Basic Information

Insect: Tachystola acroxantha
Gene Symbol: -
Assembly: GCA_963506565.1
Location: OY735883.1:2913452-2922234[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.2 2e+02 3.3 0.1 3 23 125 145 123 145 0.94

2 18 3 1.9e+02 3.3 1.5 2 23 149 171 148 171 0.94

3 18 6.4 4.1e+02 2.3 3.5 3 23 176 197 174 197 0.91

4 18 0.12 7.6 7.7 0.1 1 20 423 442 423 443 0.96

5 18 0.059 3.8 8.7 0.5 2 23 454 475 453 475 0.93

6 18 0.95 61 4.9 0.4 1 23 491 514 491 514 0.86

7 18 6.6 4.3e+02 2.2 0.7 8 23 598 614 593 614 0.90

8 18 0.23 15 6.9 0.3 2 23 625 647 625 647 0.88

9 18 0.46 29 5.9 0.6 1 23 652 675 652 675 0.95

10 18 2.3e-05 0.0015 19.4 1.7 1 23 681 703 681 703 0.97

11 18 1.8e-05 0.0012 19.7 1.8 1 23 710 732 710 732 0.98

12 18 0.00011 0.0069 17.3 2.3 1 23 737 759 737 759 0.96

13 18 0.12 8 7.7 2.4 1 23 765 789 765 789 0.96

14 18 2e-06 0.00013 22.7 1.3 1 23 795 817 795 817 0.98

15 18 0.00056 0.036 15.1 3.2 2 23 824 845 824 845 0.98

16 18 0.0016 0.1 13.6 0.6 2 23 855 877 854 877 0.97

17 18 0.00047 0.03 15.3 0.9 1 23 883 905 883 905 0.98

18 18 0.12 8 7.7 4.6 1 23 911 934 911 934 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.2	2e+02	3.3	0.1	3	23	125	145	123	145	0.94
2	18	3	1.9e+02	3.3	1.5	2	23	149	171	148	171	0.94
3	18	6.4	4.1e+02	2.3	3.5	3	23	176	197	174	197	0.91
4	18	0.12	7.6	7.7	0.1	1	20	423	442	423	443	0.96
5	18	0.059	3.8	8.7	0.5	2	23	454	475	453	475	0.93
6	18	0.95	61	4.9	0.4	1	23	491	514	491	514	0.86
7	18	6.6	4.3e+02	2.2	0.7	8	23	598	614	593	614	0.90
8	18	0.23	15	6.9	0.3	2	23	625	647	625	647	0.88
9	18	0.46	29	5.9	0.6	1	23	652	675	652	675	0.95
10	18	2.3e-05	0.0015	19.4	1.7	1	23	681	703	681	703	0.97
11	18	1.8e-05	0.0012	19.7	1.8	1	23	710	732	710	732	0.98
12	18	0.00011	0.0069	17.3	2.3	1	23	737	759	737	759	0.96
13	18	0.12	8	7.7	2.4	1	23	765	789	765	789	0.96
14	18	2e-06	0.00013	22.7	1.3	1	23	795	817	795	817	0.98
15	18	0.00056	0.036	15.1	3.2	2	23	824	845	824	845	0.98
16	18	0.0016	0.1	13.6	0.6	2	23	855	877	854	877	0.97
17	18	0.00047	0.03	15.3	0.9	1	23	883	905	883	905	0.98
18	18	0.12	8	7.7	4.6	1	23	911	934	911	934	0.97

Sequence Information

Coding Sequence: ATGGCTTCAGAGGAATCTGATGACGAACCTCTGTCAATATTAGCTGCAGAGAAAAAACAAAATCCTGAAAAATTCGTTGACGAGTTCGCGGCTCAATCTGAAACTGAACTCGTTTACGAGCCCAAGCGAAAGAGGCGAAAAGTATTGAAGAGAACCCAAGAAACACCATATAAAAAGTTGCCTCTTACTTTTAAATTCAGTCGCAAGTTGAAGAATGCATTGCCTACAGTTATACAGCGGCCTGAAGATGTGTGGTTGTACTTGAAAGATCTTAACCCTTCAGGACCCTATAGTTGTCTACTCTGCTCTGAATGGTTTATAAACAGATCTAAAGTGGTAATTCACTATGTGCTGAACCATAAGAAGGATTTTTGTGGGATTTGTAGGTATTTTGTACCAGATCGGGAGTCTTGGATAGCACATGAAAAGTTCCATACACCATGGCCATGTTCACAATGTGTTGAAAACTTCTTAACCGAGTGTGAATTACGACATCACCTAAGTAGTGCCCACAAACTGGTCCACTGTCGGCTATGTCACTTCCGTGTCCCTGACAATGATCAGTACAACACTCATTTGTTTCAAAAACATAACGTTACAAACGTATCCAGTAAAGATGAAGAGGTTCTATGGGAATTAGAGTATGAGGGCAGCCCTAAATTCTTTTGCTCCCTCTGTGCCAAATCCAACAATACATCAGCAACGTTCTTCAATCATTTCATGGGTTTCCACCATTTCACCCTTAAATGCTTCACAGGTATTATATCTGGCAGAGATCCGCCATTCACTGTTTTTGGAGCCGATGTAAGCCCTAATTTTGTTGAAAGTTTAAAGGATCAGAAGTTTGGTTATGTGGCTTTAGATCCAAAATACCTGGAAACAGAACAAAATACAAATGATGCTCCTGACATAAAGCTTGAAGCACTGAGTGATAATGACAATGAGTATACGAAGCACGACAGTGAAAATATAAGAGAAGAAAGAACACTAAGTGACGATGTTAAAGCCTATAAAGGAGACGAAGACTTTGACATAACACTGATGGAGTTAATAATTCTACAGAAATGTTATTTTGATTACATAAACCGAACATTGAGTGTTATAAACTCCAATCAGGTGCCTGAAAACTCTGACATTAACTATGAGAAAGCAAAAACTGACATTGTAATGGACGTAGACTGTTCTTTATGCAAAACAAAACACCATACTCTTCAAAGTTTTTCAACGCACATGTATAGAATGCATAGTGTGAAATCTGTACCAATATTTTCATGTAGAGTATGTGCAACAACATTCGATAGTCAGAATGAGTTGGATAGTCATATAGGGGAAGAGTTGGGTGAATTTGATGATTTATGGATTTGCCAGTTTTGTGATAAAGAGTTTGATGATAGAGAATCGTCGAGGCGTCATTTGACAGAGCACTGGGATATCATAGAGTTTGACAATTGCTTCAGTCCTCATTTAGGCTTCAAATGCAAGTATTGCCCAACGTTATTCTGGAATGAGACTGATCGGGAAGCGCACCAAGTCAGAGTGCACTTCAACAACTATAGATCACATTATTACAAGTGTGTTAATGAAAGTTGCTCTGAACTGTACAGTGATAAGATATGGTTCATCCACCATTACCTGGAGAAACATCACAAGGAAGAGGCCACAGACCTTATTCTGCTCAAATGCTGCATCTGCTGCATTGTGTTGTCGAGTGTGGAAGACATGAGGGGCCACTTCCTCAGTGACCACCCGGAGGCTAGGAAGATATTTTGTTCTTTGGACGCTTGCCAATATAAGCCGTTAAGCCATAAGAAGTCGTTCCAATTACATTTGAGGTCGCAGCACGGCACAGAAGTACGTAAGGATCGTGCCGCATCGTGCAATATATGCGGGCGCGAGTTCCCAGGTGCACGGGCGTGCAGTGCCCACATGTCCCAGGTGCATGGGCCCGGCAAATACAGGTGCAAGCTGTGCAAGGAGGCGCTGCGCTCCATTGACGAGAGGAAACTGCACTACCTAATCCGTCACCCCGGACAGCACCCGTTTGAGTGCTCGGAGTGCGGCAAGTCGTTCCAGTACAAGTCCTCGCTGTACATGCACCGACAGGAGCACGCGCCGAACAAACAGAACTACACGTGCAACTACTGCCAGAAGGAGTTCGCGAAAAAGGACTCATTCCGGGAGCACCTACAAATCCACGAGGGTCCCCGTCACGCGTGCTCGTACTGCCCGATGCGGTTCGTGCAGCGCTCCAACATGCTGCGCCACGAGCGGCGCCACACCGGCGAGCGCCCGTACGCGTGTCCGCACCCGCAGTGCACGCGCACGTTCGCCGACAAGGGGGCATGCACCTCGCACTCCAGgaCCCACTCAAAGGAAACGTCGTACGCTTGCTTGTACTGCGGCCAGACATTCGTACAGAAGTCTAAACTGACCTACCATATTAGACGGCACACTGGAGAAAATCTGGAGACCTGCACGGTTTGCTCGAAACTGTTCACCAGTCCGTGCTCGCTCCGTGAGCACATGAAGTCGCATGCTCCCAAGAAGAGTCAGTCCAAAGTTAAATGCCCGTTATGTGACCGACAGTACCAAGACGAGAAGTACATGCTCCGTCACTTGCGCACGTCGCACAGCTTCGGCGGCCACTACGAGTGCCCGCTGTGCAAGAAGCACCTGGTCAACGCGGCCGGACTCAGGCACCACGTATTGACACACAGTCCGCTCAATTTGTTCAGGTGCAAATGCTGTCCAAAATCGTACGCAGTGAAACGGACAATGGTGAAGCATCTCCGCAAACGGCACAACATAAAGCCTTTGAACGTCAAAGAATATTACAGCAAACTGGACCCTAGCGAGTGTAAACTAGGCCTTAACGAACAAACAATGAAAGCTATATTCGGACCTATCAAGAGAAACGTTAACGATTTCATTTTAGGCGACTTCGTTAAAGCGATGACATCCAAGGAAGCGAAAAAAAGTGATAGTGGCTCTGACGTTAACGTtgaggatgatgatgatgatgataaatcgAAGGCCAGCAGTGATGGTGATGTTAAGCCGAAGGTCCATCATGATGACGATGGCAATGGTAACGAGGAATTGGAGCCCACAGATTTCGTCAGTGTCAAAATTGAACCCCTGGATGAAGAACCGATTGAGGATGATTGA
Protein Sequence: MASEESDDEPLSILAAEKKQNPEKFVDEFAAQSETELVYEPKRKRRKVLKRTQETPYKKLPLTFKFSRKLKNALPTVIQRPEDVWLYLKDLNPSGPYSCLLCSEWFINRSKVVIHYVLNHKKDFCGICRYFVPDRESWIAHEKFHTPWPCSQCVENFLTECELRHHLSSAHKLVHCRLCHFRVPDNDQYNTHLFQKHNVTNVSSKDEEVLWELEYEGSPKFFCSLCAKSNNTSATFFNHFMGFHHFTLKCFTGIISGRDPPFTVFGADVSPNFVESLKDQKFGYVALDPKYLETEQNTNDAPDIKLEALSDNDNEYTKHDSENIREERTLSDDVKAYKGDEDFDITLMELIILQKCYFDYINRTLSVINSNQVPENSDINYEKAKTDIVMDVDCSLCKTKHHTLQSFSTHMYRMHSVKSVPIFSCRVCATTFDSQNELDSHIGEELGEFDDLWICQFCDKEFDDRESSRRHLTEHWDIIEFDNCFSPHLGFKCKYCPTLFWNETDREAHQVRVHFNNYRSHYYKCVNESCSELYSDKIWFIHHYLEKHHKEEATDLILLKCCICCIVLSSVEDMRGHFLSDHPEARKIFCSLDACQYKPLSHKKSFQLHLRSQHGTEVRKDRAASCNICGREFPGARACSAHMSQVHGPGKYRCKLCKEALRSIDERKLHYLIRHPGQHPFECSECGKSFQYKSSLYMHRQEHAPNKQNYTCNYCQKEFAKKDSFREHLQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHPQCTRTFADKGACTSHSRTHSKETSYACLYCGQTFVQKSKLTYHIRRHTGENLETCTVCSKLFTSPCSLREHMKSHAPKKSQSKVKCPLCDRQYQDEKYMLRHLRTSHSFGGHYECPLCKKHLVNAAGLRHHVLTHSPLNLFRCKCCPKSYAVKRTMVKHLRKRHNIKPLNVKEYYSKLDPSECKLGLNEQTMKAIFGPIKRNVNDFILGDFVKAMTSKEAKKSDSGSDVNVEDDDDDDKSKASSDGDVKPKVHHDDDGNGNEELEPTDFVSVKIEPLDEEPIEDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -