Basic Information

Insect: Tanypteryx hageni
Gene Symbol: -
Assembly: GCA_028673005.1
Location: CM054119.1:15787543-15803357[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 9.6e-07 0.00068 22.6 7.0 1 23 44 66 44 66 0.99

2 12 0.0018 1.2 12.4 2.2 1 23 72 94 72 94 0.97

3 12 1.6e-05 0.011 18.8 1.4 1 23 100 122 100 122 0.98

4 12 0.00017 0.12 15.5 0.7 1 23 128 150 128 150 0.92

5 12 5.2e-05 0.037 17.2 0.4 2 23 157 178 156 178 0.97

6 12 4.4e-06 0.0031 20.6 6.4 1 23 346 368 346 368 0.98

7 12 0.00029 0.21 14.8 5.3 1 23 374 396 374 396 0.98

8 12 9.1e-06 0.0064 19.5 3.4 1 23 402 424 402 424 0.97

9 12 4e-05 0.028 17.5 3.3 1 23 430 452 430 452 0.98

10 12 5.9e-06 0.0041 20.1 0.6 2 23 459 480 458 480 0.97

11 12 1.5e-07 0.0001 25.2 0.4 2 23 487 508 486 508 0.96

12 12 3.8e-05 0.027 17.6 0.8 1 23 514 536 514 536 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	9.6e-07	0.00068	22.6	7.0	1	23	44	66	44	66	0.99
2	12	0.0018	1.2	12.4	2.2	1	23	72	94	72	94	0.97
3	12	1.6e-05	0.011	18.8	1.4	1	23	100	122	100	122	0.98
4	12	0.00017	0.12	15.5	0.7	1	23	128	150	128	150	0.92
5	12	5.2e-05	0.037	17.2	0.4	2	23	157	178	156	178	0.97
6	12	4.4e-06	0.0031	20.6	6.4	1	23	346	368	346	368	0.98
7	12	0.00029	0.21	14.8	5.3	1	23	374	396	374	396	0.98
8	12	9.1e-06	0.0064	19.5	3.4	1	23	402	424	402	424	0.97
9	12	4e-05	0.028	17.5	3.3	1	23	430	452	430	452	0.98
10	12	5.9e-06	0.0041	20.1	0.6	2	23	459	480	458	480	0.97
11	12	1.5e-07	0.0001	25.2	0.4	2	23	487	508	486	508	0.96
12	12	3.8e-05	0.027	17.6	0.8	1	23	514	536	514	536	0.95

Sequence Information

Coding Sequence: ATGCCAGCACCTAGATTAAGGAGAGTGCAAAAGAGAGACAAACGATCAAACGCTGGAGAGCAGGTGCAGCACATGAAAAGGGTggtagaggaggaggtggagaacgACAAGGACAATGGCCGCAAGTCGTACCAGTGCCACCATTGTGGGAAAGAATGCTCAAGGAAGTGGGATTTAAGTCGGCACATGAAGATCCATGGCACGGAGAAACCTTTCGCGTGTTCCACATGCGGGAAGAGATTCCTCGAGAAGCATTACCTCTTGGAGCACCAGAAGATACACGGAAAGAAGAtgtatttcaaatgcaaagagtgcggGAAGAGGTTCCTCGTGAGGAAATATTTGATTAAGCACATGTTGGTGCACACCGGTAGAAAGCAATTTAAGTGCGCTTACTGCGACGAAAGCTTCAAGAGGAAGCTTGAGCTGGACGACCACCAACCTACGCACGATGGTGAGAGATTGTGGGAATGCGAGGAATGCAGGAAGGGATTCGAGAAGTGGAAGGATTTGGTGAATCACCGCAAGTCCCATTTCGGAGAGAAAAAGTTGGTATTTGCAGCTGCCACCTTTAACTGCCCTGGGCAGAAGAAGGAAATGATGGCACTCCAATTTGTTCAGGTGATCCATGTGCCAGACAAGTGCTCCCTCTTCTTGAGTGATATTGTCAAGCTAGTACCCTTCCAAGCAAGCCTGGGGACCTCTAATTTCACTAAGGATCTCTATATCCCTGTAATCGCCCTAGGACTGAACGTCACACTCAAAGCCCGGCCTTCTCATGTTCCGGTTCCGCTGGTGGATCATGAACAGTGGAAATCCCAGTTGGGGGATCACCATATCCAACAGATGATCTCCGATGACAATGCCGTCgcttGTGATGCGACAGACCCGACCAGAGAAGAGAATCCGTTGTCTGAGGTGCCTTTGCCTAGATTAAGGAGCTTGCGGAAGAGGGAGACACGATCGAACATTGGAGAAGAGATACAGAAGATGGAAGCAGAGGAAGGGATAGTGACGGACCGGGGATGGAAGGTACACAAGTGCCTCCATTGTGAGAAAGAATTCACAAAGAATAGTTATTTAAAGAATCACATGAGGATCCACGGAACGGAGAAACTTTTCATGTGTTCTACATGCGGGAGGAGGTTCCTCCTGAAATACCATCTAACGCGGCACCAGAAGACTCACGAAATGAATAACGAACACGAATGTAAAGAATGTGGGAAGAAGCTCAGTAGGAGGGAGCACCTGATTAATCACAGGATGGTGCATACCGGTAAGAAGCCATACCAGTGCACTCACTGCAACAAGAACTTCAATAGTAAAGTCAAACTGGACGATCACCAATCCGTGCATGACGGGGAGACGGTGTGGGAATGTAAGGATTGCAAGAAGGAATTTGAGAGGTGGAAGGATTTAGTGGATCATCGCAAGTCTCATTTCGAGGAGAAGAAGTTGGTCTGCGACATATGCGGACGAAAGTTTACTTCTAAACAGCAATTGAGGAGACACATAATTATTCACATGGGTATAAAAGCACACGAATGCGACGTTTGCGGAAAGCGGTTCTCGAGACCCGATTATCTTCCTTTGCACACAAAACTTCACACTGGTGACGGGATGTTCTCTTGCGATAAGCAAACTTTCGTCCGCATATGTCGCAGACAAACTTCTTCTCCCCGAAATGAGACTTGCGATGATCCACTAAATCCTTCCACCTCTCAAATTCCTTCTTGCAATCCTTACATTCCCACACCATCTCCCCGTCATGCACGGATTGGTGATCGTCCATCATCCCCCAAGCTCACCGCTGTAGGCTAA
Protein Sequence: MPAPRLRRVQKRDKRSNAGEQVQHMKRVVEEEVENDKDNGRKSYQCHHCGKECSRKWDLSRHMKIHGTEKPFACSTCGKRFLEKHYLLEHQKIHGKKMYFKCKECGKRFLVRKYLIKHMLVHTGRKQFKCAYCDESFKRKLELDDHQPTHDGERLWECEECRKGFEKWKDLVNHRKSHFGEKKLVFAAATFNCPGQKKEMMALQFVQVIHVPDKCSLFLSDIVKLVPFQASLGTSNFTKDLYIPVIALGLNVTLKARPSHVPVPLVDHEQWKSQLGDHHIQQMISDDNAVACDATDPTREENPLSEVPLPRLRSLRKRETRSNIGEEIQKMEAEEGIVTDRGWKVHKCLHCEKEFTKNSYLKNHMRIHGTEKLFMCSTCGRRFLLKYHLTRHQKTHEMNNEHECKECGKKLSRREHLINHRMVHTGKKPYQCTHCNKNFNSKVKLDDHQSVHDGETVWECKDCKKEFERWKDLVDHRKSHFEEKKLVCDICGRKFTSKQQLRRHIIIHMGIKAHECDVCGKRFSRPDYLPLHTKLHTGDGMFSCDKQTFVRICRRQTSSPRNETCDDPLNPSTSQIPSCNPYIPTPSPRHARIGDRPSSPKLTAVG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -