAGACATTAAAAGTGAAATTGGTCCATTGTCAATTAAAACTGAACCAAAATGGGAAATGGAAATTGATATTGAAGAAAATTCAAATAAGCAAATAGAAACTATAGAAGGAAAGGACATAGTTATAGCTAACACTGTTATAAGAAAAGTGGATCCTGAAACtgatgaaatgaaatttgaatCTGTTATTGATGACAAAGTAGATATAAGTTGGAAATCATCTAAATCCCAGAATGAAGAGGATGATAATGAAGATGACGTTGAATATTTGGATGATGCTTTtcatgatgacgatgatgatgattatgtaCCACCAACTGAGaaaaaatctaaattcaaaAAACCAAAATTGTgtgatataaaagtttttaaaggtAAGAAGGCTGTTGTAAGAAAAGTTAAAGTATTAAAGAAACTTACAAATGAATTAGAAGAAATTGGAAGTAAAAGTGATGATGGCAAACCAAGAGCTACCACAATTACATGTTATCCTATATTGAAGAATGGCTCACGAGGTCCACCAATATTACTAAAAAGGCCTAAAGATGCAACTATTCTTAAAGTTCATCCAAATTATAAATCAAGAAGTTCAGGAAACTCCATTGAGGGAAATAGAGTAGTTCGTAGGGATAAAACAGTTAGATTAGTGAGAAGTCAGAATCCTGAAGTAAAAAAGAGAGAAAAGCTTGTGTGTCCTGTTTGTGGTATACTTACTTACACACTTGGAAATCACATAGCTACTCATGAAGaaaagAAGAAATTCACATGCACTCAATGCCCAAGATCATTTGTACAAAGGAGTAACTTGCTTGTGCATATGAAACAACATTCAGGAATAAAAGATCACATTTGTGAAGTTTGTGGTGCTGCATTCTATACACAGAAGTCATTAGTTAGACACAACCTGATCCATAAAGGTGAAAGACCTTTCTCCTGTAATTTGTGCTCAAAGAAATTTATTGCtCGTTGCGATCTGAACCGTCACCTGCGCATACACGCCGGCTATAAGCCGTTCAAGTGTACCGATTGCGTGATGTCGTTCAACGCAAAACATCAGTTGCAAAACCACGAGCGAATGCACACCGGGGAGCGGCCGTACTCTTGTCAGGTGCGTTCTCACTTTTCTTTCACTCTCTTACAGGGGACGAGTCTCCGACGCCACATGAGATCTCACGCTGGCGACAAGAGATTCGTCTGCGAACATTGCTCTAGGAGCTTTATGCAGGGCCATCACTTGCAAAACCATTTGCTTACACACACCGGTAAAAAGCCGTTTAGCTGTGAGGTATGCAATGTGGCTTTCAGCTATAAAGTGAATTTAAACAATCATGTACTTAAAGCCCACGGACTTAACCTGAAGTTCAAGTCAATACACACGGTGACTGAGGATGTGCTAAGAAGAGAAATGGGGATGGTGAACGAGGCGCGTGTTGCAATAGCGCATATAATGCCACATCTAAACGATGTACCCACACCCGCTGCGCATGAGACTGTACACCACACGGCGGATTATTAA
Protein Sequence: MFDPSSSISLSSCRICLSNKKPLCPLFRYKLSGNYAEMLTAIADVKVLSNDGLPEKICHKCCTSLEKAYLLKTVAERTDKKLRTILAKAHQNVPTKKIAFDSFTDIKSEIGPLSIKTEPKWEMEIDIEENSNKQIETIEGKDIVIANTVIRKVDPETDEMKFESVIDDKVDISWKSSKSQNEEDDNEDDVEYLDDAFHDDDDDDYVPPTEKKSKFKKPKLCDIKVFKGKKAVVRKVKVLKKLTNELEEIGSKSDDGKPRATTITCYPILKNGSRGPPILLKRPKDATILKVHPNYKSRSSGNSIEGNRVVRRDKTVRLVRSQNPEVKKREKLVCPVCGILTYTLGNHIATHEEKKKFTCTQCPRSFVQRSNLLVHMKQHSGIKDHICEVCGAAFYTQKSLVRHNLIHKGERPFSCNLCSKKFIARCDLNRHLRIHAGYKPFKCTDCVMSFNAKHQLQNHERMHTGERPYSCQVRSHFSFTLLQGTSLRRHMRSHAGDKRFVCEHCSRSFMQGHHLQNHLLTHTGKKPFSCEVCNVAFSYKVNLNNHVLKAHGLNLKFKSIHTVTEDVLRREMGMVNEARVAIAHIMPHLNDVPTPAAHETVHHTADY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00249961; iTF_01116005; iTF_01130335; iTF_01176464; iTF_01496094; iTF_00180807; iTF_01494637; iTF_00197631; iTF_00195456;
90% Identity: -
80% Identity: -