Tacr023106.1
Basic Information
- Insect
- Tachystola acroxantha
- Gene Symbol
- Znf296
- Assembly
- GCA_963506565.1
- Location
- OY735899.1:319731-330785[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0025 0.16 13.0 1.9 1 23 235 257 235 257 0.98 2 10 0.0021 0.14 13.3 2.3 1 23 318 340 318 341 0.95 3 10 0.0007 0.045 14.8 0.4 1 23 345 368 345 368 0.96 4 10 0.0043 0.28 12.3 0.0 2 22 381 401 380 401 0.94 5 10 0.83 53 5.1 0.3 3 23 414 435 413 435 0.93 6 10 0.013 0.86 10.7 2.1 3 23 443 464 441 464 0.94 7 10 0.00021 0.014 16.4 1.3 2 23 487 508 487 508 0.97 8 10 0.048 3.1 9.0 0.1 1 11 514 524 514 530 0.92 9 10 6.1e-06 0.00039 21.2 2.0 1 23 554 576 554 576 0.94 10 10 2.1e-06 0.00014 22.7 1.5 3 23 584 605 582 605 0.97
Sequence Information
- Coding Sequence
- ATGGAGGATATACTTGCGTGCCGTGTCTGCCTCGCTACAGATATGAAACTCTTTAATATATTCAAATACAACTTAGCTACAACTTTTTCAATTCTTATTGGAACCCAGGTATCAGCTAAGGATGGTATGCCGCAGTATCTCTGCACATTCTGCAGTGCCTTACTGAGGAAATGCGCTACATTTCAGGACAGAAGTCTGAGGGCACAGCAGCTTCTAAACTTTGTTATATTGCATCAAGAGACGCTAACAACAGACTACATTCGAACCATAGATCGGGAAACACACAATCTAACTCCACCTTACAGCACCCATTACAACACCATCATCAAAGATGAATTCATCCATAAAGACATTGAAGATAATACTTACTCAATGGTTGAAGAAAAGGCAAAAACGTCATCTGAGGAAAACAGTTCAAGCAGCGACGAAGAACCATTAGCAAAGAAAATAGTGAAGAAGAAACGTAAAAAGAAACGCAAAAATGAAGAAAAGTACCTTGATGtagaaattaaaaatgaaacggCATCGTTAGTTGACGAGACAGATGTGAACGATGATTTTGACCAAAATTTTGACAACGATAAAACAGATTTTGACTGTATAGATGTCCGTGATGATATCGATGTGGTGACGTTGACCAAACAGCAGCAAATAGATGAGATCCAAGCCAGGAAGATGtcacataattatttaaattcaatcTTTAAGTGTAGCAAGTGTTTTAAAGGGTTTATGTCGGATGCAACATACACGAATCACATGGCCAGACATGATCCCGCGTCAGGAGACCACGTGTGTAGTATATGCGAGACTCGGTGGACGTGCGTAAGATCCCTACGAGCGCACGCAATGACGTCACACGAAAGAAAGTACATTTGTAAGAGATGCAACCATGTCTCTAAATCTAGTCACCGCGCTAAGGAACATTGTAAATGGCACGACGGATATATGTACGTATGTGACATCTGTGGAGCTTCCTTTAGTAAGTCTACAAGCCACCTCACCCACATCCGGCTGCATCACCCGTCCGGCCACTCGTGCgacgtgtgcggcgagtccttTATAGGCGAATATGGACTCAATATGCATAAGAAGAAGGCACATCGCGATACAGAgAGTACCCGAGTGAAGTCAGAGTCTCAGTGCGTGATATGCGGCGTGCAGTTCCGGAGCTTGGAGGCTCTGGAGACGCACGTTAACACGTCCAAGGACAGCATCTGTGACCCTAACGTCAGATCCTGTGTGTTGTGCGGATGTAACTTCGAAGCCGATGAACTGTTGAGTGAACATATGCAGGAGTTGCATCAGAAAGACCAGACCGTTAACTGCGGGGAGTGTAACAGAAAGTTCGCCAACTCGCGCACCTACTCGGTCCACTATCAACACTTCCACCTGGGCGCGTCGTCCCTGCGGCTCCGGGGGCGCCGGGCGGAGCGCCGCGCGCCGGGGCAGAGCGCCGTCTGCGAGGTGTGCGGCAAGCAGTGCATGTCTAAGGCCACCCTGATCTACCACCAGCGCACTCACACCGGGGAAAAGCCGTATCAGTGCAGCGAGTGTCCAAAGAGGTTCAGCATCCTACAGCGGCTGCAGGTAGGAGGGTTCGGGGAGGGAATATTTCAGTTCCAGATTCATCTACGAACGCACACAGGAGAACGACCATTTAAATGCTCCCACTGTCCCAAGGCATTCAAGCAGAAAGCGGCGCTCAACAGGCATGATAGGGTCCATTCTGGCGCCAAGCCGTACGGGTGTCCTCACTGCGGGAAGACGTTCTCTCAATCCAACTCCATGAAGATGCACGTCCGGACGGTACACCTCAAGATGCCGGCGCCGTACCGGACCAACCGGAAACATAAACTGGAGTGA
- Protein Sequence
- MEDILACRVCLATDMKLFNIFKYNLATTFSILIGTQVSAKDGMPQYLCTFCSALLRKCATFQDRSLRAQQLLNFVILHQETLTTDYIRTIDRETHNLTPPYSTHYNTIIKDEFIHKDIEDNTYSMVEEKAKTSSEENSSSSDEEPLAKKIVKKKRKKKRKNEEKYLDVEIKNETASLVDETDVNDDFDQNFDNDKTDFDCIDVRDDIDVVTLTKQQQIDEIQARKMSHNYLNSIFKCSKCFKGFMSDATYTNHMARHDPASGDHVCSICETRWTCVRSLRAHAMTSHERKYICKRCNHVSKSSHRAKEHCKWHDGYMYVCDICGASFSKSTSHLTHIRLHHPSGHSCDVCGESFIGEYGLNMHKKKAHRDTESTRVKSESQCVICGVQFRSLEALETHVNTSKDSICDPNVRSCVLCGCNFEADELLSEHMQELHQKDQTVNCGECNRKFANSRTYSVHYQHFHLGASSLRLRGRRAERRAPGQSAVCEVCGKQCMSKATLIYHQRTHTGEKPYQCSECPKRFSILQRLQVGGFGEGIFQFQIHLRTHTGERPFKCSHCPKAFKQKAALNRHDRVHSGAKPYGCPHCGKTFSQSNSMKMHVRTVHLKMPAPYRTNRKHKLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -