Thag113189.2
Basic Information
- Insect
- Tanypteryx hageni
- Gene Symbol
- lov
- Assembly
- GCA_028673005.1
- Location
- CM054120.1:109051547-109070943[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.7e-17 6.9e-13 50.8 0.0 2 44 159 201 158 202 0.94
Sequence Information
- Coding Sequence
- ATGAGTTGGGGGCCCCGCAACCCATCTGGTGCCCTGGGCCCCGCGGACAAACCGACGAAATGTGAAGTAGAAGAGATTCAGCCTCAGAAGCAGAAGAGCGCTCAAACAGAGCCAACGCAATTCCCAACGCCTCAGCCGCCGCTAATCGACAGTTCGGCTGTCGACAACCAACCTCTTAGCATGGCCCCTGACAGAGGGGATTACACCAATTGCACGGATTCCATCAGCCTACCACCACTTCCATCAGATTCGTCTTTGGATAGCACACCATTCCCTCAGCTACCGTCCGTGTCTGCGCTGTCTCTGACGCCTCCACAAGGTTTCTTTTCCCCATTAGACGTATGCCAGAATCCTCTTCTAAATGAAATCCTTCCAGAGACGCGGATTGAGAATCACATTCTAGGAAAAAGAAAATTGGGGAGACCCAAGGGGCAGCACAGCGCCCCGCGAGGTGGCCCGCCGCGCTCTTGGACGAATTCGGAACTCACGGAGGCGCTGCACAATGTTTGGAACAAAAGAATGACGACTTCTCAGGCCTCTCGTATTTTTGGAATCCCTTACAATAGTCTCCTCATGTACGTACGAGGTAAATACGGTAAGTCGCTCAAATTAGAGCAGTTAAAAAAGAACTGTTTGGTGGGCGGGGGACGTGGAGGACCCCTTCAAGGGACCGAGCTGCTCCCTCCAGTGTTACCTCTGGGCCGCGGACCGTACCCGGGGCtcgcggagggggaggaggtgggtggAAGCAGCAGAGACGTGGAGTCTGCCTTACCTCTAGACCCTTATGCACACCTCTACTCAGATTTCGGATCATTCCCCATACCCGTGGGAATGATACATTTGCTGCCGCAGTCGGAGAAGAACAGGGAGTTCCCAGTGGAGCTGGGAGTGCCGGAGAAGAGGGAAAAGAAGAAGGCtggcaagagggagaggagggaaaggagggaggagaaggagaggaaggaggagagggagaagaaggagggatgcgagaggggagagaagcaggcgagggtgggagaggaggtgaGCAAGGAGAAGGTGGCAGAGGAGGtggatggaagaggagagaaggctTTCAAGGAGGCAGAGGAAGTGGTTCTGAAAATGAAAGAGGATTACCAGAATAGGGAGGGTGTTAGAGGTGCGAACCTCTGTGATGGGGATCCCCTTGCCGAAGTTGTGGGGCACGATAACGAGAGGCGAGGCGATCCCATGGTTTGTGATTAA
- Protein Sequence
- MSWGPRNPSGALGPADKPTKCEVEEIQPQKQKSAQTEPTQFPTPQPPLIDSSAVDNQPLSMAPDRGDYTNCTDSISLPPLPSDSSLDSTPFPQLPSVSALSLTPPQGFFSPLDVCQNPLLNEILPETRIENHILGKRKLGRPKGQHSAPRGGPPRSWTNSELTEALHNVWNKRMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLKKNCLVGGGRGGPLQGTELLPPVLPLGRGPYPGLAEGEEVGGSSRDVESALPLDPYAHLYSDFGSFPIPVGMIHLLPQSEKNREFPVELGVPEKREKKKAGKRERRERREEKERKEEREKKEGCERGEKQARVGEEVSKEKVAEEVDGRGEKAFKEAEEVVLKMKEDYQNREGVRGANLCDGDPLAEVVGHDNERRGDPMVCD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -