Tacr019598.1
Basic Information
- Insect
- Tachystola acroxantha
- Gene Symbol
- nfxl1
- Assembly
- GCA_963506565.1
- Location
- OY735892.1:824509-826983[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1 2.6e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.032 8.5e+02 0.7 0.4 4 10 169 175 168 175 0.96 3 19 1.2e-07 0.0032 18.0 14.1 3 19 186 202 185 202 0.95 4 19 2e-06 0.052 14.1 11.9 3 19 239 255 237 255 0.92 5 19 0.54 1.4e+04 -3.3 1.4 5 10 279 284 279 284 0.89 6 19 3.6e-09 9.6e-05 22.9 11.5 1 19 290 308 290 308 0.98 7 19 7.4e-07 0.02 15.5 19.2 3 19 345 361 337 361 0.86 8 19 0.55 1.4e+04 -3.3 0.5 7 11 365 369 365 369 0.87 9 19 0.95 2.5e+04 -4.0 0.9 5 10 384 389 384 389 0.89 10 19 1.5e-06 0.039 14.5 18.2 1 18 395 412 395 413 0.97 11 19 3.5e-09 9.4e-05 22.9 13.1 1 19 422 440 422 440 0.98 12 19 0.0001 2.7 8.6 6.4 9 19 488 498 486 498 0.89 13 19 0.0028 73 4.1 6.3 4 12 510 518 508 518 0.90 14 19 0.16 4.1e+03 -1.5 3.5 14 18 547 551 547 552 0.87 15 19 0.27 7.2e+03 -2.3 0.1 7 12 567 572 567 574 0.83 16 19 9.7e-07 0.025 15.1 2.8 1 11 588 598 588 602 0.93 17 19 0.26 6.9e+03 -2.2 1.4 14 18 612 616 612 617 0.85 18 19 0.00022 5.9 7.6 16.9 3 18 629 645 628 646 0.87 19 19 6.8e-06 0.18 12.4 13.0 1 18 687 705 687 706 0.89
Sequence Information
- Coding Sequence
- ATGGCGCGACGATATCGCGACGCGGCTGCGAAAATGCAACAAAATGTTCAACGACATTTGAAAGACATGAAGGAGCTTTCCTCGTCAGAAGACGAGGATGCTTTCGAGTCCACGGTCCTGGACGGAGTGTTCCAGAGCTACCGGAGCGGCGGAGGCGACGCACACTCCCTGAATCGCACCAAGAATCTTCTAGAAGAGGCGATAAGCGGCCGACCAGTTACTTGCCTTATTTGCATCGGTTCTATCAAAAGAGCTGATGCTATTTGGACTTGCGAGCACTGCCACTCCTACTTCCACTTATCCTGCATCCAAAAATGGGCCAACGATAGCGTTAGCCTACGAACTGAAGAAAACCATGGCCCTATTGCAGTTGTGTTACCGAAAAAAATCGAATGGTGCTGCCCAAAGTGCCGGCATTCGTATTCTAAAGAACAAATACCGAGGAAATACAGATGTTTTTGCGGCAAAATGAATGATCCGCCCGTCCAGCCGTGGTTAGTACCACATTCCTGTGGAGAAGTGTGTGAAAAACGACTTTCGACTGGTAATAATTGTATGCACAACTGCTTGCTGTTATGTCACCCTGGTCCCTGCCCGCCGTGTCCTCAGATAGTTGACGGTGTATGTTATTGTAATAAAGAGCGGAAGAACGTTAGATGCAGTGTTAGTAGATGGTCGTGTGGAAAGAAATGTAGTATGCTACTGTTGTGCAAGTCACATCGATGTGAGAATATTTGTCATGAAGACAGCTGTCCCCCTTGTAGCTTCACGAGCAACCAACCATGTCTCTGTGGTGTTGAAAAAGTCAAACGTCCATGTAATGACCCCAAATGGCGATGCACGAAGCCATGCAATAAACCATTCTCCTGTGGCTACCATAAGTGTGAAACAATATGCCATTCTGGAGATTGTGGTCTATGCCCAAACTCTGGGAAGAAATCCTGTCCATGTGGAGCAAACCAGAGATATGTAGAATGCCCAGATGTTATGGAAACTTGTTTCGGTACTTGTGGTAAGATGCATGAGGATTGTGAACATAACTGTCCAGAGAAATGCCACAAAGGACCGTGTCCACCGTGCCAGGTTTTAATTCAAAAGAAATGTCACTGCTCCGCGCATACTCGTTCTCTGCCGTGCAGCAAAGAGTTTAAATGCGACTCTAAATGCAGAGGAACCCGGCCGTGTGGGAAGCATCCGTGTGCCCGAAAGTGTTGCAATGGAAACTGCCCTCCTTGTGAGAAAATTTGTGACAAACCTCTTCAGTGCAGTCGACACAAGTGCACCACTGTTTGCCACCGCGGCCCTTGCTACCCGTGCCCAAGGGAATCTAAAGTGACCTGCCGTTGCAAGGAAACCTACATTACTATCCCTTGTGGCAGGGAAAAGCAAACAAAACCACCAAGATGCAATCTACCATgtaaaattaagtataaatgTGGTCATGTTGAAGAAAATAAACATTCCTGCCATTTCGGGGATTGCCCTCCTTGCAAAGCTATTTGTGACAAGGAATATCCAGAGTGTGACCACAAATGCAAAGCTATATGCCATGAATATGTTGCAGTTGTCTTCAAACAGGTGGAGAAGCCGGCCACACCATGGGATATTCAGCCCCCGAAGACAAAAATAATGACCTTAGATTGCCCCCCTTGTGAAACACCTGTCTCTGTCATTTGTTTTGGAGAACATGAGACAGAAGAACAACGGTGTCACTCGGCTAAGAGACGACCTTGTGGTCGTGAATGTGGACGCCCTTTGGCTTGTGGGAATCATAACTGCAAATTTCTCTGCCATCTCTATGGCCCTGATTCTGAATATCCAAATGTGCCTTTTAATTGTAGACCATGCGACAGAGAATGCTTGGTTCCCCGTCCAGAGAAATGCACTCATAAGTGTGCTAAGGGTTCATGTCATCCCGGTCCATGTCCACCTTGTGAAATTCTTGAAAGAATCCCGTGTCATTGCGCAATCACTGAATTATACTTACGCTGCCGAGAGCTATCGTCTGCAACTGAAGAAAGCTTATCTTGTAAACAACAATGCCCGAAGAATTTAGAGTGTGGGCACCGCTGTCGAAACAACTGCCATTCAGGACCTTGTGGGAACCAAGTTTGTACCAAAAAGACCAAAGTTTACTGCCAATGTGGTAATTTAAAGAAAGATGCGCCGTGCAATATGGTTAAGAAAGGTGAAACTAACATTGCTTGTGACGATACTTGCAAAGCTAAAGAGATAGCAGCACAAATAGAGAAAGAGAAGGAGGAACAGAGGCAGAGGCAactagaagaagaaaagaacAAGAAAGAGTTGGAAGAGTATGAGTGGAAATTGAGtggaaagaagaagaaatataAAGAAAAGAAAGTTGTGGTTAATCGGGACAATAGGAACGTTTTACATAAGTACTGGGTACCAATTTTATCTGTTTTAGCTGTTATATTTGCAGCTGTATATTACATTGTGTATGTAACATGA
- Protein Sequence
- MARRYRDAAAKMQQNVQRHLKDMKELSSSEDEDAFESTVLDGVFQSYRSGGGDAHSLNRTKNLLEEAISGRPVTCLICIGSIKRADAIWTCEHCHSYFHLSCIQKWANDSVSLRTEENHGPIAVVLPKKIEWCCPKCRHSYSKEQIPRKYRCFCGKMNDPPVQPWLVPHSCGEVCEKRLSTGNNCMHNCLLLCHPGPCPPCPQIVDGVCYCNKERKNVRCSVSRWSCGKKCSMLLLCKSHRCENICHEDSCPPCSFTSNQPCLCGVEKVKRPCNDPKWRCTKPCNKPFSCGYHKCETICHSGDCGLCPNSGKKSCPCGANQRYVECPDVMETCFGTCGKMHEDCEHNCPEKCHKGPCPPCQVLIQKKCHCSAHTRSLPCSKEFKCDSKCRGTRPCGKHPCARKCCNGNCPPCEKICDKPLQCSRHKCTTVCHRGPCYPCPRESKVTCRCKETYITIPCGREKQTKPPRCNLPCKIKYKCGHVEENKHSCHFGDCPPCKAICDKEYPECDHKCKAICHEYVAVVFKQVEKPATPWDIQPPKTKIMTLDCPPCETPVSVICFGEHETEEQRCHSAKRRPCGRECGRPLACGNHNCKFLCHLYGPDSEYPNVPFNCRPCDRECLVPRPEKCTHKCAKGSCHPGPCPPCEILERIPCHCAITELYLRCRELSSATEESLSCKQQCPKNLECGHRCRNNCHSGPCGNQVCTKKTKVYCQCGNLKKDAPCNMVKKGETNIACDDTCKAKEIAAQIEKEKEEQRQRQLEEEKNKKELEEYEWKLSGKKKKYKEKKVVVNRDNRNVLHKYWVPILSVLAVIFAAVYYIVYVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01091368;
- 90% Identity
- -
- 80% Identity
- -