Basic Information

Insect: Tachystola acroxantha
Gene Symbol: -
Assembly: GCA_963506565.1
Location: OY735895.1:1276984-1311950[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0017 0.11 13.5 0.2 1 23 483 505 483 505 0.97

2 8 2.9e-05 0.0019 19.1 0.3 1 23 511 533 511 533 0.98

3 8 0.0034 0.22 12.6 2.2 1 23 540 562 540 562 0.99

4 8 1.2e-05 0.0008 20.3 0.1 1 23 568 590 568 590 0.93

5 8 7.6e-07 4.9e-05 24.1 0.1 1 23 596 618 596 618 0.98

6 8 6e-06 0.00039 21.2 1.2 1 23 624 647 624 647 0.96

7 8 0.00024 0.016 16.2 5.2 1 23 653 676 653 676 0.95

8 8 0.00028 0.018 16.0 1.3 2 23 706 727 705 727 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0017	0.11	13.5	0.2	1	23	483	505	483	505	0.97
2	8	2.9e-05	0.0019	19.1	0.3	1	23	511	533	511	533	0.98
3	8	0.0034	0.22	12.6	2.2	1	23	540	562	540	562	0.99
4	8	1.2e-05	0.0008	20.3	0.1	1	23	568	590	568	590	0.93
5	8	7.6e-07	4.9e-05	24.1	0.1	1	23	596	618	596	618	0.98
6	8	6e-06	0.00039	21.2	1.2	1	23	624	647	624	647	0.96
7	8	0.00024	0.016	16.2	5.2	1	23	653	676	653	676	0.95
8	8	0.00028	0.018	16.0	1.3	2	23	706	727	705	727	0.96

Sequence Information

Coding Sequence: ATGAGTCAATGTTGCTTGGTATGCAACGGTCGCATGGGAGTCAAACAGAGGCTAGCTACCAACATATTCAAAGAAAAGACAACATCAGGAAAAGGTTTATCTGATGTCTTGAGTGAGATCTTGGACAAGTCTCTACCGGCAACCGCTCTGTACTCCGATGTGATATGCAAGAGATGTCATAGGACTTGCTCCGAGTATGAAGCCGCTAAAGAAAGAATACAACAACTAAAAAGCGACCTCATATCCCAGTTTAAAGCAACGTTACCTAACCACAATTTAGCTTACGAAACAATTTGGGAAACAAAAAGCCCTAAAGATGGCAACACTGATCGGAGAGTCGGGAAACGCGTGGTGTTGCCAGCGTCGAAACTGCAGCCTTTACCGCCGGATTACGTGATAGATGTCACTAAGCTCGCTTCTGGACTTGTGTCGAACAAAGCGACTAAAATAAcgAATACAATCACCCCAATTCTCACTAACAGTATGAAAACTTCACCAAAAACATCGAGTTTTAAACCTACAAAAATGCAAGATTTAGTTACAAATATCATCCAAGACATAACTCAGTCGTCGAGTGATACGAAATCGTTGTGTTTCAATGCGGTGCCGAAAGATATCCTCGCTTCGGCGGTTTTAGCGAAATTGAACTCTAATATTAACGAGAAGAAAGACGTTGGTGCTAGTGATAGTATGGAGATTGATGAAGATTGCACTCCAGGGGATGTTTCGGACGAATTACAGGTTAATTCCAATGCCTCCCAGTCTGAGTTCCTCGATCTGGCCGCATCAGACTCCGAGGGTCGGTCCGCCGGAGACGAGCTCGAACTCAGGGAGCTCAGGGTGCTCAATGACGAGGACGAAGATGATGAGGAAACAATAGTTATGTCTGCGGAGAACGGTTCTATCCTTCGCGTGGTTCGCGGTCAGACGCTGGTGTACAAGGGAGGCAAGATGGCGCTACGGGACGGCTCCGAGCCGGCGGACGACCCGGAACAGGACGCAGGCAACGAGTCCAATGACGACTCACAGATCGAGCTACAAGTGTCGGGCGACGAGGAGACAGCCAATGCCATAATTGCCGCGGCGCAGGAGAAAGGCGGCGCCTTCATAAAAGTGGAGTCCGGTGAGATGTTTCGTGTGAAGTCTGTTCGAAGCAAGACGGAAGCCGAGCCGACGACCACTGTCAAAGAACCGCCGCCGATAGTGGAACGCGATGGCGATATATTCAAATGTTTAATATGCGAGAACATTGGAAAAGGCGCCGAGTGCCGCACGCGCGACCCCAGTGAGAtcgcgcgccacgcccgcgcgtGTCACCGCGCGCGCGTGTACGTGTGCTCGCGCTGCTACGCGGTGTCGCGCCGACACGACGCGCACATAGTGCACACCAAGCAATGCTGGAAGCATAAAGAGAAGCACAGCAAGACGCCGACGGAGAAACGTGTGCACGAGTGTGATATCTGCCTTAAGACATACAATTCGCGCGCGCTGCTCGCCGAGCACGCGAACGTGCACAGCGGCGCGCGCCCGTACGCGTGTCCCGCGTGCGCTAAGAAATTCGCCTCCAAGTACACGCTGCAGGCGCACCTCAAGACACACCAGGATCGTCCCCGCCCGTACCAATGTTCGCTGTGTCTCAAGACGTTCCTCACCACGACGAATCTCAAGCAGCACGAGAACACGCACTCAAGCGACAGACACTTCGTTTGCACTGAATGCGGCAAGGCGTTCGCCTCGCAGCACAGCCTGGAGGTGCACGGCGTGGTGCACTCTGGCAGCAAGCCGTTCGTGTGCGGCGTGTGCGGCAAGGCCTTCGCCAGGCGCGCAGAGGTCAGGGACCACATGCGCACGCACACTGGCGAGCGGCCGTTCGAGTGCGAGCAGTGCGGCGCATCGTTCGCGCAGCGCTCCAACCTGCACACGCACCGGCGCGCCACGCACATGAACGACCGCCCATACCACTGCGCGCACTGCGACAAGCGGTTCAAGCGACGCAGACTGCTAGAATACCACATCAAGGCGACGCACACTGGAGAGCGGCCACTGCCGTGCGCCACGCGACCCTCACTGCTCGAGTACCACATCAAGGCGACGCACACCGGCGAGCGGCCGCTGGAGTGCGAGGTGTGCCACGCGACCTTCGTGTACCCGGAGCACTATAAGAAACACGTGCGCGGTCACAGCGGCGAGCGCCCGTTCGAGTGTGAGGCTGTCTGCGTCCGCGCCGCGCCCTCGCGCCGGCCGACCCCGCCTGACCCCGCGCCGCCCGCTCGCCGGGCGCCGGGCCGTGTGCTGACCCGTGCTGTGCCGCGCTGCGCCGCCCTGCACCAAGCCGCCAAGGGCTACAGGACCGCGCGCAGCGCTCGTGCCAGTCTGGTTTGA
Protein Sequence: MSQCCLVCNGRMGVKQRLATNIFKEKTTSGKGLSDVLSEILDKSLPATALYSDVICKRCHRTCSEYEAAKERIQQLKSDLISQFKATLPNHNLAYETIWETKSPKDGNTDRRVGKRVVLPASKLQPLPPDYVIDVTKLASGLVSNKATKITNTITPILTNSMKTSPKTSSFKPTKMQDLVTNIIQDITQSSSDTKSLCFNAVPKDILASAVLAKLNSNINEKKDVGASDSMEIDEDCTPGDVSDELQVNSNASQSEFLDLAASDSEGRSAGDELELRELRVLNDEDEDDEETIVMSAENGSILRVVRGQTLVYKGGKMALRDGSEPADDPEQDAGNESNDDSQIELQVSGDEETANAIIAAAQEKGGAFIKVESGEMFRVKSVRSKTEAEPTTTVKEPPPIVERDGDIFKCLICENIGKGAECRTRDPSEIARHARACHRARVYVCSRCYAVSRRHDAHIVHTKQCWKHKEKHSKTPTEKRVHECDICLKTYNSRALLAEHANVHSGARPYACPACAKKFASKYTLQAHLKTHQDRPRPYQCSLCLKTFLTTTNLKQHENTHSSDRHFVCTECGKAFASQHSLEVHGVVHSGSKPFVCGVCGKAFARRAEVRDHMRTHTGERPFECEQCGASFAQRSNLHTHRRATHMNDRPYHCAHCDKRFKRRRLLEYHIKATHTGERPLPCATRPSLLEYHIKATHTGERPLECEVCHATFVYPEHYKKHVRGHSGERPFECEAVCVRAAPSRRPTPPDPAPPARRAPGRVLTRAVPRCAALHQAAKGYRTARSARASLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -