Thag078932.1
Basic Information
- Insect
- Tanypteryx hageni
- Gene Symbol
- retn
- Assembly
- GCA_028673005.1
- Location
- CM054116.1:43521985-43531103[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-13 1e-08 38.2 0.0 30 82 297 347 291 350 0.92
Sequence Information
- Coding Sequence
- ATGGGCAAGAAAccgcattttctctctctttctcctatctctctctctctcgaaaataTTGGCTTCGGTCTTTCCCTGGTGGTTCTTTCGGGAACCGCAACGAAGGACGACTCCCGAACTGACGTTACCGACCCCTGGTCTAAACAATTTCCCCAGAAGAGGAGACGCGTCAATCGTCCTCGGCGCATAATAAAATCGCGGACTCGGCGGCGGCGGAGGAGGCGTTTCGATGCGCCCGAAACGTGCCTCGGAGCgatttccatttctctctttcttctcccctctcgcGCACATATGCACGCAAACACGCTTGTGCATCTCGCCAAAACCATTTGCTACCGCGCGAGGACGGTCACGCCCTCCTTGCGCCTCATGCTTCGCTGTTTCCTCcccgcctctcttcctctctggaACACCCTCCTCTCTCAACCCAGCCTTCTCGCGTTAAAGCCCCTTCATTTCTGCGATAGCGAGGGGTTGCCTTTGAGGGAGgttagggagggagaaatgagagtGAAAGACCTCCCGcgccatcctcctcctcctcttcttgacGTAAGCGACCAAGAAGAGTTTTCCGAGTCACGGCACGACCTCTCTCTGCCATTCCCAAATCGCGAGATTGCTTTAGACGTCGTTCCAACTACTACTAGGTTGCGAAGTTCCCCCCTCCTACCGGTCATCACGCCTCCTGCAGTAATCTTATGCTTTTACAACCTTCTACCCAATCGTTTTCTCCTTCGGAGTTCAGTTAACCCCATTACCACCGATGCGTTCTTATCGGCTCCCATTCTTACACCTTTGCTATATCACTCCCGGGTTCCTCATTGTCGGCTCGAGAAGAAAGAGGTGGAACTcggagacgggggagggaggggggagacagagGTGCTGGACCTGTACGAACTATACAACCTCGTGATCGCACGGGGCGGTCTAGTCGACGTGATCAACAAGAAGTTGTGGCAGGAGATCATCAAAGGACTGCACCTGCCTTCGTCAATCACTTCAGCCGCATTCACGCTTCGTACTCATTATATAGTTATATCGAGAGAGATGGCTCCACCCAtgcatctctctcactctcccacgCGCCCCTCGCACTTGCTAAGGACGAATCCCCGTCTTGTCCGTAGCGAGATCATTGCGTGGGAGGGGTGTGGCGGCGGTGGCGGCTGCTGGGGTGTCGGTGAGGAAAAGCGGGCGGTGCGGCCGACGCTTCATCCGCAGTCGCCTCCATTCCCTCCTCGCCCTCTTCGCCGAAGGGCGAGGCCCCGAATTTGGGCACGCGTGAATTTTATGTTTTCCTCTCGTCATCGCTTTTCCTCTCGCTCGAATTCATTGACCTTCCTTCATAACCTTCCACTCACGATGCTCGGTTGGCCGCCTCCGGCGCGGTCATCTCATCTCTGCACCGTAAGCCTCGCCGGTTCGTATCCCGGGCCGTTATGGCTAGACTATCGTTTTCGGCAACTTGTTACCTACAAAAGAGAAACGGCGGAAAAAACTACACCCGAAGGGTCCGATGAACTCGAACTCGCGTCCTCGAGGTCTGCGCGAGGCGGAAATTTCCCTAACCCTCTCTGCCGGCGAAAAAATGAACCATTAATCATCGGTTTGATCATCATCCGATCTCTGCCTCGTTCGGATAACTAA
- Protein Sequence
- MGKKPHFLSLSPISLSLENIGFGLSLVVLSGTATKDDSRTDVTDPWSKQFPQKRRRVNRPRRIIKSRTRRRRRRRFDAPETCLGAISISLFLLPSRAHMHANTLVHLAKTICYRARTVTPSLRLMLRCFLPASLPLWNTLLSQPSLLALKPLHFCDSEGLPLREVREGEMRVKDLPRHPPPPLLDVSDQEEFSESRHDLSLPFPNREIALDVVPTTTRLRSSPLLPVITPPAVILCFYNLLPNRFLLRSSVNPITTDAFLSAPILTPLLYHSRVPHCRLEKKEVELGDGGGRGETEVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTHYIVISREMAPPMHLSHSPTRPSHLLRTNPRLVRSEIIAWEGCGGGGGCWGVGEEKRAVRPTLHPQSPPFPPRPLRRRARPRIWARVNFMFSSRHRFSSRSNSLTFLHNLPLTMLGWPPPARSSHLCTVSLAGSYPGPLWLDYRFRQLVTYKRETAEKTTPEGSDELELASSRSARGGNFPNPLCRRKNEPLIIGLIIIRSLPRSDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -