Basic Information

Insect: Tanypteryx hageni
Gene Symbol: -
Assembly: GCA_028673005.1
Location: CM054119.1:11931520-11933547[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 4.9e-05 0.034 17.3 1.8 1 23 88 110 88 110 0.98

2 12 0.058 41 7.6 0.1 2 21 180 199 179 200 0.91

3 12 0.001 0.72 13.1 0.4 2 23 286 307 285 307 0.97

4 12 0.02 14 9.0 5.2 1 23 337 359 337 359 0.99

5 12 4.7e-05 0.033 17.3 2.1 1 23 392 414 392 414 0.99

6 12 6.8e-07 0.00048 23.1 1.8 1 23 447 469 447 469 0.97

7 12 0.0002 0.14 15.3 0.7 2 23 493 514 492 514 0.97

8 12 0.0072 5 10.4 0.1 1 23 538 560 538 560 0.97

9 12 7.2e-05 0.05 16.7 1.7 1 23 566 588 566 588 0.98

10 12 0.00017 0.12 15.5 0.8 1 23 594 616 594 616 0.96

11 12 0.00065 0.45 13.7 3.8 1 23 622 644 622 644 0.99

12 12 0.014 9.9 9.5 0.1 1 23 650 672 650 672 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	4.9e-05	0.034	17.3	1.8	1	23	88	110	88	110	0.98
2	12	0.058	41	7.6	0.1	2	21	180	199	179	200	0.91
3	12	0.001	0.72	13.1	0.4	2	23	286	307	285	307	0.97
4	12	0.02	14	9.0	5.2	1	23	337	359	337	359	0.99
5	12	4.7e-05	0.033	17.3	2.1	1	23	392	414	392	414	0.99
6	12	6.8e-07	0.00048	23.1	1.8	1	23	447	469	447	469	0.97
7	12	0.0002	0.14	15.3	0.7	2	23	493	514	492	514	0.97
8	12	0.0072	5	10.4	0.1	1	23	538	560	538	560	0.97
9	12	7.2e-05	0.05	16.7	1.7	1	23	566	588	566	588	0.98
10	12	0.00017	0.12	15.5	0.8	1	23	594	616	594	616	0.96
11	12	0.00065	0.45	13.7	3.8	1	23	622	644	622	644	0.99
12	12	0.014	9.9	9.5	0.1	1	23	650	672	650	672	0.96

Sequence Information

Coding Sequence: ATGGTTTTTGATAAACCTCCATTCATTCCCCACTTCAGCAGCTCTTTTTCTTGCTTGTTTCAGGTATGCGACATTCCCGGTCAGCAGGAGGAAGCAGAATCTGCATTGCGGCCTAAACCAAAGAAAAGGAAGATTGACACTGTCGAAGCGACGGAGGATGTGAGACCAGATGCGAAAAGAAGTCGGCCTGAAGAAAACACGCTGAAATCGGACTTGAATGATAAACAAGGGGACGTCGAGAGGTGTAATGGTGAGAAAGGGTTTAAGTGCGAGACTTGCGGCAAGGTTTTCCAGAGCAGGATCAAGTTATTTATCCATAACAAGACGCATCCTGTCCAAAACCAAAGTCAGCCTTATAAAAACACGCCAACATTCGAAGCAAAGCAGGACGACGCTAAGATGTGTAGTGGTGAGAGACAGGTGAAATGCAGGAGCTGCGGGATCATAATGTCCAACAGCCGTGAAATGCGGGTCATCCGAAGGCAAAATCGGCCCGATAAAAACTTGAATGGGACGGGCAGCAACGAGTCGCAGTTAATGTGCAAAAGCTGTGATGAGCTTTTCCAGAGCAAGATCAATTTGTCCGCCCATGTTGAGACGTACGTCTTCCAAAAAAAAGGTCGGCCTGTTAGAAAGGCATCGAAACTCTACGTCAAGGAGAAGGCTGATATCGAAGAGTGTGACGTAGAGAGTGACGACGTCGAAGAGGAGGAGGACGCCGAAGAGGACAATCACGCCGAAGGGCGCAACAACCTCAAAGAGGGTGATGATGGCGAGGATAGCGACGATGATGGGGAGAACGAATACATTGAGAAGAACATCAATATCGAGAAAGATAGCAACCAGAAATGCATAGAATGTGACATCTGTGGGGAATTTTTCCTAAGCAAGCCCAAGTTAATCGCCCATCACAAAACGCATCTCGTCCAAAACACAAAACTGTTTGGTGAACAACCTCCGAAACGCTATGTCAAGAAGAAGCCGGACGCCGTGGAAACGTTTGCCAGTTTTAAATGTCAGATTTGCAGCGACACTTTCCAGAGCAAGATCAAATTGTTCAACCATCACAAGACGCACACCGTTCAAGAAAGAAGTCGACTTCCTAAAAAGGTACCGGTGCTCAACGTCAGCAAGGCGCAGGACGGCATCGAGAAGTGCAGCGGTGAGGATCAGTTTAAATGCGCGACCTGCAGCAAGGTTTTCCAGAGCAAGGTCGACTTACAGAGCCATTTCAAGACGCACACCATCCAAGAAAGAAGTCGGGTCAGTAAAAAGAAACCAGCGGCCGGTGACAACAAAGCGCGGGATGGCATCGAGAATTGCAACGGCGAGAAACAATTTAAATGCATCATATGCGGTAGGATCTTCAAGAACAAGTACAATTTACAGAGGCATTGGAAGACGCACAAAGCCTTGTTAAAAGCCAAATTTGATGAGAAACAGGACAAGGTCAAGGAGCGCGTGAATAAACACTTGCAGTGCAAGATTTGCAGCGAGGTTTTTGAAAACGCGATCAAATTCAGGACCCATCGTAGGTTGCACCGACTCAGGAATAGAATTAAGCCcggcgaaaagaaaaaaaagaagggaTCAATAACCAGAGAAAAGAACTACGTCTGCTCTGTTTGCGGGGTAAAGTTGATGGATAAACGGGGTCTGTTGCGGCATTTTAGTGTGCACACTGGCGAAAAACCGTTTCAATGCAAGGTGTGCCAGAAGCGGTTTGCTTTGGAACACGATCTCGCCAGGCACACCGCGAGACACAACGGGGAAGGATCTTTCAGTTGCAAGACCTGCGGGAAACGGTTCTGGCAGAATTACGATCTGGTGAGGCATTCGATCATCCACACCACGCAAATGCCGTATCGTTGCagaaaatgcaagaaaaaattcCGCGCCAGGATATATTACGAACGGCATGTGATGACGCACAAAGGAAGTGTGACGTTTGATTGCGGAGAATGTAGCAATAGTTACGCCAACATACTCGACCTTGAGAAGCATTTAAAGTGGCATTTCGGATCGTGA
Protein Sequence: MVFDKPPFIPHFSSSFSCLFQVCDIPGQQEEAESALRPKPKKRKIDTVEATEDVRPDAKRSRPEENTLKSDLNDKQGDVERCNGEKGFKCETCGKVFQSRIKLFIHNKTHPVQNQSQPYKNTPTFEAKQDDAKMCSGERQVKCRSCGIIMSNSREMRVIRRQNRPDKNLNGTGSNESQLMCKSCDELFQSKINLSAHVETYVFQKKGRPVRKASKLYVKEKADIEECDVESDDVEEEEDAEEDNHAEGRNNLKEGDDGEDSDDDGENEYIEKNINIEKDSNQKCIECDICGEFFLSKPKLIAHHKTHLVQNTKLFGEQPPKRYVKKKPDAVETFASFKCQICSDTFQSKIKLFNHHKTHTVQERSRLPKKVPVLNVSKAQDGIEKCSGEDQFKCATCSKVFQSKVDLQSHFKTHTIQERSRVSKKKPAAGDNKARDGIENCNGEKQFKCIICGRIFKNKYNLQRHWKTHKALLKAKFDEKQDKVKERVNKHLQCKICSEVFENAIKFRTHRRLHRLRNRIKPGEKKKKKGSITREKNYVCSVCGVKLMDKRGLLRHFSVHTGEKPFQCKVCQKRFALEHDLARHTARHNGEGSFSCKTCGKRFWQNYDLVRHSIIHTTQMPYRCRKCKKKFRARIYYERHVMTHKGSVTFDCGECSNSYANILDLEKHLKWHFGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -