Basic Information

Insect: Tachystola acroxantha
Gene Symbol: -
Assembly: GCA_963506565.1
Location: OY735880.1:2719971-2734449[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.25 16 6.7 1.6 1 23 373 395 373 395 0.98

2 12 0.0007 0.045 14.8 1.0 2 20 403 421 402 425 0.90

3 12 0.17 11 7.2 1.8 1 23 429 451 429 451 0.97

4 12 0.002 0.13 13.3 1.6 1 23 456 479 456 479 0.98

5 12 0.1 6.5 8.0 0.0 2 23 484 506 483 506 0.93

6 12 0.019 1.2 10.2 0.1 2 20 517 535 517 537 0.95

7 12 0.0003 0.02 15.9 0.3 3 23 549 570 549 570 0.91

8 12 1.9 1.2e+02 3.9 0.2 3 23 584 605 583 605 0.94

9 12 0.00032 0.021 15.8 0.3 1 23 632 654 632 654 0.98

10 12 2.2e-05 0.0014 19.5 1.2 2 23 661 682 660 682 0.96

11 12 6.2e-05 0.004 18.1 6.4 1 23 689 711 689 712 0.95

12 12 0.001 0.065 14.3 4.6 1 23 718 741 718 741 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.25	16	6.7	1.6	1	23	373	395	373	395	0.98
2	12	0.0007	0.045	14.8	1.0	2	20	403	421	402	425	0.90
3	12	0.17	11	7.2	1.8	1	23	429	451	429	451	0.97
4	12	0.002	0.13	13.3	1.6	1	23	456	479	456	479	0.98
5	12	0.1	6.5	8.0	0.0	2	23	484	506	483	506	0.93
6	12	0.019	1.2	10.2	0.1	2	20	517	535	517	537	0.95
7	12	0.0003	0.02	15.9	0.3	3	23	549	570	549	570	0.91
8	12	1.9	1.2e+02	3.9	0.2	3	23	584	605	583	605	0.94
9	12	0.00032	0.021	15.8	0.3	1	23	632	654	632	654	0.98
10	12	2.2e-05	0.0014	19.5	1.2	2	23	661	682	660	682	0.96
11	12	6.2e-05	0.004	18.1	6.4	1	23	689	711	689	712	0.95
12	12	0.001	0.065	14.3	4.6	1	23	718	741	718	741	0.96

Sequence Information

Coding Sequence: ATGTTCGATCTAAAATACTGCAAACTTTGCCTGGCGACCGATGTCAAGATGTCCAAAATGAATCATGCGATTCACCAAGCCTATTCGAATCTTATTCGTTTGCCTTTATTCACCCACGAGCCGTACATATGCTATGAATGTGCAGCTTTACTGCGGAAGTACAATGTGTTTTACACAAGATGCCATACGGCGCACACTGTACTTGCGGCCATACATAAAAATTCAAAGATAACTAAGCAAGCTGTTAAAGCAGTAAACAGAGAACAGTCTAATTTGGAGTCCAAATTGAGTCAGTCGTTGACTTCGATTGTAACATCAGGGATTGAAGGCAAAGAGGAGTACCAACATTTTGTTGTTATTAAAAATGAATTTACCGATAGCACACTACACGAAGATACTAGTGTCACTACCGATGCTACTTCTTATCTAACTCTTGAATATTCAGGAGATACTAAACAAGTTCAAAAATCGGATAACAATCCAGCTGAACATAAGTCAACAGATCGTGACGGAGACAAAGTAGAACTAAGAGTTGACATAACTAGCGAGGAAATTGCTGATACGTCTTTTACTGACACCGATAATGACGATATGCCAGTAATATCTAAAGTTGAAACTATAGAGGCTCCAGAAGAAGATTGCTTACCAAATAAAGATACAAATGTCGATAATGCTGTTTCTAATATATCTGTTAAATATTCCGGACATTTTGTAGACGATAAATTTTCGTCGCATGACGTTTCACCTAAATTAAGTGCAATTAAACCtaaaattggtttaaaaaattctaaatcaacaaagaaaaaaagaaataatattGTGAAACCGAAGTCTCTTCCCAAAATCAAAGGAAAACCTGTAAAAAAGTGTAAAAAAGATAATATAAAAGCCAATAAAAAGAGCAGACCAGTAAAGAAGTCTTCAAATATAATCAAAGATGGAGGGACTGAATTAGGAAAAACAAAAGATTCAGATAGCGTTGCCAAAACTAAAGCTAGCGGTAGTAATAATCAAAAATCTTTCGAAGACCTTATGAAAATAGAAGTGCTAAGTCCGACAGCAGCGAAGGAGGAAATCCTGAATCGAAAGGAGTCCAGCAATTACATACAATCCATATACAAGTGTGAGTTTTGCTTTAAAGGGTACCAATCTGTAATTACATTTGGGAACCATATCAAGAAACATAGTGCTGAATTCGGTGATCTACAGTGTTGGTTCTGTAATATGAGGTTTTCCAACAAAACTGCCTTGAAACGTCACACAGGCGACCAACATACATATAAGTACCATTGCCAGAGCTGCCCCTTTGTTTCATCTAACAGGACTAATGCAAAATCACACCTCAGCATTCATTCGGGCAAGAAATACGTGTGTGCGGAATGTGGGGACACTTTCAACCTGCAGCACAGCCTGCTGAACCACCGGCGCAAGCGTCACATGACCGAGTCTGTGTGCGCGCTGTGCGGCAGCGGGTTCGCGTCGGCGCGCGGGCTCGCCCTGCACATGACGCTGGTACACAAGCTGGACAAAATCGAAGTGAATGGCCCAAAATGTGAGGAGTGCGATATTCAATTCGCCACGGACGCAGGCTTGAAGCGACACCATGTGCTCTCGTTAAAGCATAAACATAAAATTAGCAACGGCTGTTCAGTATGTGGTGAAACATTTGACGATAAAAACTCCTTACGGAAACATGTGGATGCATCTCACTCCGTTGAACGTAGACCGGCCAAACAGTTCCCAGCCGCTTGCAACATCTGTAATCAATGGCTGAAAAGCTACGCGAGTTATCTGTCTCACATGAAGGCGCAGCACATTAAACCTGGCAATGTGAAGAAATCAAATCATATGAAGTCACAAGACGAAAAGGGCGATAAAGATTCCAACCAGGCGTATATATGCGAAGTATGTGGGAAAGTACTGAAGAACCGTCAATTCCTAATATACCACGTGCGCAATCACACCGGCGAGCGTCCGTGCAAGTGCTCTGAGTGCGGCAAGTCGTTCTCTAACCCCGTGGTGCTGTCGTCGCACCGCGCCACGCACCGCCCGCGGCCCGGCGGACACCCGTGCGAACAGTGCCACAAGGTGTTCGCAAACAGGACCAACCTCACCATACACAGGAAGCGCCACCATCTCGGCATCCTGCCCCACAAGTGCGACATATGCGGGCGCGGCTTCAGCTACGCGTGCGAGTTAAGGCTGCACGTGAAACACTCTCACGACAAGGTGCCGTGGCCCAAGCCCAAGCCAGAGGCAAAGGGCACGCGGAACATGAGCCGACAACCGGTTGCCACACACAGTGTCAGTGTTGCCACAACGGTCACAGTACAGAATTGGGAGTACGGACCAAATACTTGA
Protein Sequence: MFDLKYCKLCLATDVKMSKMNHAIHQAYSNLIRLPLFTHEPYICYECAALLRKYNVFYTRCHTAHTVLAAIHKNSKITKQAVKAVNREQSNLESKLSQSLTSIVTSGIEGKEEYQHFVVIKNEFTDSTLHEDTSVTTDATSYLTLEYSGDTKQVQKSDNNPAEHKSTDRDGDKVELRVDITSEEIADTSFTDTDNDDMPVISKVETIEAPEEDCLPNKDTNVDNAVSNISVKYSGHFVDDKFSSHDVSPKLSAIKPKIGLKNSKSTKKKRNNIVKPKSLPKIKGKPVKKCKKDNIKANKKSRPVKKSSNIIKDGGTELGKTKDSDSVAKTKASGSNNQKSFEDLMKIEVLSPTAAKEEILNRKESSNYIQSIYKCEFCFKGYQSVITFGNHIKKHSAEFGDLQCWFCNMRFSNKTALKRHTGDQHTYKYHCQSCPFVSSNRTNAKSHLSIHSGKKYVCAECGDTFNLQHSLLNHRRKRHMTESVCALCGSGFASARGLALHMTLVHKLDKIEVNGPKCEECDIQFATDAGLKRHHVLSLKHKHKISNGCSVCGETFDDKNSLRKHVDASHSVERRPAKQFPAACNICNQWLKSYASYLSHMKAQHIKPGNVKKSNHMKSQDEKGDKDSNQAYICEVCGKVLKNRQFLIYHVRNHTGERPCKCSECGKSFSNPVVLSSHRATHRPRPGGHPCEQCHKVFANRTNLTIHRKRHHLGILPHKCDICGRGFSYACELRLHVKHSHDKVPWPKPKPEAKGTRNMSRQPVATHSVSVATTVTVQNWEYGPNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -