Basic Information

Insect: Tanypteryx hageni
Gene Symbol: -
Assembly: GCA_028673005.1
Location: CM054119.1:15430344-15432432[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 5.8e-06 0.004 20.2 6.4 1 23 43 65 43 65 0.98

2 8 0.0014 0.96 12.7 3.9 1 23 71 93 71 93 0.95

3 8 2.9e-05 0.021 18.0 0.9 1 23 99 121 99 121 0.97

4 8 9.9e-05 0.07 16.3 2.4 1 23 127 149 127 149 0.96

5 8 9.4e-05 0.066 16.4 0.7 2 23 156 177 155 177 0.97

6 8 1.8e-06 0.0013 21.7 2.5 2 23 184 205 183 205 0.96

7 8 0.0035 2.5 11.4 1.4 1 23 211 233 211 233 0.96

8 8 1.7e-06 0.0012 21.8 0.7 1 23 239 261 239 261 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	5.8e-06	0.004	20.2	6.4	1	23	43	65	43	65	0.98
2	8	0.0014	0.96	12.7	3.9	1	23	71	93	71	93	0.95
3	8	2.9e-05	0.021	18.0	0.9	1	23	99	121	99	121	0.97
4	8	9.9e-05	0.07	16.3	2.4	1	23	127	149	127	149	0.96
5	8	9.4e-05	0.066	16.4	0.7	2	23	156	177	155	177	0.97
6	8	1.8e-06	0.0013	21.7	2.5	2	23	184	205	183	205	0.96
7	8	0.0035	2.5	11.4	1.4	1	23	211	233	211	233	0.96
8	8	1.7e-06	0.0012	21.8	0.7	1	23	239	261	239	261	0.98

Sequence Information

Coding Sequence: ATGCCCGCAAACACTTTAAGAATCGTGCAAAGGAGGAAGATGGGGAGACTCCCAGAGCAGATACAGAACACGGAAAGGAAAGCggcggaagggaggaaggaggagtaTTATCAGGCCAGGATGGTTTACAAATGCCGCCATTGCGGGAAGGAATGCTCAAATAAATGGAATTTGAAGCGGCACTCGAAGATCCACAGAACGGAGAGGCCTTTCCTGTGTTGTATCTGTAGGAGGAGGTTTCGCCTGAAGGAGAACCTCTTACAGCACGAAAAGATGCACAAAAAGAAAAAGCTTTTTGATTGCAAGGAATGCGGGAAGAAGTTCCTTATGAGCAAGTACCTGATTAAGCACATGTTGGTCCACACCGGGAGAATGCAGTATAGGTGCGCTTACTGCAGCATGAGCTTCAAGAGGAGGTTTGAGCTGATTGAGCACCATTCCGCGCACGACGGGGAGAGAATATTAGAATGCGAGAAATGCAGGAAGGGATTTGAGAAGTGGAAGGATTTCGTGGCGCATCGCAAGTCCCATTTCGGGGAAAGGAAGTTGGTGTGCGACGTGTGCGGACGGACGTTTGCTTATAAATGCCATTTGAAGAGGCACGTGATGATTCACACGGGTGTAAAACCACACGAGTGCCGATtttgtggaaagcggttcttGAGGAGCTGGGGACTCGATATGCACATAAAACTTCACACTGGTGTAGGGTTGTTCTCTTGCGATGTGTGCGGGAAGAGTTTCCAGCAAAAGAATGACCTTGTCATTCACAATAAGACCCACACGAGGCTGCGGACATTCCCTTCTCACTCTAAGCGCTCTGCAGGAATTCTCGAAAGGGCCAATCCTGCCATTGGAGGGGGTCTTTTCGGCATGCGATATCTTAAGGAAATGGTGAAGGACACATTCGGGTAG
Protein Sequence: MPANTLRIVQRRKMGRLPEQIQNTERKAAEGRKEEYYQARMVYKCRHCGKECSNKWNLKRHSKIHRTERPFLCCICRRRFRLKENLLQHEKMHKKKKLFDCKECGKKFLMSKYLIKHMLVHTGRMQYRCAYCSMSFKRRFELIEHHSAHDGERILECEKCRKGFEKWKDFVAHRKSHFGERKLVCDVCGRTFAYKCHLKRHVMIHTGVKPHECRFCGKRFLRSWGLDMHIKLHTGVGLFSCDVCGKSFQQKNDLVIHNKTHTRLRTFPSHSKRSAGILERANPAIGGGLFGMRYLKEMVKDTFG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -