Thag056422.1
Basic Information
- Insect
- Tanypteryx hageni
- Gene Symbol
- bab1
- Assembly
- GCA_028673005.1
- Location
- CM054114.1:163135704-163140470[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-14 1.7e-10 43.1 0.1 4 45 445 486 442 486 0.92
Sequence Information
- Coding Sequence
- ATGGGGACTTCTGCGCAGCAATATTGCCTCAGATGGAACAACCACCGCTCTAACTTGCTCACCGTGTTTGACCAGCTGTTGCAAAATGAGGCCTTCACGGATGTCACCCTGGCATGCGAAGGTGCCTCCATCAAGTGCCATAGGATGGTGTTGGCAGCCTGTTCCTCATACTTCCGATCTCTCTTCACGGACCTCTCTTGCAGGCATTTGGTGGTTGTACTGAAAGATGTCGGCTACCCGGAGATCAAGGCCATCCTCGAGTACATGTACAGGGGTGAGGTGAACGTTGCCCAGGATCAGCTGGCAGCGCTTCTCCGAGTGGCCGAGACCCTTAAGGTCAAAGGTCTTGTAGAGGAGAATGTGCGTGCAGATTCTCCTCAGtctcacctctcccctccctccacggCTGTCTCCACATCCGTGTCCTCCGTacctcccaacctctctcctcCCAGGGCTGCTGGAATGACGACCGTGTCCCACTCCCATTCCTATGCTCCCTCTCCGCCATCTCCTCCCGTGATGCCCACGGGCATGCCTGGCAGCAGTGTGGATCGCACTCCTCGTCCAGTAGGTCTTCCTGCTTGGGCGATGCCACCCGGTGCTCACAGGTCTCACCACCAGTACCACCCGCACCACGTGCAGGCCCACTCACATCACCACCCTCTCATCCAGCATGggacccctcctcctccctcctcccaccaccCCTGTGCCCCGCCTACCTCCATGCACCATCTGCAGGAGAACTCTTCTAGGGATGCGCCCGAAGTAGGGGACCTTTCGACTTCCCCCAAGCGCAGGAGGCCCTCTGGGGACAGCCCCTCTATCCATCGCTTTCCCTCACCCCCGCTGCCCCAGAGGCGTGACACACCCATCCTACGTACCGTGCTTGGACAGAGCCATGTCCATCACCCGCTGGGGTCACCGCTCTCCCGGCCGGTGGCGCTCCTATCTTCCTCTCGCTCCAACCGTGAGCATGGGGATGGTGGAAATGATGGTGCTGATTCTTCCCAGTCAGCGCAGAGGCCTGTCTCACTGGTGTGTCGCCATGGTTCGGGTGCTTCCCCCGATCGTGAAAGCTCAAATGGATCTGCAAGGGAATCTGAGAGGATAATTAAATATGAACAATCATATGATGATGAACATCTGTCTTACACCAGCATCTCAAACACTGATGATGAATCTGCTGATAAGaaaaatgttCTCATGCTGCCAGGGTCTACTCAGCCAACCTTTTCTGGAGAAATGAAAGGAATTTCATCTGGAATTGCCACTTATGTGCCAACGCAGAAACCCGAGTGGAAGCGATACAAGCAGTACACTCGGAGCGACATAATGTCTGCCATTGAGGCAGTCAGAACTGGCATGAGTGCTCTTCAGGCAGCCCGCAAGTATGGTGTACCATCACGTACCCTGTACGACAAGGTTAAGAAGCTCGGGATTACGACAAGTAGGCCCTTCAAAAGGGCAGGTGCACCGATGGCTCACCACACAGGTGGAAATGGGAGTGAGTCTCCCGGGAAGCCCACTCCCCCACCTATGCCACCGACCCAGCAGGGTCAGCCCCCTCCTACCCCCACAACACCGAACTCTTCCCCAAATGAGGGCGATCCTGAGACCCCTCCAGGGGGTCAAGAGGGGTCGGGTGAAGGTAGCAGTGTGGACGGCAGGATGGAAGAGAGCCAATCGCCTCAACTCCACCGCATGTCCAGCCATCCTCACCTCCACTTTGCGCATGCACCTTCTGCTCAGCATCGCTCGCCTCCATGCTCGAACCCCACGCCTACACCTCCCTCGGAGGTTAATGAGGCACCTGAACCACGAGGTTCCGTCCTGACGGCCGTGCCAAGGCACGTCGAGGAAGGGGAAACGAACGACGACATCGGGCGGCCAGCCTCTCGAGAAGGACAGTTGTGCATTGCTAGCCCGGGGTCCAATGTGGGAGGCTTCTGCGGAGAGAGCCGAGGAttgaaggaggaggagaatgaggaggCTGAAGACGAGGTGGAGGATCTTTCGGTTggtgggagacagagggaggttGGTTCGGTGGTAGCTTTTGTGCCAGGGGATAGCAGTCGTAGGGAAGGGGTGGTTGTCATGGcagagaggatggaggaagggagagtcgGAGGCCCTGTTGGCAAAGGTGAAGAGGTGATGGACTGA
- Protein Sequence
- MGTSAQQYCLRWNNHRSNLLTVFDQLLQNEAFTDVTLACEGASIKCHRMVLAACSSYFRSLFTDLSCRHLVVVLKDVGYPEIKAILEYMYRGEVNVAQDQLAALLRVAETLKVKGLVEENVRADSPQSHLSPPSTAVSTSVSSVPPNLSPPRAAGMTTVSHSHSYAPSPPSPPVMPTGMPGSSVDRTPRPVGLPAWAMPPGAHRSHHQYHPHHVQAHSHHHPLIQHGTPPPPSSHHPCAPPTSMHHLQENSSRDAPEVGDLSTSPKRRRPSGDSPSIHRFPSPPLPQRRDTPILRTVLGQSHVHHPLGSPLSRPVALLSSSRSNREHGDGGNDGADSSQSAQRPVSLVCRHGSGASPDRESSNGSARESERIIKYEQSYDDEHLSYTSISNTDDESADKKNVLMLPGSTQPTFSGEMKGISSGIATYVPTQKPEWKRYKQYTRSDIMSAIEAVRTGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRAGAPMAHHTGGNGSESPGKPTPPPMPPTQQGQPPPTPTTPNSSPNEGDPETPPGGQEGSGEGSSVDGRMEESQSPQLHRMSSHPHLHFAHAPSAQHRSPPCSNPTPTPPSEVNEAPEPRGSVLTAVPRHVEEGETNDDIGRPASREGQLCIASPGSNVGGFCGESRGLKEEENEEAEDEVEDLSVGGRQREVGSVVAFVPGDSSRREGVVVMAERMEEGRVGGPVGKGEEVMD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01504599;
- 90% Identity
- iTF_01402200;
- 80% Identity
- iTF_01402200;