Basic Information

Insect: Teinopalpus imperialis
Gene Symbol: -
Assembly: GCA_029286865.1
Location: JAGSMU010000049.1:3214058-3223771[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.2e-06 0.00035 21.7 1.7 1 23 266 288 266 288 0.98

2 9 3e-08 3.4e-06 28.0 1.6 3 23 296 316 294 316 0.98

3 9 0.0001 0.011 16.9 0.3 1 23 322 344 322 344 0.98

4 9 1.1e-05 0.0012 20.0 1.7 1 23 350 372 350 372 0.99

5 9 2.3e-05 0.0025 19.0 1.7 2 23 553 574 552 574 0.96

6 9 2.9e-09 3.3e-07 31.2 1.6 1 23 580 602 580 602 0.98

7 9 0.0025 0.28 12.6 0.6 3 23 610 630 608 630 0.97

8 9 6.4e-05 0.0071 17.6 1.5 1 23 636 658 636 658 0.99

9 9 0.02 2.2 9.7 0.8 1 23 664 688 664 688 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.2e-06	0.00035	21.7	1.7	1	23	266	288	266	288	0.98
2	9	3e-08	3.4e-06	28.0	1.6	3	23	296	316	294	316	0.98
3	9	0.0001	0.011	16.9	0.3	1	23	322	344	322	344	0.98
4	9	1.1e-05	0.0012	20.0	1.7	1	23	350	372	350	372	0.99
5	9	2.3e-05	0.0025	19.0	1.7	2	23	553	574	552	574	0.96
6	9	2.9e-09	3.3e-07	31.2	1.6	1	23	580	602	580	602	0.98
7	9	0.0025	0.28	12.6	0.6	3	23	610	630	608	630	0.97
8	9	6.4e-05	0.0071	17.6	1.5	1	23	636	658	636	658	0.99
9	9	0.02	2.2	9.7	0.8	1	23	664	688	664	688	0.95

Sequence Information

Coding Sequence: ATGACACCCCACATGTGGAGCCATCCGGCCGAAGATACAAGATTTAAGCCCGCACCGCACGTCATTAAAACCTCGCTGTCAAGAAGAAATCATTTGGACGTGTTTCCTCTCGCATTATTTATCCGGAGGCCCGATTATAAACAGATGTTATGCTGCCATAAATCTTTGTCTCATGGCTCATATACGACAGCTCCGTACGTGCTGTACAAAGATGGAGTGGAGCGTGCACCACCTGGAACGCAATGGGGCAGTGGAGTCCTCGATGGCGGCTATCAAACAATGCAGCACCAAAGTCCCAGCGGACCGTCGCCACAGCCTGAACCGCAACTTGCATCACCGGCACCATCGCCTTATCCGCCAGCTCCTCCACCCCCCGACCCCACAAGTGCAGCCGAAGACGCAGCTCAACAACTGGCCCAGCAACAGGCACAACAACAAGCACAACAGCAGGCGCAACAACAACAAACCTCACCTGACCACATGCAGGTTGAGCAGCAACTGCAAAACCAAGGGCAACCACAGCCTAACCAAGATCACTTAGATCGAGGACCATGCTTCGTACAGCCAGATTTACAACAGCAATACACcccttatttcaaagaaacaagACCAACTAGTCACATGTTAGGGACTGGCGGATTTCCATTGCATTACCTAAAACAGAACGGTGGCGTGTTGTCTTTAGAAGGTCCGCTTGACCAATACGGTGCGCCGGACTTGCGTCACTTACCAGACATAGTTCAACCTGAGCCGCCAAAGCCAAGGAAACATAATCCCAACTCTGAGCTGCGGCTTTTCAAATGCCTTACATGTGGGAAGGATTTCAAGCAGAAGTCGACGCTTCTGCAGCACGAACGAATCCACACAGACTCGCGGCCGTACGGATGTCCGGAATGCGGCAAGCGGTTCCGCCAGCAGTCTCACCTCACCCAGCACCTGCGCATCCACGCGAACGAGAAGCCGTACGCGTGCGTCTACTGCCCGCGCTCGTTCCGGCAGCGTGCGATCCTCAACCagcacctgcgcatccattccGGTGAGAAGCCCTATACGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGGCGAGCGATATTCACACATATATGCCCCGGTCCGCTCCCCGCGCGCGCTGTTCGCACTCACGCGAAGCTTCGCGTCGGTGCGAACGCCGCCCGCGATCCCGCCGCCCTTACCTCGTTCGATTCGGTCTCGCACCCATTGGCCTTCCTATCAGTCTATCAGTCAAATTCTCGGTCCCCTTGTCGCCCGCGCTGCGGAGCGCTCGCGAGACGCGGAACCGATCGCCGGACGCTCCCACGTCTCTCCGCATCTTATCTTTAAGAACGGGACGACACCCACACTGTGGCCCCAGGATGTGCCGTATCCACCGGATGAAAACAAAGAGGAAATCCAATCAACTTTTGGTGATGCTGACGGGCAGAATGGAGAGCAACGGGGCTCATGCTTCTCACCAGGCGACACAGCGCAATACCCAGCATATTTCAAAGATACAAAAGGTCTCAATCATGCCGTTTTTGGCTCAAGCCTTTCTCTACAATATCTGAAGGGTGGTAAATTGCCCGACGTGTTAGGAGGTCGTCCGATGCCGTTATACGTTCGCTGCCCTATCTGCCAGAAAGAGTTTAAGCAAAAGTCAACGCTGCTACAGCATGGATGCATACACATAGAGTCCCGGCCGTACCCTTGCCCCGAATGTGGCAAGCGCTTCCGGCAACAATCGCATCTAACGCAACATTTGCGCATTCATACTAATGAGAAACCGTACGGCTGTGTCTATTGCCCACGCTTCTTCCGACAACGGACAATACTTAACCAGCACTTGCGCATCCACACCGGCGAGAAGCCATACAAATGCACGCAATGCGGCAAAGATTTCAGGCAGAAGGCAATCTTAGATCAGCACACACGCACGCATCAAGGCGACCGGCCGTTCTGCTGTCCGATGCCGAATTGTCGACGACGCTTTGCCACCGAACCAGAAGTGAAGAAACACATCGATAACCACATGAACCCGCACGCGGCTAAAGCGAGGCGAGCTGACGCGAAGACCCCCCGGCCACTTCCTCCAGCGGCAGCTGTTGTTAAACCAGAACTTTACTTCCCTCAGTGCTATGCGCCGCCTTTCCAACAGTTCCCAACAGGAGGCGAGTTCAAGCCGGCAGTAGGCCCTGGCGCGCCGGTAACGTGCTTACCGGCTCAGTGA
Protein Sequence: MTPHMWSHPAEDTRFKPAPHVIKTSLSRRNHLDVFPLALFIRRPDYKQMLCCHKSLSHGSYTTAPYVLYKDGVERAPPGTQWGSGVLDGGYQTMQHQSPSGPSPQPEPQLASPAPSPYPPAPPPPDPTSAAEDAAQQLAQQQAQQQAQQQAQQQQTSPDHMQVEQQLQNQGQPQPNQDHLDRGPCFVQPDLQQQYTPYFKETRPTSHMLGTGGFPLHYLKQNGGVLSLEGPLDQYGAPDLRHLPDIVQPEPPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQGERYSHIYAPVRSPRALFALTRSFASVRTPPAIPPPLPRSIRSRTHWPSYQSISQILGPLVARAAERSRDAEPIAGRSHVSPHLIFKNGTTPTLWPQDVPYPPDENKEEIQSTFGDADGQNGEQRGSCFSPGDTAQYPAYFKDTKGLNHAVFGSSLSLQYLKGGKLPDVLGGRPMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKARRADAKTPRPLPPAAAVVKPELYFPQCYAPPFQQFPTGGEFKPAVGPGAPVTCLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01078408;
90% Identity: iTF_01130195;
80% Identity: -