Timp021051.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Teinopalpus imperialis
Gene Symbol
ZNF341
Assembly
GCA_029286865.1
Location
JAGSMU010000046.1:1310804-1314858[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.00073 0.081 14.3 0.3 3 23 89 110 87 110 0.91
2 20 0.0039 0.44 11.9 0.6 2 23 136 158 134 158 0.92
3 20 0.00066 0.073 14.4 0.4 2 23 181 202 180 202 0.97
4 20 0.00033 0.037 15.3 0.3 1 23 206 228 206 228 0.98
5 20 0.09 10 7.7 4.6 1 23 233 256 233 256 0.95
6 20 5 5.6e+02 2.2 0.5 2 23 264 286 263 286 0.78
7 20 0.00044 0.049 15.0 1.0 2 23 294 316 293 316 0.95
8 20 0.0024 0.27 12.6 6.2 1 23 322 344 322 344 0.97
9 20 2.5e-06 0.00027 22.0 2.7 1 23 350 372 350 372 0.99
10 20 0.00025 0.027 15.7 2.8 1 23 378 401 378 401 0.98
11 20 0.0011 0.12 13.7 1.3 1 23 466 489 466 489 0.92
12 20 0.00015 0.017 16.4 1.6 2 23 513 535 512 535 0.96
13 20 0.028 3.2 9.2 0.4 2 23 558 579 557 579 0.96
14 20 0.019 2.1 9.8 0.6 1 23 583 605 583 605 0.98
15 20 0.16 18 6.9 2.9 1 11 610 620 610 633 0.84
16 20 0.06 6.7 8.2 0.9 2 23 641 663 640 663 0.94
17 20 0.00022 0.025 15.9 1.1 2 23 671 693 670 693 0.96
18 20 0.0066 0.74 11.2 3.3 1 23 699 721 699 721 0.96
19 20 0.0089 0.99 10.8 3.2 1 23 727 749 727 749 0.99
20 20 5e-06 0.00055 21.1 0.2 1 23 755 778 755 778 0.96

Sequence Information

Coding Sequence
ATGGTGTATCTCCTCCTAGATCTACTGAGTTCAGTCGGTCAACAGAGTCTTGATGGATATGAGCGTAGAGATGACTGTGTGGCAAGAGTGATCAAAATAGAAACGAGACACACAAAACAGGTGAAATTGAAGTTTATATCCAAAACTAAGGCTAGAAGTGACGAGTTCCTCTCTGAGGGGAAGAAAAACCAACACAACTTGAGCATTATCTTGCTTAATTCGAACGCGAATCCAATCAGATGTAAAGACAGCTTAGGATACGGCTGCGCCTTCTGTCCGAAACAGTTCCCGCAACCGACCAACCTAAAGAAACACTTCTTAGAGGAACACAACAGCGACAGGCTTATCAAGTTCATGTCAAGTAAACTATTCGAGAACGTTGTGAAACTTGACATTACATACTTGTGCTGTGCGCTGTGCGACACAGAGTTCGCACAGCTGGACGACTTcgtgaaacatttaaaaaacatacacaACAAAGATCTGTACGTCGATACTAAAAGCCAAATCCTGCCGTTTAGATTTGACACACCGGAGCTGAAGTGTGCCATTTGCACCGCGGAGTACTCCACTTTCAAACTCTTACAGGAACATATGAATACACACTTCGGTAACTATCCGTGTAAGGTATGCGAAAGGAGTTACGTAACCGAGAGACTCTTACAAGGTCACGTCAAACGTCACGGGAACGGTGAATACAAATGCACCCAATGCGCCAAAACCTTCACGAGCATATACAAGAGACGGGAACATGTTCACAGAACCCATCTAGGGTTCAACAAGAGAAACAAATGCCAATTCTGCGATGAGAGGTTCCTTGACTATTGGAAGAAAATCGACCACATGGTGAAGATCCACGGTGCTCCCCCTGTAGTGTTGCAGTGCCAAGCGTGCGAGCGCACATTCAACAATCAGAGAGCCTTAGCGAGGCACAAGAAGAAGGATCACTTACTGGAAAAACGGCACAGCTGTTCAGAATGTGAGATGAAATTTTTCAGTAGCAGTTGCTTAAGGAAACACATGGTCAAGCATACGGGCTTGAGGCAATACACGTGCGACGTGTGCCACAAGTCCTATGGAAGAAAGAACACCCTGAGGGAACACATGCGGATACATACCGATGATCGACGCTTCAAGTGCTTGTACTGCGGGCAGGGATTCGTGCAGAAGTGCAGCTGGCGTGGTCACATGCGCTCCAAGCACGGTGAGCAAAGCAAGAAAATAAGCAAAGCATTCGTGAAAACTGCAACAGAAATGGACAAAAAACAATCTAATCATTTGCAAAATGAAGCCGAGCGAAAACCGCCGAGAGAATTCAAGAAGCACCAGGAGAATCTGAAATGTATTTTGCAATTTTCCAACGCGAGTATGATACGTGGAAAGGACAGCGACGGatacatttgtaatttttgtcctAGACGATACCCTTCGCCACACGATCTCAAGTCGCACTTCCTTCAGGAACACAATGACGTTCAGTCAATGCGGTTACCGAAATTCACGGATTATCTGCTAAAACTCGACATCACCAACTTGAAATGTAAATTATGCACCAAAGTCTTTGAGAAATTGGATCAATTCACTACACATCTGCGAAATGATCACAACAAAATTATGCATAGTGACATAAACAGCGAGATAATGCCGTTCAAATTTGATTCCGAGGCGTTGCGATGCGTTGTGTGCGGTGCAGAGTTCACCAATTTCAAAATACTACAAGAGCACATGCATGTACATTTCAGCAACTACTTTTGCGATATATGCAGCGCCGGGTTCATCTCCAAGCGGCGCCTAGTTGGACACAAGCGACGTCACGGCATCGGAAGCTTCAAATGTGGCCACTGCGATAAAGTCTTCAGTTGCGATCAGAAGCGACGCGATCACGAACAGAGGATTCATCTTGGATTGAAGAAGAGAAACAAATGTAAATTCTGCGACGAGAAATTCGCTGATTACTGGACGAAAATTGATCACATGGTGAAAAAGCATAACGTTCCACGTATGATACTCAAGTGTCAAGCGTGTGAAAGAACATTCGAGAACAAAAGAGCACTGACACGGCACGTTAAGAAGGATCATTTGATGGAGAGGAAGCATGCATGCAGCGTCTGCGATATGCGTTTTTACCTCAAGCATCGTTTGAAGGACCATATGTTGGTGCATACTGGTGAAAAGCAGTTCCAATGTCACGTGTGCTCTCGATGGTACGCGACTAAGAAGTCTGTAAGGCAGCATCTGCGATCTCATGCGGATGACAGGCGCTATGCATGTGGTGTTTGCGGTCAAGCCTTTGTCCAACAGAGTACAATGAAGAATCATATGAGGGCTAAACATGGAGACCTCCGAACATGA
Protein Sequence
MVYLLLDLLSSVGQQSLDGYERRDDCVARVIKIETRHTKQVKLKFISKTKARSDEFLSEGKKNQHNLSIILLNSNANPIRCKDSLGYGCAFCPKQFPQPTNLKKHFLEEHNSDRLIKFMSSKLFENVVKLDITYLCCALCDTEFAQLDDFVKHLKNIHNKDLYVDTKSQILPFRFDTPELKCAICTAEYSTFKLLQEHMNTHFGNYPCKVCERSYVTERLLQGHVKRHGNGEYKCTQCAKTFTSIYKRREHVHRTHLGFNKRNKCQFCDERFLDYWKKIDHMVKIHGAPPVVLQCQACERTFNNQRALARHKKKDHLLEKRHSCSECEMKFFSSSCLRKHMVKHTGLRQYTCDVCHKSYGRKNTLREHMRIHTDDRRFKCLYCGQGFVQKCSWRGHMRSKHGEQSKKISKAFVKTATEMDKKQSNHLQNEAERKPPREFKKHQENLKCILQFSNASMIRGKDSDGYICNFCPRRYPSPHDLKSHFLQEHNDVQSMRLPKFTDYLLKLDITNLKCKLCTKVFEKLDQFTTHLRNDHNKIMHSDINSEIMPFKFDSEALRCVVCGAEFTNFKILQEHMHVHFSNYFCDICSAGFISKRRLVGHKRRHGIGSFKCGHCDKVFSCDQKRRDHEQRIHLGLKKRNKCKFCDEKFADYWTKIDHMVKKHNVPRMILKCQACERTFENKRALTRHVKKDHLMERKHACSVCDMRFYLKHRLKDHMLVHTGEKQFQCHVCSRWYATKKSVRQHLRSHADDRRYACGVCGQAFVQQSTMKNHMRAKHGDLRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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