Basic Information

Insect: Tachystola acroxantha
Gene Symbol: -
Assembly: GCA_963506565.1
Location: OY735898.1:6221702-6224353[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.6e-06 0.00017 22.4 0.8 1 21 175 195 175 196 0.96

2 10 0.096 6.2 8.0 0.1 1 23 229 252 229 252 0.93

3 10 0.00021 0.013 16.4 3.5 1 23 257 279 257 279 0.97

4 10 0.022 1.4 10.0 4.8 3 21 284 302 283 303 0.95

5 10 0.00068 0.044 14.8 1.8 2 23 347 369 346 369 0.95

6 10 0.033 2.1 9.5 0.6 3 23 377 396 376 396 0.96

7 10 0.0093 0.6 11.2 1.9 1 23 402 424 402 424 0.98

8 10 0.014 0.89 10.7 0.8 1 23 430 453 430 453 0.94

9 10 0.0009 0.058 14.4 0.3 3 23 465 486 464 486 0.97

10 10 0.084 5.4 8.2 6.0 1 23 496 518 496 518 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.6e-06	0.00017	22.4	0.8	1	21	175	195	175	196	0.96
2	10	0.096	6.2	8.0	0.1	1	23	229	252	229	252	0.93
3	10	0.00021	0.013	16.4	3.5	1	23	257	279	257	279	0.97
4	10	0.022	1.4	10.0	4.8	3	21	284	302	283	303	0.95
5	10	0.00068	0.044	14.8	1.8	2	23	347	369	346	369	0.95
6	10	0.033	2.1	9.5	0.6	3	23	377	396	376	396	0.96
7	10	0.0093	0.6	11.2	1.9	1	23	402	424	402	424	0.98
8	10	0.014	0.89	10.7	0.8	1	23	430	453	430	453	0.94
9	10	0.0009	0.058	14.4	0.3	3	23	465	486	464	486	0.97
10	10	0.084	5.4	8.2	6.0	1	23	496	518	496	518	0.97

Sequence Information

Coding Sequence: ATGAGTCGCGAGGTGGATATTAAAGCTTTGGTGTCCCATATAGTGAGAGGAGACGGCGCCGACAAATGCCGCATTTGCCTTGGCGATACGACGGATGGGCAAGTCTATCTCGGAGACACGGTCATGATGGATGGAGAGCGGCCAATAACGCTTTCAGAACTTCTGGAAACTATCACAGGAGTCAAGGTACTGCAGGAAGACGACCTGCCTCCAGGCCTGTGCCCCATATGCTCAGACTCCGTTATAGCAGCTGGAGGGTTCCGCAATCTTTGCCTTCGCTCTCAAGAGACTTGGAACTCGACGCTGGATTTAATACACCACTTACCCGCTACCGACGATCTCAATAATAAACAATCTGTCTATTTAATTCTAGCGGACCAAGAAATTACTGTTATAGATAATTATATTGACGATAATGATAATAACTCTAGTAGTTCATTACGTGACTGTGAAGAAGAATCTGTAACGAAGGCAGTATTAGGACCGAAGCCAAGAGTATTCAAAGAGAACGAGGAAGATATCTACCAGTGCCCCGATTGCGGCAAATATTTCAGCCGTCTAGGACAATTGTGTGAACACTTAAAAGAATCAATGGATTTCAAAAGAGCTTGCTACATTTGTGCTTCAATCATGACGAGGGATGACTTGGTTGAGCATTTGAAAAGTGTCCATAGACGGACCCCGTTTGCTTGTGATAAGTGTCCAGCGTTGTTCCAAGATAGGAATCGGCTTAGGAGTCATATCGAGGAGGCTCATTCAGCGGGCGCGTACAATTGTGTAGACTGTGGGAGAACTTTCAAGTCCTCACACTCATTCCACGGTCACATTTCAGTCCACAGCAACAGGTTCTGCCCGGTCTGTGACAAACAATTCCGTAACAACAGATGCTATTTGCACCACGTAAGACACTGCTGTAAAATGGACAGAAAACAGTCCTACGCACCCAAAAAACCAAGCAGAGCTATTTTTGAagtaattaataagaaaactgAGAAGAAAATCAAAGTAGGAGCCCGTGGAAGTTCGGACACAGAGTGCATTTGCGATTATTGCGGTAAAACATTTGCTGGGAAGAAGTTTGTTTGCGCTCACATACAAATAGTCCACATGAAAAACACTCATCGACCCTGTCCGTACTGTGGGAAGTTCCTCGCGAAGTCCCATTTGCCATCCCACATTAAAACTCACGGGAGACGTCCAACGTTCACTTGTGAACACTGCAATGtcttatttaaatctaaattaggTTATATACAGCACGTTCGGCTTCACACCGGGGAGCTGCCTTACCTTTGCAAGTATTGCCCGGAGTCTTTTTCAGCGTCCTCGAGACGGTCTGAGCATGTACGTAAGATGCATAAGACTGATGAGGAGAGAATCCTTAGAAATGCTTGCGAGTTCTGTCCGGCTCGCTTCCGTCTTCCTTACAGACTTAAGAAACACATGTTGACTGTACACGGAGAGAAGTCTAGTTACCGTAAAGAGTTTGAATGctcccaatgtcatgttatgtTTGCTAGTTGTCGGGGCCTCTTGCACCACAGCAGGCAACACCAAGAGTTTACTTTTCAATCTTCGAAAAAGACAAGGCTTTCAAACGCAAATTCTAAGGGAGAAGCTTAG
Protein Sequence: MSREVDIKALVSHIVRGDGADKCRICLGDTTDGQVYLGDTVMMDGERPITLSELLETITGVKVLQEDDLPPGLCPICSDSVIAAGGFRNLCLRSQETWNSTLDLIHHLPATDDLNNKQSVYLILADQEITVIDNYIDDNDNNSSSSLRDCEEESVTKAVLGPKPRVFKENEEDIYQCPDCGKYFSRLGQLCEHLKESMDFKRACYICASIMTRDDLVEHLKSVHRRTPFACDKCPALFQDRNRLRSHIEEAHSAGAYNCVDCGRTFKSSHSFHGHISVHSNRFCPVCDKQFRNNRCYLHHVRHCCKMDRKQSYAPKKPSRAIFEVINKKTEKKIKVGARGSSDTECICDYCGKTFAGKKFVCAHIQIVHMKNTHRPCPYCGKFLAKSHLPSHIKTHGRRPTFTCEHCNVLFKSKLGYIQHVRLHTGELPYLCKYCPESFSASSRRSEHVRKMHKTDEERILRNACEFCPARFRLPYRLKKHMLTVHGEKSSYRKEFECSQCHVMFASCRGLLHHSRQHQEFTFQSSKKTRLSNANSKGEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -