Timp003990.1
Basic Information
- Insect
- Teinopalpus imperialis
- Gene Symbol
- jarid2b
- Assembly
- GCA_029286865.1
- Location
- JAGSMU010000007.1:4634361-4657945[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-16 8.8e-13 49.3 0.0 6 89 684 760 680 760 0.90
Sequence Information
- Coding Sequence
- ATGACACTAATTGTGTTACTAGAAAGATTGAAGGAGACGAACCCCTCACTAATTCAGCTTAGAGCATCTCAACAAAATGTAACACAACCACCACCACCTCCACCACCACCATCACCACCACCACCCGAACCTCAACCATCAACTTCGGGTTATGTGGtcaaaaatataccaaaaatgaAAGCCACCCAAAAGAAGTTTAGTATGTGTCTAAGGTCTAACCCTGGATCATCATCCTCTGCATGTACAGATAGGCTAAGACCCAAAGTGACGAGAATATGCAAACAAAAAGTTGGGATCAACAAGAAAATATCAGGtcctgatgatgatgacaaacCATTAACTTATTTTGCCAAAGCAAAGGAAGTAAACCAAAGGAAATCGAAACCAAAAGAACCTGTTCCCGTAAAAGTGGTAACACAACGTGGCAACAACGCGCCCCTTAAACAAAATTTGCGGAGTAAAGGAGCAGGATCCGGGAGAGCCGAAGTGATGCCTGAATTAGTCATTCCGCCGGTTCGACCACCACCTACCACGCAGTCACGCGGAAACTCGCCTAATGTTTTTCCAgAAGAAGCGGAAGAATCGACTGTTGTACGACCACTGCCGGCTCCAGTGCATTCCGGAACTTCGCCTATCGTTTTTGCAGCAGTATCCGGGAGAGCCGAAGTGATGCCTGAATTAGTCATTCCGCCGGTTCGACCACCACCTACCATGCAGTCACGTGGAAACTCGCCTAATATTTTTCCAgAAGAAGCAGAAGAATCGACTGTTGTACGACCATTGCCGTCTCCAGTGCATTGCGGAACTTCGCCTATCGTTTTTCCAGAAGAAGCGGAAGAATCGACTGTTGTACGACCACTGCCGGCTCCAGTGCATTCCGGAACTTCGCCTATCGTTTTTCCAGGATCCGGGAGAGCCGAAGTGATGCCTGAATTAGTCATTCCGCCGGATCGACCACCACCTATCATGCAGTCACGCGGAAACTCGCCTATTATTTTTCCAGCAGGATCTAGGAGAGCCGAAGTGATGCCTGAATTAGTCATTCCGCCGGTTCGACCACCGCCTATCATGCAGTCACGCGGAAACTCTCCTATTATTTTTCCagCACCAGCCGAGGATAAGGAATACTCACCGCTTAATGATTACCAGGTGTCGCCAGCACCAGCCGAGGATAAAGAATACTCACCGCTTAATGATTACCAGGTGTCGCCAGCACCAGCCGAGGATAAGGAATACTCACCGCTTAATGATTACCAGGTGTCGCCAGCTGAAAGCCTTTCGTCTGGAACTCGTATAACTGATCCAACGGAACTTCGCCTTTATGAGTCAAAACATCAGGATGAGAGACAGAGTGCTGAGTTTGATTCTTCGTTAGctCCAAGCTCATCGTTTGAATATGAAGCAAATCAAGATGTTGAATACGATGTCTCGGATAATGAGGGAGATTACAGAATTCCAAGCCCGTACTTGTATTTGCAAGAAATAGACAAACCGGTTAAAAGAAAAgttaccaaaaaaaatttagataaaacatTCAAATCGCCAAACGCACCGAAAAGGCGCAAAACGGTGCACACCGTCACAGGAGGAACGGCCGCTCAAAGCTCTCGAACGTGTACAGCCAAGAGCTTTAAAATTGGCTCCACTTCACGCcaaacaaatttgaataaaaggAGGTCTAATCAGTCTGCTTCTCATCTTACCGCTATCAagaagacaataaaaaaaaaatgctctgCAAGTGAAGATAATCCTCCGCAACGAAATAGTAGACGGGGACAGTCTAGTTATACAACTCAACAAAATGCAAAAACAAATTCCAATCTAATGAAAGATGCTCCAGTCTTCTACCCTTCAGAGGCAGAGTTTTCGGATCCCATCGCgtacattactaaaattactcCGGACGCTGCTAAGTTTGGAATGTGTAAAATTGTTGCCCCCGAGGGATTTAAACCAAACATCACTTTGTACGACGATGTACGTTTCCATGTCTCTAACCAATATATCTCGCGTTTATTCACACGTTGGGGTCCAGCCTCTAGAGAAATGTGCGCTATTGAAGCACACCTGGCCTCGCTAAACATCAATTTCAATCGGCCACCGTTGctcGAAGGGGTAGAAGTAGATTTACCAAAATTTTATCGTTTGGTAAAAGAGTTGGGCGGCCTAACAGTAATAAATAGATACAAAAAGTGGTCGGCTGTGGCTGAAAAAATGCGCCTTGCACATACAGCGAAATTGAACCAAATTTACGTGAAATATCTATTACCATTCGATACCATGAGTGAAAATAAtcggataaaattatttaatgacgTAGATAAGGTTTgggataataaatacaaaacaatggtTGAAGCTATGAATCCGAATCCCCAGAAAAGCCAAACACCTCCGTTAGACGAATCGGAAATCGGaccagaagaaaaaataatagaaaatgcaATGGTAGACATAGAAGATTGCATTCAAGGCGGCAGGCAAATGAATTTAGTTACGTTTAAAAAAGTTGCCAAAAAAGTTATGGATATAAACTTTTCTACCTCCGACCAACCATCAACATATGAAATCGAAAATAAGTACTGGGATTTGGTGACATCTTCAAATAATCACCTGTGCGTGAATTCTGCATCAATAGATACCGGAGGAGAAGGTTATGGTTTTACAAAGAACCTACGCAACTGCTATGGGAAGCACCCGTGGAACTTGAagATGCTGTaccagaacaaaagaaatatgttaCGCGCTTTGGGGCCATTAGTAGGCGTAACTGTTCCAACTTTACACCTTGGTATGTTATTTTCAACAAACTGCTGGCATCGGGACCCACATGGACTGCCATTGATCGATTATATGCACACCGGACCCAGCAAAATATGGTACGGTATCCCGGATGAAGAGAGTGCCAATTTTCGCCGTGCAGCGGAATTGCTATGTCCGACGCTATGCCAAAATAAGTCCATTTGGCTTCCGTCCGATACCGTAATGATACCACCCGACCGGCTGATAGATAAAGGAGTTTTGGTTTCTCGTGTCGTGCAAAAGCCCGGTCAATTCGTCGTGGTCTTCCCGCAGGCGTATAGGTGCTCCATATCAACGGGCTACACTGAGTCTGAAAGCGTCTACTTTGCAACTGACACGTGGCTGACAACCCTTCGCCATGTCTTTAATGAAATGCGTCTGAGTAGCGAACCGTCGATGTTCTCGCGGGAGAGACTGCTGATGGCGATAGCCTGCGATTCCCGCACTACCATTCCCGTCATGCGCACGGTACAACCACGCCTGCTAGATATCATCCTCGAAGAAATTTTACATCGCTGCGAAATTACGCAGTTCAATGTACCGaTCAAGAATAGCCGTCAGAACAAAAACTCCAGCAAGCGTCCCGGTGGGGCATGGACTGTTAGGGAGCAAGATGAGTGTGAGATTTGTCGGACGACGCTGATTTTTTCCAGGGCCCGAGGACTCTTACCCAAGAAGTGCTCAGTTTGCCTTCAGCACGCGCTGCATCTACTTAAATTGCACTGTCGCTCCGAGTTCTCCAGGGTCGAAGTAGAGTGCTTCTTTGACGAAGCGGAACTCAAAAGTATTAACGACAGGATGCAAAATAGATTACTAAAGTAA
- Protein Sequence
- MTLIVLLERLKETNPSLIQLRASQQNVTQPPPPPPPPSPPPPEPQPSTSGYVVKNIPKMKATQKKFSMCLRSNPGSSSSACTDRLRPKVTRICKQKVGINKKISGPDDDDKPLTYFAKAKEVNQRKSKPKEPVPVKVVTQRGNNAPLKQNLRSKGAGSGRAEVMPELVIPPVRPPPTTQSRGNSPNVFPEEAEESTVVRPLPAPVHSGTSPIVFAAVSGRAEVMPELVIPPVRPPPTMQSRGNSPNIFPEEAEESTVVRPLPSPVHCGTSPIVFPEEAEESTVVRPLPAPVHSGTSPIVFPGSGRAEVMPELVIPPDRPPPIMQSRGNSPIIFPAGSRRAEVMPELVIPPVRPPPIMQSRGNSPIIFPAPAEDKEYSPLNDYQVSPAPAEDKEYSPLNDYQVSPAPAEDKEYSPLNDYQVSPAESLSSGTRITDPTELRLYESKHQDERQSAEFDSSLAPSSSFEYEANQDVEYDVSDNEGDYRIPSPYLYLQEIDKPVKRKVTKKNLDKTFKSPNAPKRRKTVHTVTGGTAAQSSRTCTAKSFKIGSTSRQTNLNKRRSNQSASHLTAIKKTIKKKCSASEDNPPQRNSRRGQSSYTTQQNAKTNSNLMKDAPVFYPSEAEFSDPIAYITKITPDAAKFGMCKIVAPEGFKPNITLYDDVRFHVSNQYISRLFTRWGPASREMCAIEAHLASLNINFNRPPLLEGVEVDLPKFYRLVKELGGLTVINRYKKWSAVAEKMRLAHTAKLNQIYVKYLLPFDTMSENNRIKLFNDVDKVWDNKYKTMVEAMNPNPQKSQTPPLDESEIGPEEKIIENAMVDIEDCIQGGRQMNLVTFKKVAKKVMDINFSTSDQPSTYEIENKYWDLVTSSNNHLCVNSASIDTGGEGYGFTKNLRNCYGKHPWNLKMLYQNKRNMLRALGPLVGVTVPTLHLGMLFSTNCWHRDPHGLPLIDYMHTGPSKIWYGIPDEESANFRRAAELLCPTLCQNKSIWLPSDTVMIPPDRLIDKGVLVSRVVQKPGQFVVVFPQAYRCSISTGYTESESVYFATDTWLTTLRHVFNEMRLSSEPSMFSRERLLMAIACDSRTTIPVMRTVQPRLLDIILEEILHRCEITQFNVPIKNSRQNKNSSKRPGGAWTVREQDECEICRTTLIFSRARGLLPKKCSVCLQHALHLLKLHCRSEFSRVEVECFFDEAELKSINDRMQNRLLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -