Basic Information

Insect: Tachystola acroxantha
Gene Symbol: -
Assembly: GCA_963506565.1
Location: OY735884.1:2691461-2705376[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 5.2e-06 0.00034 21.5 1.1 1 23 381 403 381 403 0.98

2 11 0.0026 0.17 12.9 1.1 1 23 410 433 410 433 0.98

3 11 1.1 69 4.7 1.2 1 23 437 459 437 459 0.96

4 11 2.6 1.6e+02 3.5 0.7 1 23 464 487 464 487 0.86

5 11 1.6 1e+02 4.2 0.1 2 13 494 505 493 511 0.87

6 11 0.0046 0.29 12.2 0.0 2 20 529 547 528 549 0.93

7 11 0.012 0.8 10.8 0.2 2 23 570 592 569 592 0.94

8 11 0.03 2 9.6 0.5 2 23 641 662 641 662 0.96

9 11 0.28 18 6.6 0.5 2 23 668 689 667 689 0.95

10 11 0.00044 0.028 15.4 1.5 1 23 695 717 695 717 0.97

11 11 3.7e-06 0.00024 21.9 2.9 1 23 723 746 723 746 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	5.2e-06	0.00034	21.5	1.1	1	23	381	403	381	403	0.98
2	11	0.0026	0.17	12.9	1.1	1	23	410	433	410	433	0.98
3	11	1.1	69	4.7	1.2	1	23	437	459	437	459	0.96
4	11	2.6	1.6e+02	3.5	0.7	1	23	464	487	464	487	0.86
5	11	1.6	1e+02	4.2	0.1	2	13	494	505	493	511	0.87
6	11	0.0046	0.29	12.2	0.0	2	20	529	547	528	549	0.93
7	11	0.012	0.8	10.8	0.2	2	23	570	592	569	592	0.94
8	11	0.03	2	9.6	0.5	2	23	641	662	641	662	0.96
9	11	0.28	18	6.6	0.5	2	23	668	689	667	689	0.95
10	11	0.00044	0.028	15.4	1.5	1	23	695	717	695	717	0.97
11	11	3.7e-06	0.00024	21.9	2.9	1	23	723	746	723	746	0.98

Sequence Information

Coding Sequence: atggtttaCCATTGCTATGTTGCGGGATGTAAGAGCATTTGGACGCCTTCCAACACCGTTTCCTTCCATAGactTCCAAAAAACGACAAATTGCGGCGGAAGTGGCTTGATATCGTTGATGTTAATACTGAAAATGAATTTACTAAAGTATGTAGCCTTCATTTTAAACAAGAAGATTTTGTTCAGCATCCGACATTATCCAAAAAGAGGCTGCGAAGACTAAAGCACGgttccgtacctacctacaatctGGACATACCGGAAGGATACCTAAAACATGATATGGACACCCAGTTCAACATAACTCATGACGCAAAATCACaatttCTAAATGTCATTGAAGCATCTGACGTGGAAGCGTGCAGAATCTGCCTGGCTACTGATCTGAAGCTTTACAGCCTCCAAGTTGGAGCACTGAAGGTTTACATGGAGACTATCACTGAGTTCACTGGTAACTGCAGCATCGAGGGTCTGCCTCAGTTCGTGTGCCATGAGTGCGCGGCACAGCTGCTCAAGTGCTACAGCCTGTTGGAGCGGAGTGCCAGAGCACAAACGGTTTTGATCGACATTTATGCACAGAATGGAAAGATCACAAAGAATCTAATAATAAATCTGGATAGACAATCGTTAAATCTCACATCACTACAAACCCACAACGTGACTCCTACGAAGGTGTATAATTACCAATACGATGACAAACATAGCCATTCCGACCTTATTAGTACTGCCTTTATTGGCAAAGAACAAAAAATGTCAGACAAATTCAAACTAGAAGAAATTATATCTGGTGAAGAATTTCCAATAGCATATAAATCGGAAGCAGATCAAAAGATTAATTATGATGCTAATGATGGTCagaatgataatgataatgttCTAGAAATGTTTGTTGAAGTTggtgataatgatgatgacgaaATAAAAAGGAAGGTTATAAAAGGAGAATGTCTAGAAAAAAAGTCAAAAGCAAGCAAAACTAAAACGAAGAATAAGTACAAAAGTCGTGTTGGCGTACGATTGCCTTTTGACACTCGAATGCAGGAGTATTTCAACATAGTGAAACTGTCTTCTttaCAGGAACAGATGGACGAATGGCAGAAGTCTGTTAAGGATTGGGCTAAACATTTGGAGCATTTCAACTTTCAATGCGAGAAGTGTTCTAAACCGTTCGCGACCCAGAGCTCGTACAACACACACATGGTCAGCCACGATCCGAGTCACGGCAACTTCGAGTGTCCCGTGTGCTACCAGCGGTTCAAGAGCGAGCCCAAGAAGCGTCTCCACATCCGCACCACGCACAATAAGAAGTACTACTGCAAGACTTGTCCCGCCGTGCGAACACATGTGAGCGGCGCGCGAGCGCACTATAAGTTCCACGCGGGCCACGTGTACTCGTGCGAGTACTGCCCATTCACCAGCAATAAAACGGGCGTCGTGTACTCGCACGCGCGGCGCCAACACGCGCAGGCGACCGCCTGGTCGTGTCGCTACTGTGGACTCGCCTTTAGCGAGAAGGGGCTGCCACAACATGTCGCGCATATGCATAAGGATTGCGAGGCCACAGACGGCACAAGCGAGTGTGTGCGTTGCGCGGAATGCGATGTTTCCTTCGTGACCGCGGCCGCGCTCAGGGTGCACCGACTCAACGCGTCACAACACACCATGGACAAGGAACGTGTTATCGCAATGGATGGCGCATTGCAAACTACTTGCAACGTGTGCGGCGCGCAATTCGACTCCTCTAATGAGATGCACGCGCACGCGAGGGCGGAGCATTGCGCGCGACGCTCCGCCTCGCCGGCGACCGCTTACCCCAAGAAGTGTGATCATTGCGATGAGACGCTGCTCAGCCGCCGGCAGCAGTGCTGGCACGCGCGCCAGCGGCACCCGCGCGAGGCGGCCCCGCGAGCCGTGCGCGCGGTCTGCGAGACGTGCGGGAAGGGATGCCAGGACATAGCACAACTGCGTCTCCACGAGTTGCGTCACCGCAGCCCGTCCCTGCGCTGCGCCTCGTGCCCCAAGCTGTTCCACGACCGGTACCGGCTGGCTGCGCACGCGGCGCGACACGGGGACGCGCGCCCCTACGCGTGCGCGCAGTGCGGACGCGCGTTCAAGTACAGGGCGAACCTCAAGTGCCACTTGAAGGTGCACTCTGACGTGGCTCCCTACGAGTGCTCGTTGTGCCACAAGACGTTCAAGTATTCCAGCAGCCTCAACCTGCACGTGCGCTCCGTGCACCAGAAGATACCAACCAAACCAAGGAAGCCGAGAGTCAACCATGTGAATGTAATCAATAAATGA
Protein Sequence: MVYHCYVAGCKSIWTPSNTVSFHRLPKNDKLRRKWLDIVDVNTENEFTKVCSLHFKQEDFVQHPTLSKKRLRRLKHGSVPTYNLDIPEGYLKHDMDTQFNITHDAKSQFLNVIEASDVEACRICLATDLKLYSLQVGALKVYMETITEFTGNCSIEGLPQFVCHECAAQLLKCYSLLERSARAQTVLIDIYAQNGKITKNLIINLDRQSLNLTSLQTHNVTPTKVYNYQYDDKHSHSDLISTAFIGKEQKMSDKFKLEEIISGEEFPIAYKSEADQKINYDANDGQNDNDNVLEMFVEVGDNDDDEIKRKVIKGECLEKKSKASKTKTKNKYKSRVGVRLPFDTRMQEYFNIVKLSSLQEQMDEWQKSVKDWAKHLEHFNFQCEKCSKPFATQSSYNTHMVSHDPSHGNFECPVCYQRFKSEPKKRLHIRTTHNKKYYCKTCPAVRTHVSGARAHYKFHAGHVYSCEYCPFTSNKTGVVYSHARRQHAQATAWSCRYCGLAFSEKGLPQHVAHMHKDCEATDGTSECVRCAECDVSFVTAAALRVHRLNASQHTMDKERVIAMDGALQTTCNVCGAQFDSSNEMHAHARAEHCARRSASPATAYPKKCDHCDETLLSRRQQCWHARQRHPREAAPRAVRAVCETCGKGCQDIAQLRLHELRHRSPSLRCASCPKLFHDRYRLAAHAARHGDARPYACAQCGRAFKYRANLKCHLKVHSDVAPYECSLCHKTFKYSSSLNLHVRSVHQKIPTKPRKPRVNHVNVINK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01401369;
90% Identity: iTF_01401369;
80% Identity: iTF_01401369;