Timp004858.2
Basic Information
- Insect
- Teinopalpus imperialis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_029286865.1
- Location
- JAGSMU010000008.1:10112026-10123758[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-12 3.1e-09 37.2 0.0 1 38 147 185 147 191 0.91 2 2 4.7e-19 1.3e-15 57.7 0.0 1 43 352 395 352 397 0.95
Sequence Information
- Coding Sequence
- ATGGTCGTGTGCCGTGAAGTTAAGCGCGCCCGAGCGCTGAGCTATCTATGGCTGTTGATATTCGATTGGGCCTACACTATCGCGCTTCGTTTGACAGGGTTTCTCTATTCACTATTGGAACGTAGACGGCCGCAACCCACCAACAGATGGAAATGCACACCGAAGACATTGTCGAACGGCGCTCCTCAGATTGTGCGCGCCGGTGTCTGTTCGTATTGTGTGAGAATCGAGACTAACATTATCTGGCTGGGTGAGGTATGTGACAAGACGCCGGCAGCGAGCGCGTCTCCGACCCTGACGGAGCAGCCGCTCGACCTCAGCGCCAAGTCCACATCCAGTACCAGTGGGACTCCGCCCCCAGAACACAACAACTTGGATAATTCTAGATTAAAACGCGCCGTGCTAGAAAACGCTGGCAACGCGACGCGGCGCACGTACACGGATGACGAGCTCCAATCCGCCCTTAGAGACATCCAATCCGGCCGGCTCGGCACTAGGCGAGCCGCCGCTATATACAGGATACCACGGTCCACACTCAGAAACAAAATCAACAAGTGCGGCCTGACCACTGACCCAGCTCACGACTCCGAGCCCGATAGCGACCCCGAGAGAACCGATTCACCACCTTCTGTGATCCTCAAAATACCAACTTTCCCTCCGCCAGAAGATAAAAGTCCCTCTCCAGCCACACCTATAACTCCGATAACACCTATCATCCCACCCCCACAACCACCAATGAATCCAACCTCTCAACTGCTCCTACCCTCAGTCTTCGCTGATCCTCCGTCTACTCAACACCTCTTCACATCCTTAAGCGACGTCATAGCTAAAAGCATTAGCCAGAAATTCCAACAGCCGCTAGAAAGGCCGCCCCAACCGGACCTTCCTTTCATGAGGGCACCAGATAGACatatatctgtaataaaaaCACCACCAGATAATCAGAGGAACTACGCAGCAGCGAGCAACTCTAGAGCAAACTCGAATAATAACGGGCAATCAGCTACAGGTGGAAAAGGAACGCGCCCCAAGCGAGGCAAATACAGGAACTACGATAGGGATAGCTTAGTGGAGGCGGTGAAAGCCGTACAAAGAGGGGAGATGTCGGTGCACAGAGCGGGATCGTATTACGGTGTACCACATTCTACGCTAGAATACAAAGTCAAAGAGAGGCACCTAATGCGGCCGAGGAAACGCGAACCGAAGCCTCAACAAGAGGCTAAGCCGCAGCCGAAACCGCTTCCAAAACCGGCCACGAAACCTTTCTCAAACGGACTCAACGGACCCGAAGCTTACCCATCAGGGTATCCTTTCTGGGCAGGAGGATTCGCCCCTCCCCCGGCACCGGACCTCTACGCCTCTCATATGATGAGGAGGTTGCGCGACGAAGCGCCGCCAGCAAACGGATCGTTCCTTGAAGGGATTATAAGATCGAGTTTAGAAAGACCTTTGCTCCAGCGATTGACTGAACCTAGAGCTCCAATCGCGACCGCTGAAGCccccagcttgttaagaagacTAGCAGGGGAGCCAGAGGAATCCCCACCTGCGAGAAGGCCGCGCATCGATAGTTCTGATCGACAACTTGCCGCAGAAATGCGCGAAGCTGTCCAGAGACTTAGAGCTGACAAAATGCGCCCGCGGAACGGTACCCCAACCCCCCCGGGCGGATCCCCACCACCGCCCCCGGCCCCGTCAGCGCCCCCCGATCGCGTCTAA
- Protein Sequence
- MVVCREVKRARALSYLWLLIFDWAYTIALRLTGFLYSLLERRRPQPTNRWKCTPKTLSNGAPQIVRAGVCSYCVRIETNIIWLGEVCDKTPAASASPTLTEQPLDLSAKSTSSTSGTPPPEHNNLDNSRLKRAVLENAGNATRRTYTDDELQSALRDIQSGRLGTRRAAAIYRIPRSTLRNKINKCGLTTDPAHDSEPDSDPERTDSPPSVILKIPTFPPPEDKSPSPATPITPITPIIPPPQPPMNPTSQLLLPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLERPPQPDLPFMRAPDRHISVIKTPPDNQRNYAAASNSRANSNNNGQSATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEAKPQPKPLPKPATKPFSNGLNGPEAYPSGYPFWAGGFAPPPAPDLYASHMMRRLRDEAPPANGSFLEGIIRSSLERPLLQRLTEPRAPIATAEAPSLLRRLAGEPEESPPARRPRIDSSDRQLAAEMREAVQRLRADKMRPRNGTPTPPGGSPPPPPAPSAPPDRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01149521;
- 90% Identity
- iTF_00957879;
- 80% Identity
- -