Thag012759.1
Basic Information
- Insect
- Tanypteryx hageni
- Gene Symbol
- grn
- Assembly
- GCA_028673005.1
- Location
- CM054112.1:149477265-149478301[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-20 7.8e-16 60.1 4.7 1 35 18 51 18 52 0.98 2 2 1.6 4.9e+04 -3.3 0.1 3 9 186 192 185 193 0.78
Sequence Information
- Coding Sequence
- ATGACCCCGCAACCCTCTTGCTTCCATGATTGGCCGCCAGAGGGTCGAGAGTGCGTCAACTGTGGCGCCACATCGACGCCCCTGTGGCGCCGCGACGGCACGGGCCACTACCTCTGCAATGCCTGTGGTCTCTATTACAAGATGAACGGACAAAACAGGCCGCTCATCAAACCTAAGCGACGCCTGTCCAGTTTGTCGTCGGAAAAGAAGGAAAACATTCTCGGCCTCTTTATTGCTCGACAAACAAATCCAATCCATTTTATTCGAGACTCCTTGGGCGGTTACCACAGCATGCGAGAATTTCCgatagatatttcattaaaaacgtTTGCTACTCCTTCTTGTCGCCATTTGTACTTCGTGTCCCTTCTATTTATCCTCTTCCTCTTCACTCCTTCCCGCTGTATTCACACTCACTTTATGTTCTTTATTATTTTGTCCCATCTAAAACCCACCTCGCGCCCTCTTTTCCTTCTCGCAAAGGCAAActtctttccccttttcttctTGGAGGGTCACTCGCGTCAATCACCATTTGTTGCCCCTCGAAGGCAACAATGCCGGGGCAACAATACAGCGCCGTGA
- Protein Sequence
- MTPQPSCFHDWPPEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSSLSSEKKENILGLFIARQTNPIHFIRDSLGGYHSMREFPIDISLKTFATPSCRHLYFVSLLFILFLFTPSRCIHTHFMFFIILSHLKPTSRPLFLLAKANFFPLFFLEGHSRQSPFVAPRRQQCRGNNTAP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -