Thag086030.1
Basic Information
- Insect
- Tanypteryx hageni
- Gene Symbol
- -
- Assembly
- GCA_028673005.1
- Location
- CM054116.1:116054045-116102156[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 43 0.069 49 7.3 4.7 1 23 10 32 10 32 0.94 2 43 0.018 13 9.2 4.2 1 23 38 60 38 60 0.93 3 43 0.00021 0.15 15.2 3.1 1 23 66 88 66 88 0.96 4 43 0.00037 0.26 14.5 1.0 2 23 95 116 94 116 0.97 5 43 7.6e-06 0.0053 19.8 5.0 1 23 189 211 189 211 0.96 6 43 0.069 49 7.3 4.7 1 23 217 239 217 239 0.94 7 43 0.018 13 9.2 4.2 1 23 245 267 245 267 0.93 8 43 0.00021 0.15 15.2 3.1 1 23 273 295 273 295 0.96 9 43 0.00037 0.26 14.5 1.0 2 23 302 323 301 323 0.97 10 43 2.9e-05 0.02 18.0 5.2 1 23 396 418 396 418 0.96 11 43 0.069 49 7.3 4.7 1 23 424 446 424 446 0.94 12 43 0.018 13 9.2 4.2 1 23 452 474 452 474 0.93 13 43 0.00021 0.15 15.2 3.1 1 23 480 502 480 502 0.96 14 43 0.00037 0.26 14.5 1.0 2 23 509 530 508 530 0.97 15 43 2.9e-05 0.02 18.0 5.2 1 23 603 625 603 625 0.96 16 43 0.069 49 7.3 4.7 1 23 631 653 631 653 0.94 17 43 0.018 13 9.2 4.2 1 23 659 681 659 681 0.93 18 43 0.00021 0.15 15.2 3.1 1 23 687 709 687 709 0.96 19 43 0.00037 0.26 14.5 1.0 2 23 716 737 715 737 0.97 20 43 2.9e-05 0.02 18.0 5.2 1 23 810 832 810 832 0.96 21 43 0.069 49 7.3 4.7 1 23 838 860 838 860 0.94 22 43 0.018 13 9.2 4.2 1 23 866 888 866 888 0.93 23 43 0.00021 0.15 15.2 3.1 1 23 894 916 894 916 0.96 24 43 0.00037 0.26 14.5 1.0 2 23 923 944 922 944 0.97 25 43 2.9e-05 0.02 18.0 5.2 1 23 1007 1029 1007 1029 0.96 26 43 0.069 49 7.3 4.7 1 23 1035 1057 1035 1057 0.94 27 43 0.018 13 9.2 4.2 1 23 1063 1085 1063 1085 0.93 28 43 0.00021 0.15 15.2 3.1 1 23 1091 1113 1091 1113 0.96 29 43 0.00037 0.26 14.5 1.0 2 23 1120 1141 1119 1141 0.97 30 43 7.6e-06 0.0053 19.8 5.0 1 23 1214 1236 1214 1236 0.96 31 43 0.069 49 7.3 4.7 1 23 1242 1264 1242 1264 0.94 32 43 0.018 13 9.2 4.2 1 23 1270 1292 1270 1292 0.93 33 43 0.00021 0.15 15.2 3.1 1 23 1298 1320 1298 1320 0.96 34 43 0.00037 0.26 14.5 1.0 2 23 1327 1348 1326 1348 0.97 35 43 0.018 13 9.2 4.2 1 23 1435 1457 1435 1457 0.93 36 43 0.00021 0.15 15.2 3.1 1 23 1463 1485 1463 1485 0.96 37 43 0.018 13 9.2 4.2 1 23 1561 1583 1561 1583 0.93 38 43 0.00021 0.15 15.2 3.1 1 23 1589 1611 1589 1611 0.96 39 43 2.9e-05 0.02 18.0 5.2 1 23 1673 1695 1673 1695 0.96 40 43 0.069 49 7.3 4.7 1 23 1701 1723 1701 1723 0.94 41 43 0.018 13 9.2 4.2 1 23 1729 1751 1729 1751 0.93 42 43 0.00021 0.15 15.2 3.1 1 23 1757 1779 1757 1779 0.96 43 43 0.00037 0.26 14.5 1.0 2 23 1786 1807 1785 1807 0.97
Sequence Information
- Coding Sequence
- ATGAAGACCCATGGGTCAGAGAAACCATTTTTATGTTCCACATGTGGGAAAAGGTTCCTCCTGAAGCACCACCTAGTGCAGCACCAGAAGGCACACGAAAAGAAGAAGGATTTTGAATGCAACAAGTGTGGGAAGAAGTTCCTTTTGAGGCACCACCTGTCACAGCATCTCGTGGTGCACAGTGGACGAAAGATGCATCAGTGCAAATACTGTGATGAGAGCTTTGACAGGAAACATGCCCTGGATGATCACCAATCTGCACATGATGGGGAGAGGGTGTGGGAATGCAAGCAGTGCAGGAAGGGATTTGATAAATGGAAGGATTTGGTGCAGCATCGCAAGTCTCATTTTGGAGAGAAGAAGTTGGCTTGCGATATATGTGGATCGAAGTGGGCTTGTGAAGTGACGGTCCAAACCAGAGCTGAGAATCCATCATCTGAGATACCTGGACCTAGCTCAAGGAGCAAGAAAAAGAAGATGATGAAAACACAATCAAACATTGAAGAGCAGCAGCTCAACATGGAAATGGAAGAAAAGAGGCAGAAGGATAAGGGCAAGAAGGTATACTTGTGTCACCAATGTGGCAAAGAATATTCACATTCTACAAATTTGAATCTACACATGAAGACCCATGGGTCAGAGAAACCATTTTTATGTTCCACTTGTGGGAAAAGGTTCCTCCTGAAACACCACCTAGTGCAGCACCAGAAGGCACACGAAAAGAAGAAGGATTTTGAATGCAACAAGTGTGGGAAGAAGTTCCTTTTGAGGCACCACCTGTCACAGCATCTCGTGGTGCACAGTGGACGAAAGATGCATCAGTGCAAATACTGTGATGAGAGCTTTGACAGGAAACATGCCCTGGATGATCACCAATCTGCACATGATGGGGAGAGGGTGTGGGAATGCAAGCAGTGCAGGAAGGGATTTGATAAATGGAAGGATTTGGTGCAGCATCGCAAGTCTCATTTTGGGGAGAAGAAGTTGGCTTGTGATATATGTGGATCGAAGTGGGCTTGTGAAGTGACAGTCCAAATCAGAGCTGAGAATCCATCATCTGAGATACCTGCACCTAGCTTAAGGAGCAAGCAAAAGAAGGTGATGAAAACACAATCAAGCATTGAAGAGCAGCAGCTCAACATGGAAATGGAAGAAAAGAGGCAGAAGGATAAGGGCAAGAAGGTATACTTGTGTCACCAATGTGGCAAAGAATATTCAAATTGTACAAGTTTGAATCTACACATGAGGACCCATGGGTCAGAGAAACCATTTTTATGTTCCACTTGTGGGAAAAGGTTCCTCCTGAAGCACCACCTAGTGCAGCACCAGAAGGCACACGAAAAGAAGAAGGATTTTGAATGCAACAAGTGTGGGAAGAAGTTCCTTTTGAGGCACCACCTGTCACAGCATCTCGTGGTGCACAGTGGACGAAAGATGCATCAGTGCAAATACTGTGATGAGAGCTTTGACAGGAAACATGCCCTGGATGATCACCAATCTGCACATGATGGGGAGAGGGTGTGGGAATGCAAGCAGTGCAGGAAGGGATTTGATAAATGGAAGGATTTGGTGCAGCATCGCAAGTCTCATTTTGGGGAGAAGAAGTTGGCTTGTGATATATGTGGATCGAAGTGGGCTTGTGAAGTGACAGTCCAAATCAGAGCTGAGAATCCATCATCTGAGATACCTGCACCTAGCTTAAGGAGCAAGCAAAAGAAGGTGATGAAAACACAATCAAGCATTGAAGAGCAGCAGCTCAACATGGAAATGGAAGAAAAGAGGCAGAAGGATAAGGGCAAGAAGGTATACTTGTGTCACCAATGTGGCAAAGAATATTCAAATTGTACAAGTTTGAATCTACACATGAGGACCCATGGGTCAGAGAAACCATTTTTATGTTCCACTTGTGGGAAAAGGTTCCTCCTGAAGCACCACCTAGTGCAGCACCAGAAGGCACACGAAAAGAAGAAGGATTTTGAATGCAACAAGTGTGGGAAGAAGTTCCTTTTGAGGCACCACCTGTCACAGCATCTCGTGGTGCACAGTGGACGAAAGATGCATCAGTGCAAATACTGTGATGAGAGCTTTGACAGGAAACATGCCCTGGATGATCACCAATCTGCACATGATGGGGAGAGGGTGTGGGAATGCAAGCAGTGCAGGAAGGGATTTGATAAATGGAAGGATTTGGTGCAGCATCGCAAGTCTCATTTTGGGGAGAAGAAGTTGGCTTGTGATATATGTGGATCGAAGTGGGCTTGTGAAGTGACAGTCCAAATCAGAGCTGAGAATCCATCATCTGAGATACCTGCACCTAGCTTAAGGAGCAAGCAAAAGAAGGTGATGAAAACACAATCAAGCATTGAAGAGCAGCAGCTCAACATGGAAATGGAAGAAAAGAGGCAGAAGGATAAGGGCAAGAAGGTATACTTGTGTCACCAATGTGGCAAAGAATATTCAAATTGTACAAGTTTGAATCTACACATGAGGACCCATGGGTCAGAGAAACCATTTTTATGTTCCACTTGTGGGAAAAGGTTCCTCCTGAAGCACCACCTAGTGCAGCACCAGAAGGCACACGAAAAGAAGAAGGATTTTGAATGCAACAAGTGTGGGAAGAAGTTCCTTTTGAGGCACCACCTGTCACAGCATCTCGTGGTGCACAGTGGACGAAAGATGCATCAGTGCAAATACTGTGATGAGAGCTTTGACAGGAAACATGCCCTGGATGATCACCAATCTGCACATGATGGGGAGAGGGTGTGGGAATGCAAGCAGTGCAGGAAGGGATTTGATAAATGGAAGGATTTGGTGCAGCATCGCAAGTCTCATTTTGGGGAGAAGAAGTTGGCTTGTGATATATGTGGATCGAAAGCTGAGAATCCATCATCTGAGATACCTGCACCTAGCTTAAGGAGCAAGCAAAAGAAGGTGATGAAAACACAATCAAGCATTGAAGAGCAGCAGCTCAACATGGAAATGGAAGAAAAGAGGCAGAAGGATAAGGGCAAGAAGGTATACTTGTGTCACCAATGTGGCAAAGAATATTCAAATTGTACAAGTTTGAATCTACACATGAGGACCCATGGGTCAGAGAAACCATTTTTATGTTCCACTTGTGGGAAAAGGTTCCTCCTGAAGCACCACCTAGTGCAGCACCAGAAGGCACACGAAAAGAAGAAGGATTTTGAATGCAACAAGTGTGGGAAGAAGTTCCTTTTGAGGCACCACCTGTCACAGCATCTCGTGGTGCACAGTGGACGAAAGATGCATCAGTGCAAATACTGTGATGAGAGCTTTGACAGGAAACATGCCCTGGATGATCACCAATCTGCACATGATGGGGAGAGGGTGTGGGAATGCAAGCAGTGCAGGAAGGGATTTGATAAATGGAAGGATTTGGTGCAGCATCGCAAGTCTCATTTTGGGGAGAAGAAGTTGGCTTGTGATATATGTGGATCGAAGTGGGCTTGTGAAGTGACGGTCCAAACCAGAGCTGAGAATCCATCATCTGAGATACCTGGACCTAGCTCAAGGAGCAAGAAAAAGAAGATGATGAAAACACAATCAAACATTGAAGAGCAGCAGCTCAACATGGAAATGGAAGAAAAGAGGCAGAAGGATAAGGGCAAGAAGGTATACTTGTGTCACCAATGTGGCAAAGAATATTCACATTCTACAAATTTGAATCTACACATGAAGACCCATGGGTCAGAGAAACCATTTTTATGTTCCACTTGTGGGAAAAGGTTCCTCCTGAAACACCACCTAGTGCAGCACCAGAAGGCACACGAAAAGAAGAAGGATTTTGAATGCAACAAGTGTGGGAAGAAGTTCCTTTTGAGGCACCACCTGTCACAGCATCTCGTGGTGCACAGTGGACGAAAGATGCATCAGTGCAAATACTGTGATGAGAGCTTTGACAGGAAACATGCCCTGGATGATCACCAATCTGCACATGATGGGGAGAGGGTGTGGGAATGCAAGCAGTGCAGGAAGGGATTTGATAAATGGAAGGATTTGGTGCAGCATCGCAAGTCTCATTTTGGGGAGAAGAAGTTGGCTTGTGATATATGTGGATCGAAGTGGGCTTGTGAAGTGACAGTCCAAATCAGAGCTGAGAATCCATCATCTGAGATACCTGCACCTAGCTTAAGGAGCAAGCAAAAGAAGGTGATGAAAACACAATCAAGCATTGAAGAGCAGCAGCTCAACATGGAAATGGAAGAAAAGAGGCAGAAGGATAAGGGCAAGAAGCACCACCTAGTGCAGCACCAGAAGGCACACGAAAAGAAGAAGGATTTTGAATGCAACAAGTGTGGGAAGAAGTTCCTTTTGAGGCACCACCTGTCACAGCATCTCGTGGTGCACAGTGGACGAAAGATGCATCAGTGCAAATACTGTGATGAGAGCTTTGACAGGAAACATGCCCTGGATGATCACCAATCTGCACATGATGGGGAGAGGGCTTGTGAAGTGACAGTCCAAATCAGAGCTGAGAATCCATCATCTGAGATACCTGCACCTAGCTTAAGGAGCAAGCAAAAGAAGGTGATGAAAACACAATCAAGCATTGAAGAGCAGCAGCTCAACATGGAAATGGAAGAAAAGAGGCAGAAGGATAAGGGCAAGAAGCACCACCTAGTGCAGCACCAGAAGGCACACGAAAAGAAGAAGGATTTTGAATGCAACAAGTGTGGGAAGAAGTTCCTTTTGAGGCACCACCTGTCACAGCATCTCGTGGTGCACAGTGGACGAAAGATGCATCAGTGCAAATACTGTGATGAGAGCTTTGACAGGAAACATGCCCTGGATGATCACCAATCTGCACATGATGGGGAGAGGGCTTGTGAAGTGACAGTCCAAATCAGAGCTGAGAATCCATCATCTGAGATACCTGCACCTAGCTTAAGGAGCAAGCAAAAGAAGGTGATGAAAACACAATCAAGCATTGAAGAGCAGCAGCTCAACATGGAAATGGAAGAAAAGAGGCAGAAGGATAAGGGCAAGAAGGTATACTTGTGTCACCAATGTGGCAAAGAATATTCAAATTGTACAAGTTTGAATCTACACATGAGGACCCATGGGTCAGAGAAACCATTTTTATGTTCCACTTGTGGGAAAAGGTTCCTCCTGAAGCACCACCTAGTGCAGCACCAGAAGGCACACGAAAAGAAGAAGGATTTTGAATGCAACAAGTGTGGGAAGAAGTTCCTTTTGAGGCACCACCTGTCACAGCATCTCGTGGTGCACAGTGGACGAAAGATGCATCAGTGCAAATACTGTGATGAGAGCTTTGACAGGAAACATGCCCTGGATGATCACCAATCTGCACATGATGGGGAGAGGGTGTGGGAATGCAAGCAGTGCAGGAAGGGATTTGATAAATGGAAGGATTTGGTGCAGCATCGCAAGTCTCATTTTGGGGAGAAGAAGTTGGCTTGTGATATATGTGGATCGAAGTGGGCTTGTGAAGTGACAGTCCAAATCAGAGCTGAGAATCCATCATCTGAGATACCTGCACCTAGCTTAAGGAGCAAGCAAAAGAAGGTGATGAAAACACAATCAAGCATTGAAGAGCAGCAGCTCAACATGGAAATGGAAGAAAAGAGGCAGAAGGATAAGGGCAAGAAGGTTCCTCCTGAAGCACCACCTAGTGCAGCACCAGAAGGCACACGAAAAGAAGAAGGATTTTGA
- Protein Sequence
- MKTHGSEKPFLCSTCGKRFLLKHHLVQHQKAHEKKKDFECNKCGKKFLLRHHLSQHLVVHSGRKMHQCKYCDESFDRKHALDDHQSAHDGERVWECKQCRKGFDKWKDLVQHRKSHFGEKKLACDICGSKWACEVTVQTRAENPSSEIPGPSSRSKKKKMMKTQSNIEEQQLNMEMEEKRQKDKGKKVYLCHQCGKEYSHSTNLNLHMKTHGSEKPFLCSTCGKRFLLKHHLVQHQKAHEKKKDFECNKCGKKFLLRHHLSQHLVVHSGRKMHQCKYCDESFDRKHALDDHQSAHDGERVWECKQCRKGFDKWKDLVQHRKSHFGEKKLACDICGSKWACEVTVQIRAENPSSEIPAPSLRSKQKKVMKTQSSIEEQQLNMEMEEKRQKDKGKKVYLCHQCGKEYSNCTSLNLHMRTHGSEKPFLCSTCGKRFLLKHHLVQHQKAHEKKKDFECNKCGKKFLLRHHLSQHLVVHSGRKMHQCKYCDESFDRKHALDDHQSAHDGERVWECKQCRKGFDKWKDLVQHRKSHFGEKKLACDICGSKWACEVTVQIRAENPSSEIPAPSLRSKQKKVMKTQSSIEEQQLNMEMEEKRQKDKGKKVYLCHQCGKEYSNCTSLNLHMRTHGSEKPFLCSTCGKRFLLKHHLVQHQKAHEKKKDFECNKCGKKFLLRHHLSQHLVVHSGRKMHQCKYCDESFDRKHALDDHQSAHDGERVWECKQCRKGFDKWKDLVQHRKSHFGEKKLACDICGSKWACEVTVQIRAENPSSEIPAPSLRSKQKKVMKTQSSIEEQQLNMEMEEKRQKDKGKKVYLCHQCGKEYSNCTSLNLHMRTHGSEKPFLCSTCGKRFLLKHHLVQHQKAHEKKKDFECNKCGKKFLLRHHLSQHLVVHSGRKMHQCKYCDESFDRKHALDDHQSAHDGERVWECKQCRKGFDKWKDLVQHRKSHFGEKKLACDICGSKAENPSSEIPAPSLRSKQKKVMKTQSSIEEQQLNMEMEEKRQKDKGKKVYLCHQCGKEYSNCTSLNLHMRTHGSEKPFLCSTCGKRFLLKHHLVQHQKAHEKKKDFECNKCGKKFLLRHHLSQHLVVHSGRKMHQCKYCDESFDRKHALDDHQSAHDGERVWECKQCRKGFDKWKDLVQHRKSHFGEKKLACDICGSKWACEVTVQTRAENPSSEIPGPSSRSKKKKMMKTQSNIEEQQLNMEMEEKRQKDKGKKVYLCHQCGKEYSHSTNLNLHMKTHGSEKPFLCSTCGKRFLLKHHLVQHQKAHEKKKDFECNKCGKKFLLRHHLSQHLVVHSGRKMHQCKYCDESFDRKHALDDHQSAHDGERVWECKQCRKGFDKWKDLVQHRKSHFGEKKLACDICGSKWACEVTVQIRAENPSSEIPAPSLRSKQKKVMKTQSSIEEQQLNMEMEEKRQKDKGKKHHLVQHQKAHEKKKDFECNKCGKKFLLRHHLSQHLVVHSGRKMHQCKYCDESFDRKHALDDHQSAHDGERACEVTVQIRAENPSSEIPAPSLRSKQKKVMKTQSSIEEQQLNMEMEEKRQKDKGKKHHLVQHQKAHEKKKDFECNKCGKKFLLRHHLSQHLVVHSGRKMHQCKYCDESFDRKHALDDHQSAHDGERACEVTVQIRAENPSSEIPAPSLRSKQKKVMKTQSSIEEQQLNMEMEEKRQKDKGKKVYLCHQCGKEYSNCTSLNLHMRTHGSEKPFLCSTCGKRFLLKHHLVQHQKAHEKKKDFECNKCGKKFLLRHHLSQHLVVHSGRKMHQCKYCDESFDRKHALDDHQSAHDGERVWECKQCRKGFDKWKDLVQHRKSHFGEKKLACDICGSKWACEVTVQIRAENPSSEIPAPSLRSKQKKVMKTQSSIEEQQLNMEMEEKRQKDKGKKVPPEAPPSAAPEGTRKEEGF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -