Thag113479.1
Basic Information
- Insect
- Tanypteryx hageni
- Gene Symbol
- lov
- Assembly
- GCA_028673005.1
- Location
- CM054120.1:113274485-113275198[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-11 4.4e-07 32.2 0.2 17 44 1 28 1 29 0.95
Sequence Information
- Coding Sequence
- ATGACGACTGCTCAGGCCTCTCGTATTTATGGAATCCCTTACGGTAGTCTCTACATGTACGTAAAAGGTAAATACGGTAAGTCGCTCAAATTAGAGCAGTTAAAAAAGAACTGTTTGGTGGGCGGGGGACGTGGAGGACCCCTTCAAGGGACCGAGCTGCTCCCTCCAGTGTTACCTCTGGGCCGCGGACCGTACCCGGGGCGCgcagagggggaggaggtgggtggAAGCAGCAGAGACGTGGAGTCTGCCTTACCTCTAGACCCTTATGCACACCTCTACTCAGACTTCGGATCATTCCCCATACCCGTGGGAATGATACATTTGCTGCCGCAGTCGGAGAAGAACAGGGAGTTCTCAGTGGAGCTCGGAGTGCCGGAGAAGAGGGAAAAGAAGAAGGCTGgcaagagggagaagagggaaaggagggaggagaaggagaggaaggaggagagggagaggaaggagggatgcgagaggggagagaagcaggcgagggtgagagaggaggtgagCAAGGAGAAGGTGGCAGAGGAGGtggatggaagaggagagaaggctTTCAAGGAGGCAGAGGAAGTGGTTCTGAAAATAGAAGAGGATTACCAGTATAGGGAGGGTGTTAGAGGTGCGAACCTCTGTGATGGGGATCCCCTTGCCGAAGTTGTGGGGCACGATAACGAGAGGCGAGGCGATCCCATGGTTTGTGATTAA
- Protein Sequence
- MTTAQASRIYGIPYGSLYMYVKGKYGKSLKLEQLKKNCLVGGGRGGPLQGTELLPPVLPLGRGPYPGRAEGEEVGGSSRDVESALPLDPYAHLYSDFGSFPIPVGMIHLLPQSEKNREFSVELGVPEKREKKKAGKREKRERREEKERKEERERKEGCERGEKQARVREEVSKEKVAEEVDGRGEKAFKEAEEVVLKIEEDYQYREGVRGANLCDGDPLAEVVGHDNERRGDPMVCD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01504617;
- 90% Identity
- -
- 80% Identity
- -