Basic Information

Insect: Tanypteryx hageni
Gene Symbol: Bcl11b
Assembly: GCA_028673005.1
Location: CM054113.1:159353836-159357785[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.022 15 8.9 0.4 1 23 24 47 24 47 0.95

2 6 6.3e-06 0.0045 20.0 1.5 2 23 474 495 474 495 0.98

3 6 0.0012 0.87 12.8 5.0 1 23 501 523 501 523 0.99

4 6 6.5e-07 0.00046 23.2 3.2 2 23 990 1011 989 1011 0.97

5 6 8.6e-06 0.006 19.6 3.3 1 23 1017 1039 1017 1039 0.99

6 6 5.5e-05 0.039 17.1 0.4 1 22 1047 1068 1047 1068 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.022	15	8.9	0.4	1	23	24	47	24	47	0.95
2	6	6.3e-06	0.0045	20.0	1.5	2	23	474	495	474	495	0.98
3	6	0.0012	0.87	12.8	5.0	1	23	501	523	501	523	0.99
4	6	6.5e-07	0.00046	23.2	3.2	2	23	990	1011	989	1011	0.97
5	6	8.6e-06	0.006	19.6	3.3	1	23	1017	1039	1017	1039	0.99
6	6	5.5e-05	0.039	17.1	0.4	1	22	1047	1068	1047	1068	0.97

Sequence Information

Coding Sequence: ATGTGGACGTGCCTCCTCGCCGACAGCCCTGACCGAAACACATTCCCGCGATACGTGAAACCGAGCAATTACCTATGCTCCACCTGCAAGAACCGATTCGGATCTGCGTGGACGCTTGTTCAGCACGTGCAAACAAGTCATGGGATCAAGATCTACGTGGAGTCATCTCCTTTATCCTCCTCTTCGACgtcttcctccgcctcctccctctcctccgctGGAGTCCCCACCGGGACATCAACCCCGCTCTCCGCGCCGGCGGCTCCGAGGCTATGCGACCTTTCCAGGACGCCTGCGGGAGCTTTGGGCGCCGGTGGCCTCGCCGCCCTCCAGCCGCCCATCCCCACATCTTCGGCGGCTCTCGCCGCCGCATTGGATCCGCACAACCCATTCGGATTGCTACGCATGCCACTCACCGACAGGCAGTTCAATCCGCACCCTCACCATCCCCATTCTCACCCACACGGccctccccctccaccacctcctccgcCGCACCATCACCATCACGGTCCGACGCATCACCACCACCcacaccaccatcaccaccagcCGTCTTCGGTGGCCCCTCCCCCACCATCTCACGTCGCAAATCCCTTCTCGAGGCCCGCCTCTAGTCACGACTTCCGGATGGAGCAGCTCGTCTCAGAGCAGTTCAGGCTAAATACGCACCACGCCCTCGGATTGGCGGCGGCCGCAGCAGCGGCTGCGGCTCAATTCGAGCCTCCCCCACCGCCCACGAGCGGTTCCTCCACCAGGCCTCCGCCTCCTCCACCCTTTCAGGCAGTTCCTTCCTCCACCGCCTCTTCCGTGGATCCGTTCGACAGAGCGGCAGCGGCGGTGGCGGCAGCTGCGGCGGCCGCAGCGGCTGCAGCCGGACCTACCCCCAAGCTTCCCTTGGGACTAAGCTCCGAGCCCACATTGGACTTCTACTCGCAGAGGCTCCGCCAACTGGCGGGTACTAATGGACCCGCCGTCCCACTGGGCACTACACACACCAGTCCCGGCTCCGGAGAACCCTCTTCGCCCTCCCCGCGGAAGGCTATGCTGACTCCTCCCTTCGCTACCAGTCCGGGAGGGTTGGTCCCACCGCCTCCTCCACCACCACCCACTCCCACGAGACAAACGCCTCCTCGGGCTTCGACGCCGAGACCTGGAAGCCGTCAGTCACCGACTACACCGAGCAAACCACGCGACGAGCAGACCTCCggtctccctctatcccttcagCTTCCCGTTCAACCGGCGAGACCTCGCTCTGCCTGTACGCCTCCGAAGGCTCCTCCAGAGGCGCTGCCTCCTCCAAGGCCAGCATCCGGGCGGTGCACCCCACCCATGGCTGTCGCATCCACTCCGGCAACTCCATTAACCCCATCAGGGCCGGGAGGAAAGGGAGGCAACTCTATGAGTCGCCTGAGAACCTGCGAGTTCTGCGGAAAGCGTTTCCGTTTCCTAAGTAACCTAGTCGTTCATAGGAGGTCCCACGCGGGAGAAAAGACCTACACGTGTTACATCTGCAAGCACACGTCAAATGTCCCTTCAAAATTCAAGAAACACATGAAGACCCACAGACGCGACGCCGCCAAGCCAAACACCTCCAATACCGAATCCGACGAGAAGGAATCGGGAGAGGATAACAAGAAGGAGAACTCCAGCGGAGATGGAGGCGAGTCTCCAGAAGAGAATAACAACGGAGGCGAGAGCGGTTCGGTCGCGGGGTCCGTGGAGAGCATTGACAACGAAGGAGAAGACGAGGTGGACGACGTTGAGGACGAGGACAATCTAGAGGAGGACATGGTGGAGGACGAAGAgttggaggaagaagaggaggagatggaacTGGAAGAAGACGAGGAACCTGAGCAGGAGGATGACGACGATGACGGCGAAGGGGAGGCTCCGGAGGATCTCACAACGAAATCGGCTTCCAGCGCCAACTCGACCCCTCCCGACCCCGTCTCTTCCTCTCGTCCCGTTCCATCCCCAAAGCCATCTTCTCCGCTCCCCACGAAGACCTCTGCGGCAGCCGCAGCAGCGGCGGCGGCAGCCATGGCATCCTCAGCAAGCTCCCTCGTAGGAGAGCTGATGGACAAATTCGGTCTTAGCAACATCGCCCAGTATAACGAGGCCTACAAACAAGCCCTACAGGAATCTGGGGGCAAGATAAGCCAGAAAGAGGAACGTCTCAGACTCACTCAACAACGCTTGAGTAGTCTCAACAATATCTGTGACAACAATAACATCGGTGGGAAGATGGTCggacctccccctcctctcccgccACCTCCGCCGTCGATATCCGCAGCCGCCGCGGCCGTGGCCGCCGTCGCAGCCGAGAATGGCGTCGACAAAGCGGCCTCCCTAAGATTCCGTGAAGAGTTCGCTAAAGGTCTTCTCGGTCATGCGGCGCCTCTCCACGACGCGTTGGGACCACACGGGATATTCGGCGCCGCCTTCGGTCCCGATAACCCGTTCGACGCCACCAGCAAAAGGCTGAAGCTGGACCTCGATAACCATCTTCACCACCATCATCACCATCACCTGACCGCAGCCCTCGGAGCAAGAGGAGCGGGTCATTCTGGAGAGCGGTTAGACGGGCTGTACGCCGGTTTGTGGCTTCCTGCGATGGCACACGCACCGAGAGACATCTTTGGAGGTGGAGCCGGCGGAGAGACCGCCCTGGGTCTCgatcatcaccaccatcacctTCTGTCAGCGACTAGGGCGGGAAAACCCTCCACCGATACGTCACACAAGAATGCAGGACTTCGGCTGGGCGACGCTCTGGTGAGCCCCAAGCCAGGGCCTAGCGCTTCGGCGGTGGCCGCGGCTGCTGCAGCGGCAGCAGCAGGCCTGAACCTAGGCGCCCTAGCCCCTAGCCCTGCGGCAGCGGCGGCCGCAGCCGCTGCAGCTGCCGCGGCTGCCTCCCAACAGAATCATATGAAGAAGGAGAACAGGAGGAACGACACTTGCGAGTTCTGCGGGAAGGTCTTCAAGAACTGCAGCAACCTCACGGTGCACAGGAGATCTCACACGGGGGAGAAGCCGTACAAGTGCGAGCTGTGCAGCTACGCATGCGCACAGTCTTCCAAGCTGACGCGGCACATGAAGACGCACGGGAGGTTGGGGAAAGACGTTTACAGGTGCCGCTTTTGCGAGATGCCATTCTCCGTCCCGTCGACGCTAGAGAAGCACATGAGGAAATGTGTGGTGAACCAAGGAGGCAAAGCTTTGGGAGGAGGTGCCGGGGGTCTCCTGCCCTCCTTGATCAGCGGCGAGGACACCGGAGACTCTTCGGCGTCCGCCTCAAAAGACACCACATGA
Protein Sequence: MWTCLLADSPDRNTFPRYVKPSNYLCSTCKNRFGSAWTLVQHVQTSHGIKIYVESSPLSSSSTSSSASSLSSAGVPTGTSTPLSAPAAPRLCDLSRTPAGALGAGGLAALQPPIPTSSAALAAALDPHNPFGLLRMPLTDRQFNPHPHHPHSHPHGPPPPPPPPPHHHHHGPTHHHHPHHHHHQPSSVAPPPPSHVANPFSRPASSHDFRMEQLVSEQFRLNTHHALGLAAAAAAAAAQFEPPPPPTSGSSTRPPPPPPFQAVPSSTASSVDPFDRAAAAVAAAAAAAAAAAGPTPKLPLGLSSEPTLDFYSQRLRQLAGTNGPAVPLGTTHTSPGSGEPSSPSPRKAMLTPPFATSPGGLVPPPPPPPPTPTRQTPPRASTPRPGSRQSPTTPSKPRDEQTSGLPLSLQLPVQPARPRSACTPPKAPPEALPPPRPASGRCTPPMAVASTPATPLTPSGPGGKGGNSMSRLRTCEFCGKRFRFLSNLVVHRRSHAGEKTYTCYICKHTSNVPSKFKKHMKTHRRDAAKPNTSNTESDEKESGEDNKKENSSGDGGESPEENNNGGESGSVAGSVESIDNEGEDEVDDVEDEDNLEEDMVEDEELEEEEEEMELEEDEEPEQEDDDDDGEGEAPEDLTTKSASSANSTPPDPVSSSRPVPSPKPSSPLPTKTSAAAAAAAAAAMASSASSLVGELMDKFGLSNIAQYNEAYKQALQESGGKISQKEERLRLTQQRLSSLNNICDNNNIGGKMVGPPPPLPPPPPSISAAAAAVAAVAAENGVDKAASLRFREEFAKGLLGHAAPLHDALGPHGIFGAAFGPDNPFDATSKRLKLDLDNHLHHHHHHHLTAALGARGAGHSGERLDGLYAGLWLPAMAHAPRDIFGGGAGGETALGLDHHHHHLLSATRAGKPSTDTSHKNAGLRLGDALVSPKPGPSASAVAAAAAAAAAGLNLGALAPSPAAAAAAAAAAAAAASQQNHMKKENRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQGGKALGGGAGGLLPSLISGEDTGDSSASASKDTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01385137;
90% Identity: iTF_01504986;
80% Identity: -