Basic Information

Insect: Teinopalpus imperialis
Gene Symbol: -
Assembly: GCA_029286865.1
Location: JAGSMU010000011.1:3795607-3807515[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 2.4e-06 0.00026 22.1 0.5 1 23 202 224 202 224 0.98

2 25 0.0023 0.25 12.7 0.7 2 22 259 279 258 279 0.93

3 25 4e-05 0.0044 18.2 0.6 3 23 312 333 310 333 0.95

4 25 1.7 1.9e+02 3.7 0.3 2 13 353 364 352 371 0.84

5 25 0.00063 0.07 14.5 1.1 1 23 383 406 383 406 0.97

6 25 0.00097 0.11 13.9 0.1 1 23 423 445 423 445 0.96

7 25 0.00012 0.013 16.8 2.9 2 23 483 504 482 504 0.97

8 25 0.00015 0.016 16.4 2.0 2 23 547 569 547 569 0.97

9 25 3.4e-05 0.0038 18.4 0.9 1 23 619 642 619 642 0.97

10 25 0.0086 0.95 10.9 0.2 1 23 698 720 698 720 0.97

11 25 0.011 1.3 10.5 6.0 2 23 732 753 731 753 0.96

12 25 0.058 6.5 8.3 1.9 2 23 765 786 764 786 0.96

13 25 0.021 2.4 9.6 1.2 1 23 796 818 796 818 0.98

14 25 0.00033 0.036 15.4 6.4 1 23 846 868 846 868 0.96

15 25 0.00018 0.02 16.1 1.8 1 23 879 901 879 901 0.98

16 25 0.0012 0.13 13.6 1.3 1 23 909 931 909 931 0.96

17 25 0.001 0.11 13.8 0.1 2 23 951 973 950 973 0.97

18 25 1.7 1.8e+02 3.7 0.4 1 23 991 1013 991 1013 0.85

19 25 0.16 18 6.9 3.8 2 23 1021 1042 1020 1042 0.97

20 25 0.00096 0.11 13.9 1.0 2 23 1053 1075 1052 1075 0.95

21 25 2.7 3e+02 3.0 5.4 2 23 1092 1110 1092 1110 0.88

22 25 1.7 1.9e+02 3.7 1.6 2 21 1114 1133 1114 1134 0.93

23 25 0.17 19 6.8 0.4 2 23 1183 1204 1182 1204 0.93

24 25 0.00073 0.081 14.3 0.5 2 23 1215 1237 1214 1237 0.96

25 25 1.5 1.7e+02 3.8 4.1 2 19 1275 1292 1274 1295 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	2.4e-06	0.00026	22.1	0.5	1	23	202	224	202	224	0.98
2	25	0.0023	0.25	12.7	0.7	2	22	259	279	258	279	0.93
3	25	4e-05	0.0044	18.2	0.6	3	23	312	333	310	333	0.95
4	25	1.7	1.9e+02	3.7	0.3	2	13	353	364	352	371	0.84
5	25	0.00063	0.07	14.5	1.1	1	23	383	406	383	406	0.97
6	25	0.00097	0.11	13.9	0.1	1	23	423	445	423	445	0.96
7	25	0.00012	0.013	16.8	2.9	2	23	483	504	482	504	0.97
8	25	0.00015	0.016	16.4	2.0	2	23	547	569	547	569	0.97
9	25	3.4e-05	0.0038	18.4	0.9	1	23	619	642	619	642	0.97
10	25	0.0086	0.95	10.9	0.2	1	23	698	720	698	720	0.97
11	25	0.011	1.3	10.5	6.0	2	23	732	753	731	753	0.96
12	25	0.058	6.5	8.3	1.9	2	23	765	786	764	786	0.96
13	25	0.021	2.4	9.6	1.2	1	23	796	818	796	818	0.98
14	25	0.00033	0.036	15.4	6.4	1	23	846	868	846	868	0.96
15	25	0.00018	0.02	16.1	1.8	1	23	879	901	879	901	0.98
16	25	0.0012	0.13	13.6	1.3	1	23	909	931	909	931	0.96
17	25	0.001	0.11	13.8	0.1	2	23	951	973	950	973	0.97
18	25	1.7	1.8e+02	3.7	0.4	1	23	991	1013	991	1013	0.85
19	25	0.16	18	6.9	3.8	2	23	1021	1042	1020	1042	0.97
20	25	0.00096	0.11	13.9	1.0	2	23	1053	1075	1052	1075	0.95
21	25	2.7	3e+02	3.0	5.4	2	23	1092	1110	1092	1110	0.88
22	25	1.7	1.9e+02	3.7	1.6	2	21	1114	1133	1114	1134	0.93
23	25	0.17	19	6.8	0.4	2	23	1183	1204	1182	1204	0.93
24	25	0.00073	0.081	14.3	0.5	2	23	1215	1237	1214	1237	0.96
25	25	1.5	1.7e+02	3.8	4.1	2	19	1275	1292	1274	1295	0.92

Sequence Information

Coding Sequence: ATGGCCCTCAAGCTCGGAAAATGTAGGCTTTGCCTTAAACTCGGCGATTTTTACTCTATCTTTACGATGGATAACAACGTGCAGCTCGCTGAAATGGTCATGGAATGCTCCCAAGTGAAGGTATACGAGGGAGACGGACTACCTGACAAGATTTGCTCGGAGTGCATTCAAAAGTTGAGCAGCGCGCATATATTCAAGCAGCAGTGCGAGAGGACCGACCAGGAGCTGAGAAGGAACTACTTGCCACCGCCGGGTTTCGGCGACATACCGTCACCACTACCGAACAGGCAGAGCAGCGACTCCGCTTTCTCAAACCATACGGACATATCCAGTAACAACAAACCCACACCCTCGTCGACGGAAAAGGTTTCGCCCGGTGGTCGAAGTAGAAAACGCAGCCGAGTCAGTTTAGACAATGCATCATACACCAGCCATTCCCACAACATCAGGCCTACTTCCACCAAGCGGGTTGAGGAACTCCGAGTCTCCGAGAAAAGGCCAAGAAAATCTCGAGCATCTTACATAGAATCGGATTACGACGACAACAGTGCTTCTCATTTCTCGGTCGAAACAGATTCCGACGAACCTCTAATGAAGAGTGAATTTAAATGCAAGATCTGCGGCAAAGCGTTTGCCTCGCAAAAGAGTGTGAACGCACACACCAAAGTTCATTCAAGGAAAACCCTAATGAAAAACGCATTTGTCAACATTCCAAAACCGATGGTTGACAACACAGACAATATGAAGGATGCCATGGACGTTGAGGACAAACTATCGTGTGACAGGTGCGAGAAGACATTCAAGTTAAAGATAATGTTGAAGCGACATCAGGAGACTTGTGGGAAAACTCCGCCGAACTCACCGATGAAGGAGTTACATGTATCGTTGGAGCCGATCGACGGGAGCACCCAGCAACCTAGCAACAAGATAGACTGTGAATTGTGTACCACTAAGTTCAAAACGACCGAGAACCTGGAAAAGCACATGAGGTTGGTCCACGCTGCCGTCCTCAAGCGGGATAAACATGAGAAAATTGTAGAAAACGGAATCAGTGTGCCTTGTTACTACTGCGGACAAGTTTTCGATGACTACTACCTCCACAGCTCTCACTTCGACACCTGCTCCCAGAAGGACAAATCGGTTACATTCACTTGTCCAATCTGTAAGAAGGTGTTGAGCAAGAAGAACtcctattttattcatttaaagaaTATCCATTTCAATCCACGTTGCAATAAGAATGAGAACCGTTCTAGAGAAGTTTTTTTTGAGTGTCGCATATGCAGTAAGAAGCTGGCGACGCAGGATCAGCTCATTACTCACCTCGCTGCTCATATGTCCAACATTGATGATGTCGTGGAAGACGATTCTGGGTTAGATCCAGTTCAAGACAATAATTCTGTCGTATCAAGCTACAGTAATTCGCATGTATCGACCGGTCCGTTGAAATGTAGCATGTGCGACAAACGGTTCACCTATAAAAAATCACTGCTCACCCATGAACAGAAGCATCTCTGTGCTGATATTGACATAAAGACCGAACCGGTGGAGAAAAACGTGTCCAGCAGCAGCGCCCAACTGAGCGAGTCATACCAGCAATCAGAGTCAGAATCTAGTCAAGAAGAAGGGGACGACAATACGTGCGATATTTGCGAGAAACAATTCTCTTACAAACGTCTCCTAATACAACACAAGCGTACCAAACACAACATGAGCTCGGGAACGAAGCGTGCGAAGATCAACCTCAAAGATTGCTCCGTACGGTGTCTGATTTGCGACATAGAGATGAAAGTTAGCGCTATAAATGAGCACAATCAGAAGCATATATCGGTGAACATTAAACCTAGGAACCTGTACACATGTGCTGAGTGCGAGGAGACATTCAAGAGCTGCAGTTCACTCGCAAATCATATCAAATTGGTGCACAGGTTAAAACAGCCGCCGTCTACAAAGATGCAAGATACAGAGGTGGCGGATTTTTGTGAAGTCGTTGTGACAAAGGCGGAACCCCTGGATACAAACCAGAGTTGCAACGACGTAGAGACGGTTCCGTCGGCTCGGGAGAGGGGCCCGTTGGTTAATTTGAGCGGGTTCACCTGTCCCATATGTAGAAAGCAGATGCCCACGTTGATATCGCTCAAAAGGCATGTCAATTGGCACGCGAATGTCGGCAATAATATTGAGAAGAAGCTAGAGTGTTTCGTTTGCAAAGAGACATTCCGGTTTCAATGCCACTACCGACTGCACATGCGCGAACATTATAATGACACGAACCTTGATCCGGTACTGCTCACTTGCACCATTTGCAACAGAAAGAGCAAGCACCTACGCGCCGCGCAGGCGCACATGAACTTCCATAAGCAGACACGATTCAAGAACAAGGACTACCGGTGTTCGATTTGCAAGAGAATTTTCCAGTTCAGAAAAGTATATCTCTCCCACATGGCGATTCACTACAAACGTGGCGAAAGCATTAACACCGGAGTCGGCTACGTACTGCCTAATACCTCGGACAAAACCGTATTCGATGGTACACATACATGCCATTACTGCGGAAAAGTTTGCGACTCGCAGGTCTCCCTAAAACACCATATCATATGGCACAAATCGAAAACCTCTCTATTCGGCGCCCGCCACGAATGTGACATTTGCAATATCCAATTCACCAACAAGAGGAGGTTAGAGCTGCACGTCAGAACACATTATGAGGATGACAACGGTCCATTTAAATGCAACATTTGCGGCAAAGGTTTTATTGACGAGGATTATCATAGAAAACATGTGAAAGGGCACAACTTCGATCATCAATCGCACAAAGCAAGGATAGAGAATCTCAGAAAAGATAAAGTCAAGTGTCCCATTTGCGCCCGCTTCTATCCAGACTTGGTGAAACTCATACGCCATTTGCGTCGAACTCACCCCGagagcaaaatgataaagcccGATCCCGATGCCCCTATGCAGAACTATTACTCATGTAAGTTATGCGCCAAAGTGTTCTTAGACGAACGAAGATTGCGATACCACGAGGAGGCACATATGCGGAAACCAGAGTTCTTGAAGTGCAAATTCTGCGGCAAGAAAACGATCTCCTTAAAAAATCATCGAATCCACATAAAATCTCACTTAACTCAAAAATACACAGATGAGCCTCTGAAGTGCAAGCATTGCGACGAGACCTTTGTCGCGTTCAGAGAATTGATTTACCATATGAGGGATGTTCATGGCGACGAGAAAGACTGGATCATAATGCCTAAAGAGTCCATTGAAGAGAAGTGCCATAtatgcaacaaaatatttttcaatcttCACAAACACTTGGCATACCATGAAGAGAATAGATGCAAAAAGTGCTCTGAGTATTTCTTCTCTCAAGTTGACTATGACAATCATCTCTGTGCCATTGAGAGCGACGAGGAGGTGGATGAGACCAATGAAAACGATTTGCGCCCAAAATATGAAGAGTGCGCTTTCTGCTTCAAGCCTACTACCAAGAAGAACTCGCAGAGGTTACacaattatatacacaaagtcTCTGGCTCCATCTCGTGTCGTTTCTGCCCTCTCAAATTTAAGACAATCGATGCATTCAACATCCACGCGTTCTCCCACCGAAGCAGAAAATATGATAAGAAACCGATCAAATGTCGACAGTGCGACGAGAAATTCGTGCGTTACGGTCCCTTTATAAGACACATGAAGTCTGTGCATAAGTACACTCAAAAATTGCATTATCGAACAATGGTGAAGCCGGAGCCTTGTGTTGTTTGTGGTGATGACTTTCCCAACCTCCACAACCACTATCGAGCACATCTACAGAACCAATGTCaatactgttataaatatttcacatcaCACAAACTCTTTTCAATGCATGAATGTGATAAGGAGGATTCCGATCCATCCAGAGTGTTCACATGTGAAGAAGACCTTGTAAATCTGATTAATTCCTATGAACCTAAAGATGAGACGGATGATGAAAAGTTCTATGGTCAAACTGAGGACAATGATGAAATTGGTGAGCTGGTGACGGATATTCAGGACAGTGAATACACAACACAAGATGAAGAGAGTCAGAATTCAGCTGATGCAAGTATGCACATGATGGTCCATACACCTATAATATCTGAAGTGCTATCTCTTTACGAAAAAAAGGATGAGGAACAGAACACCATGTCTGACGATGTTGTTATCTTGACAGATGATGATACTTTGGATGGTGAAGAAATTATAACAGTTATAACAATTGATGATGATTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTMDNNVQLAEMVMECSQVKVYEGDGLPDKICSECIQKLSSAHIFKQQCERTDQELRRNYLPPPGFGDIPSPLPNRQSSDSAFSNHTDISSNNKPTPSSTEKVSPGGRSRKRSRVSLDNASYTSHSHNIRPTSTKRVEELRVSEKRPRKSRASYIESDYDDNSASHFSVETDSDEPLMKSEFKCKICGKAFASQKSVNAHTKVHSRKTLMKNAFVNIPKPMVDNTDNMKDAMDVEDKLSCDRCEKTFKLKIMLKRHQETCGKTPPNSPMKELHVSLEPIDGSTQQPSNKIDCELCTTKFKTTENLEKHMRLVHAAVLKRDKHEKIVENGISVPCYYCGQVFDDYYLHSSHFDTCSQKDKSVTFTCPICKKVLSKKNSYFIHLKNIHFNPRCNKNENRSREVFFECRICSKKLATQDQLITHLAAHMSNIDDVVEDDSGLDPVQDNNSVVSSYSNSHVSTGPLKCSMCDKRFTYKKSLLTHEQKHLCADIDIKTEPVEKNVSSSSAQLSESYQQSESESSQEEGDDNTCDICEKQFSYKRLLIQHKRTKHNMSSGTKRAKINLKDCSVRCLICDIEMKVSAINEHNQKHISVNIKPRNLYTCAECEETFKSCSSLANHIKLVHRLKQPPSTKMQDTEVADFCEVVVTKAEPLDTNQSCNDVETVPSARERGPLVNLSGFTCPICRKQMPTLISLKRHVNWHANVGNNIEKKLECFVCKETFRFQCHYRLHMREHYNDTNLDPVLLTCTICNRKSKHLRAAQAHMNFHKQTRFKNKDYRCSICKRIFQFRKVYLSHMAIHYKRGESINTGVGYVLPNTSDKTVFDGTHTCHYCGKVCDSQVSLKHHIIWHKSKTSLFGARHECDICNIQFTNKRRLELHVRTHYEDDNGPFKCNICGKGFIDEDYHRKHVKGHNFDHQSHKARIENLRKDKVKCPICARFYPDLVKLIRHLRRTHPESKMIKPDPDAPMQNYYSCKLCAKVFLDERRLRYHEEAHMRKPEFLKCKFCGKKTISLKNHRIHIKSHLTQKYTDEPLKCKHCDETFVAFRELIYHMRDVHGDEKDWIIMPKESIEEKCHICNKIFFNLHKHLAYHEENRCKKCSEYFFSQVDYDNHLCAIESDEEVDETNENDLRPKYEECAFCFKPTTKKNSQRLHNYIHKVSGSISCRFCPLKFKTIDAFNIHAFSHRSRKYDKKPIKCRQCDEKFVRYGPFIRHMKSVHKYTQKLHYRTMVKPEPCVVCGDDFPNLHNHYRAHLQNQCQYCYKYFTSHKLFSMHECDKEDSDPSRVFTCEEDLVNLINSYEPKDETDDEKFYGQTEDNDEIGELVTDIQDSEYTTQDEESQNSADASMHMMVHTPIISEVLSLYEKKDEEQNTMSDDVVILTDDDTLDGEEIITVITIDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -