Basic Information

Insect: Teinopalpus imperialis
Gene Symbol: -
Assembly: GCA_029286865.1
Location: JAGSMU010000008.1:6827450-6845218[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3.4e-05 0.0038 18.4 1.5 1 23 201 223 201 223 0.99

2 13 0.045 5.1 8.6 2.6 1 23 231 254 231 254 0.93

3 13 2.1 2.3e+02 3.4 0.4 1 23 258 281 258 281 0.87

4 13 7.4e-05 0.0083 17.4 2.6 1 23 356 378 356 378 0.99

5 13 0.0063 0.7 11.3 1.3 2 23 387 409 386 409 0.96

6 13 0.41 46 5.6 4.4 1 23 413 435 413 435 0.98

7 13 0.00015 0.017 16.4 4.0 1 23 440 463 440 463 0.98

8 13 0.041 4.6 8.7 1.6 3 23 469 490 468 490 0.95

9 13 0.074 8.2 7.9 0.3 2 19 510 527 509 530 0.93

10 13 0.43 48 5.5 0.2 2 23 575 597 574 597 0.90

11 13 2.4e-06 0.00027 22.1 1.3 1 23 606 628 606 628 0.98

12 13 8.5e-05 0.0094 17.2 1.1 1 23 634 656 634 656 0.97

13 13 5.1e-06 0.00056 21.0 0.8 1 23 662 685 662 685 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3.4e-05	0.0038	18.4	1.5	1	23	201	223	201	223	0.99
2	13	0.045	5.1	8.6	2.6	1	23	231	254	231	254	0.93
3	13	2.1	2.3e+02	3.4	0.4	1	23	258	281	258	281	0.87
4	13	7.4e-05	0.0083	17.4	2.6	1	23	356	378	356	378	0.99
5	13	0.0063	0.7	11.3	1.3	2	23	387	409	386	409	0.96
6	13	0.41	46	5.6	4.4	1	23	413	435	413	435	0.98
7	13	0.00015	0.017	16.4	4.0	1	23	440	463	440	463	0.98
8	13	0.041	4.6	8.7	1.6	3	23	469	490	468	490	0.95
9	13	0.074	8.2	7.9	0.3	2	19	510	527	509	530	0.93
10	13	0.43	48	5.5	0.2	2	23	575	597	574	597	0.90
11	13	2.4e-06	0.00027	22.1	1.3	1	23	606	628	606	628	0.98
12	13	8.5e-05	0.0094	17.2	1.1	1	23	634	656	634	656	0.97
13	13	5.1e-06	0.00056	21.0	0.8	1	23	662	685	662	685	0.98

Sequence Information

Coding Sequence: ATGTATGCTGATATATCAGgtcACAAAAATGCTATTCAGATAATTGACCGTAAGCTTATAAACATTATGCCATCCCTGTCTTATGTAGACATCAATAGAACACATTATGAACAGGTGAAGTTTCAATGGGTGAAACATAGCCGTTGCAGTAATGTTAAAGGTGAAATACCTATTGTGCATTACAATACAACAGACACAATTGAAATCGAAGTTCCCAGAAAGAAAGTTAAATCAAATAATGCCAATGCCGCTATAAAAACAGAAGTAGATGACTTATCTACTGATCAAGAATTCAGTACAGCCATTTTACATGATTCAGATAATGATCACAAGGAATCAGATAGTTTTGATCAATCAACACCACAAGAGGCCGATTTTTCCAATGacgcaaatatatttcaagaatTTTTCACCAGTAACGATAATGAAAATGAATACAACATGTATATCACTCCACAATGTAAAGAAAATGATGAGGTAAAAAAAGAGGAAGAAATCGATGGTTGTAATTTAGATGAGGAGTATGCTAGTATTGTACCAATATCTATGAAAGAAGCAAAGGCTGCAGTGGAAGTGTACAAAATGTTTAGTCATGGCAAATATTCTTGTAATGTTTGTACAAAAGCATTCTTTAGTGAGAATCGATTGACAAGTCATATGCGAATGCATGATAAGCATGTAAGTGGCACTTTCTTCTGTGAgctgtgtaattattattataaaacagactTTCTATTGAAAACTCATATGACTGAgaaacatatgtataaatatatatgtagaaaatGTCCAGAAGTAAGTTTTGATAGAACATCGGCCAAACAGCATTTCATTTGGTCACACCTGCAAAAAGGGAACAACAAAGATGCCAATTGGTACGAATCCCGTCCGACCTGGCTTAACAACAAAGGTGGGAAAAGACTCAAAGGCGTTGTATCCCTTCGTCCAATTAGAAGAATGAAAAAGTTACCAGAGGACTTCTTGGTATACTCTCCGATATCACAAGAGGAGCAATATAGGCTGGTTCAGGCTAGACAAAGAACTATGAATTATTTGGAAGCCGAGTTCAAGTGTGAGCTGTGCTATAAAGGTTTTAGGGAGAATGGAACATACAGCAAACATATGAGAAAACATGACCCAGCGTTTGCAGGCAACCTTCAATGCGACGTGTGTAAGATATACTTCAAGGATACGAGGAAAATGTACAAACATATGAACATcactcatttatttaaatactcatGTCAACTGTGTAgttatgtatgttataataaGGGCCAAGCGCACTTGCACTATCGTTGGCATAAAAACGTAACATATCAGTGTCAGCACTGCAACAAAGAATTCAAAAAGGCGTCGACGCGTCTAACACACATACGGATAAAGCACCCGTCGACCAATATCTGCAATCTGTGTGGACACAGCTTCGTTAGTGAGACTGGCTTGTATTGCCACCAGAGAATAGCGCATAGTAAAgaggaAATAGAAGTAAGTGAAGGGATTGAAGTTAATGTAAATGATCCTCTTTATTGTGCTGATTGTAAAATACAGTTTAAGAACGAGGAGGCGTTCAAAACACACTTTGGTAGCTCAAAGAAGCACTCGACTACTAAtctttcCATCGTCAATAATAATCAGTCGAAGAGCGTGCAAACTAAGAAGAGGAAAGGCAATCGTCGTGACACGTCCGTAATTATTAACAACGGATTGCCGACTTCTACACAGTGTGAAGTGTGTGAAAAATTCCTCACCAACGACGTGCAAGCACGCAAACACTACGAGGCGGAGCATCCCGGCGTGGAATTCCTCAAGCGATACATGTGCGATGTATGCGGACACACTACTAAGCAATATGCAAACCTGATGGTTCACATGCGCACACACACGAATGAGAAACCCTACCAGTGCCCCCACTGCGAGCGACGCTTCAGTATGCCCAGCAACCGCGACCGACATCTTGTTGTACACACCGGTGAGAAGCGCTATCAATGTCAGCTGTGCAACCGTCGCTTTACCCAGAGCAGTGCCGTCAAACTGCACATACAAACTGTGCACCTCAAGATACCGTACGCGCCGTGGGACAAGAAGAACAGaaAACGCCGCCGTGAAATGGAAACAGCATCCCTGCCAGTTATGCAGCCTCCCTTGCAACATAAAGTCATCATAGAAACCAACACGGATTATCTCAACGCTTACATTTCTTATAACGACGAATGA
Protein Sequence: MYADISGHKNAIQIIDRKLINIMPSLSYVDINRTHYEQVKFQWVKHSRCSNVKGEIPIVHYNTTDTIEIEVPRKKVKSNNANAAIKTEVDDLSTDQEFSTAILHDSDNDHKESDSFDQSTPQEADFSNDANIFQEFFTSNDNENEYNMYITPQCKENDEVKKEEEIDGCNLDEEYASIVPISMKEAKAAVEVYKMFSHGKYSCNVCTKAFFSENRLTSHMRMHDKHVSGTFFCELCNYYYKTDFLLKTHMTEKHMYKYICRKCPEVSFDRTSAKQHFIWSHLQKGNNKDANWYESRPTWLNNKGGKRLKGVVSLRPIRRMKKLPEDFLVYSPISQEEQYRLVQARQRTMNYLEAEFKCELCYKGFRENGTYSKHMRKHDPAFAGNLQCDVCKIYFKDTRKMYKHMNITHLFKYSCQLCSYVCYNKGQAHLHYRWHKNVTYQCQHCNKEFKKASTRLTHIRIKHPSTNICNLCGHSFVSETGLYCHQRIAHSKEEIEVSEGIEVNVNDPLYCADCKIQFKNEEAFKTHFGSSKKHSTTNLSIVNNNQSKSVQTKKRKGNRRDTSVIINNGLPTSTQCEVCEKFLTNDVQARKHYEAEHPGVEFLKRYMCDVCGHTTKQYANLMVHMRTHTNEKPYQCPHCERRFSMPSNRDRHLVVHTGEKRYQCQLCNRRFTQSSAVKLHIQTVHLKIPYAPWDKKNRKRRREMETASLPVMQPPLQHKVIIETNTDYLNAYISYNDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01115908;
90% Identity: -
80% Identity: -