Basic Information

Insect: Teinopalpus imperialis
Gene Symbol: -
Assembly: GCA_029286865.1
Location: JAGSMU010000011.1:10187474-10211034[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.15 17 7.0 1.5 2 23 208 230 207 230 0.95

2 10 0.00052 0.057 14.7 1.6 2 23 236 257 235 257 0.96

3 10 0.00065 0.072 14.4 1.9 2 23 264 286 263 286 0.95

4 10 0.031 3.4 9.1 1.1 2 23 293 314 292 315 0.95

5 10 0.046 5.2 8.6 0.1 5 21 325 341 324 342 0.92

6 10 6.2e-06 0.00068 20.8 0.8 1 23 349 371 349 371 0.99

7 10 5.9e-05 0.0066 17.7 8.6 1 23 377 400 377 400 0.97

8 10 0.00073 0.081 14.2 0.2 1 23 417 439 417 439 0.95

9 10 0.0021 0.24 12.8 0.1 2 23 445 466 444 466 0.97

10 10 0.00071 0.079 14.3 0.2 1 23 472 495 472 495 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.15	17	7.0	1.5	2	23	208	230	207	230	0.95
2	10	0.00052	0.057	14.7	1.6	2	23	236	257	235	257	0.96
3	10	0.00065	0.072	14.4	1.9	2	23	264	286	263	286	0.95
4	10	0.031	3.4	9.1	1.1	2	23	293	314	292	315	0.95
5	10	0.046	5.2	8.6	0.1	5	21	325	341	324	342	0.92
6	10	6.2e-06	0.00068	20.8	0.8	1	23	349	371	349	371	0.99
7	10	5.9e-05	0.0066	17.7	8.6	1	23	377	400	377	400	0.97
8	10	0.00073	0.081	14.2	0.2	1	23	417	439	417	439	0.95
9	10	0.0021	0.24	12.8	0.1	2	23	445	466	444	466	0.97
10	10	0.00071	0.079	14.3	0.2	1	23	472	495	472	495	0.96

Sequence Information

Coding Sequence: atggagaaaagaaaagaatctTTAAGTGCATTAAAATTGTGTAGATTTTGTTTGACTGAAAATGAATCGCTCGGCTGCCTGTATAACAAGCATCGGTCTGATAGAAACTCTGTTGACTTTCCTTTAAAAATCTTATCTTGTGTCTCCATTGagGTATTCCCTTCAGACAAGATGCCATCTTTTATGTGCGACCACTGTCAATTTTTTATGGATCTCTTTTACCAATACAAACAGATGGTTCGCCGAGCTGATgagaacattttaaattatatccgAAACGGCACGGAACTGGAATCTGTCCCTTGGCCTTCTTCACTcattacagtATATCAGGAATCAATACAGCATGGGGTAGTGAAAACGATTGTAGAAGGCGGTGCTACAGTCCATGTTAGCACTCATGATGGATCGGACAGTGATGACGAAGAGgatgaaaatgttttcaatgtAACGATTGCAGATGGCTCTGATGATGGGTCTAAAGGTACCTGCATTAAAGTTGTTACCAGCAAAGATAATAAAGATAGTTCCAACAAACAAGATAGCAAAGATGGCAATATTGtggaaattaaagaaaaagttgTTGAAGAAATCTCAGGAAGTCTTAATAATGGCTGCTGGCCATGTTTGCAATGCGACTGCACTTATCCTCTTCAGCAACAATTAGAATTGCATAAAAAGCGAAAGCACAGAGAAAGAATGGTTAGGTGTGACCACTGTGATGCtaaattctttaataaatatgatctgGCAACTCATCAAGTGCGCCATTCAGAAGACCAACCATTAAAATGTGTAGCTTgtgataaaacttttaaacttttatattcacTTAAACATCATCAAAAGGTAGTACATTCAGAATTACTAAAGAAAGTCTGCCCCAAATGCCCTGCcacttttttaaatgataaggaACTGGAAGTGCACAAAAGAAAACATCATCTTTATCCAAGAATACTTTATGGATATGGGTGTGGCAGAAAGTATAGTAATAAAGCGTCTCTTGATAGACACAAGAAATTAATGGTCAGCAAAGATCACTATTCCTGTGAATACTGTCCTCAGCGATTCACGTCCCGTGCGAAACTTGTAAGTCACGTACGCACACACGCCGGCGATAGGCAATATCCGTGTAAACATTGTGATAAGAGCTTCGTGAAGTCACACCATTACACAAGACATCTTCGCTTAAAACACCGCGACAAcattcgcttgagtcgcggaacTTTCGGTCACCCGGACCAATACCGCTGCGAGCAGTGCGACGATAGTTTTACCACCCAGGACGAGCTCATCTACCACTCGGCGATACACGCCACGCAGAATCTCACCTGTCCCCTCTGCCAGGAGAAGTTTGACAATGTTGACGCTGTCACTACACATATCAAATCTCATGTCAATGGTATAGAATTTATGTGCGACTTCTGCGAATTAGTATTTACCACAAAAGCAAAATTGGATAGTCATATAGAAATGGCTCATGAAgatgaatttaataatGAACTAGAACAAGATGAATCTTCTATAGATATGGATGCagaagatgatgaagatgacaaTAGTATTAACGtCAAAGATGAAGGAGATCATAtggtaatagaaattaaaaaagctgATGATTATATGCTGAATAATACTCCAGGAGATTCAGAGGAAAAATGCGACAACACTAATTCAGATGaTAGTGAAGCGGAGGTAACATACACAGAATTATCAACAGTGGATACATTAGCGATAATCAAAAAGGAATCACTAAATACATCAGAGGAAAATCCATCAAATTTCACATTTACTTCAGTGTCTAGTGTGATGCCAGCTATAGCTAAAAATGATCAGACCAATGATACACAAACAACTGAGATCACAAAAAAAGTTGAGGAAATTGAAGGAAAACAAATTGAACAACAGTCTGCAGATACAGaaaagaaaaaaaaaacaaaagctgaCAGTAATGTTAGTGTTGGTGCAAGCAATAAATCTCTGCAATTGTTAGAAAAGGAACTGCAGGAATTGAAACGGACAAACAATACaagaattgatataaataaagctCCAGCAAAATCAACAGAACCAAACAGAGGTAGACGGCCACTACTTCATACGTCAACTcctaaaataaaATCTGCGGATGAAAAGAGAACAGTCATAGGTACAAAATCGCCTGTAACCGAAAAGAAAATTCAAGAGCGTCGTACAATAACCAAAGAAAACAAAGAACCGAAAGAAATAAAAGCTTCTAATAGCAGCATTAAAGAAGATAAAGACATTAAAGAAAGGGCCACTACACCCACACCAAAGagtgttataaaaaatggaaatgaGAAAAATTTAACAGACGAAGGCATACGTCGTTCAACACGACCGTCCAAAATTAAAGATTATGCGAAAATGATTCGGGAcagATCTCACCCGGAGGAGGAAGATACTGATGATGGTGACGACGAAGAGTATAAGGCTGAAAAGACACCAGAGaggACAAGAAGCCGTAAAATTACGAAGACTAATCCTAAAATGATCCAACCCGCTGTAGCAAGTACATCTAAAGTTATACACACACCGCCAGCGCCTACTACAAGAAAACGAGGCCGACCGCGTAAAGAAGCAACAAAAGAAGTGccgttaaaagtaaaaaaggatGGTAATGAAAcaaatgaagaaaatatttcaaacaagaTAGAATCAGAAGAGTCTGGTTCAACTAAAGATTTACAAGTTCTTGATGATAAAAATGATGTGGCGGGAAAGAGCAGTAATTATTCCGAATATTCCTCTGATGAAGCGAAGGCAAGCAATACTGAACGAGTACCAAATACTACTGGGATACTGGTTTCTCCTACAGGTCGTACTCTAAAAAAGgttcCAGCTCAAGCGCTACCACCCGGTGTAAAACCATTACTTTTACCATCAACTGCACGgcCAATAACAACAGGCGAGTTGAGTGAAATGAAAATTGGCAAGAGAATGGTTAAAGTACAGAAAATCGTAATGACCAAAGCTGAAGTGGAGGCTATGGCGAAGAAAGGACTTGTGGAAATGAAGgatGGCACCATGGTTCTAAAGCAAGGCATAAAATTACCTACATGCGACCCTGCAACACTTAAATCCACACTAATCGGCGAAGCAGATGGACGAAAAGAATCTccacaaaaaaaggaaaaggcGACACCCAGCAGATGCAATCTTGATGACGATGCATATTAA
Protein Sequence: MEKRKESLSALKLCRFCLTENESLGCLYNKHRSDRNSVDFPLKILSCVSIEVFPSDKMPSFMCDHCQFFMDLFYQYKQMVRRADENILNYIRNGTELESVPWPSSLITVYQESIQHGVVKTIVEGGATVHVSTHDGSDSDDEEDENVFNVTIADGSDDGSKGTCIKVVTSKDNKDSSNKQDSKDGNIVEIKEKVVEEISGSLNNGCWPCLQCDCTYPLQQQLELHKKRKHRERMVRCDHCDAKFFNKYDLATHQVRHSEDQPLKCVACDKTFKLLYSLKHHQKVVHSELLKKVCPKCPATFLNDKELEVHKRKHHLYPRILYGYGCGRKYSNKASLDRHKKLMVSKDHYSCEYCPQRFTSRAKLVSHVRTHAGDRQYPCKHCDKSFVKSHHYTRHLRLKHRDNIRLSRGTFGHPDQYRCEQCDDSFTTQDELIYHSAIHATQNLTCPLCQEKFDNVDAVTTHIKSHVNGIEFMCDFCELVFTTKAKLDSHIEMAHEDEFNNELEQDESSIDMDAEDDEDDNSINVKDEGDHMVIEIKKADDYMLNNTPGDSEEKCDNTNSDDSEAEVTYTELSTVDTLAIIKKESLNTSEENPSNFTFTSVSSVMPAIAKNDQTNDTQTTEITKKVEEIEGKQIEQQSADTEKKKKTKADSNVSVGASNKSLQLLEKELQELKRTNNTRIDINKAPAKSTEPNRGRRPLLHTSTPKIKSADEKRTVIGTKSPVTEKKIQERRTITKENKEPKEIKASNSSIKEDKDIKERATTPTPKSVIKNGNEKNLTDEGIRRSTRPSKIKDYAKMIRDRSHPEEEDTDDGDDEEYKAEKTPERTRSRKITKTNPKMIQPAVASTSKVIHTPPAPTTRKRGRPRKEATKEVPLKVKKDGNETNEENISNKIESEESGSTKDLQVLDDKNDVAGKSSNYSEYSSDEAKASNTERVPNTTGILVSPTGRTLKKVPAQALPPGVKPLLLPSTARPITTGELSEMKIGKRMVKVQKIVMTKAEVEAMAKKGLVEMKDGTMVLKQGIKLPTCDPATLKSTLIGEADGRKESPQKKEKATPSRCNLDDDAY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -