Basic Information

Insect: Tachystola acroxantha
Gene Symbol: -
Assembly: GCA_963506565.1
Location: OY735899.1:620918-634132[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 4.3e-05 0.0027 18.6 1.7 1 23 305 327 305 327 0.99

2 12 0.0017 0.11 13.5 3.2 1 23 334 356 334 356 0.98

3 12 1.3 81 4.5 1.3 1 23 360 382 360 382 0.95

4 12 2e-06 0.00013 22.7 2.3 1 23 387 410 387 410 0.97

5 12 0.095 6.1 8.0 0.0 2 23 414 436 413 436 0.89

6 12 0.0026 0.17 13.0 0.1 1 19 440 458 440 460 0.97

7 12 0.33 21 6.3 0.1 3 23 474 495 473 496 0.93

8 12 0.012 0.77 10.9 0.5 1 23 500 523 500 523 0.95

9 12 0.00021 0.014 16.4 0.4 1 23 567 589 567 589 0.98

10 12 1.3e-07 8.1e-06 26.5 0.9 1 23 595 617 595 617 0.99

11 12 0.083 5.4 8.2 3.6 1 23 623 646 623 646 0.95

12 12 8.2e-05 0.0053 17.7 3.7 1 23 652 675 652 675 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	4.3e-05	0.0027	18.6	1.7	1	23	305	327	305	327	0.99
2	12	0.0017	0.11	13.5	3.2	1	23	334	356	334	356	0.98
3	12	1.3	81	4.5	1.3	1	23	360	382	360	382	0.95
4	12	2e-06	0.00013	22.7	2.3	1	23	387	410	387	410	0.97
5	12	0.095	6.1	8.0	0.0	2	23	414	436	413	436	0.89
6	12	0.0026	0.17	13.0	0.1	1	19	440	458	440	460	0.97
7	12	0.33	21	6.3	0.1	3	23	474	495	473	496	0.93
8	12	0.012	0.77	10.9	0.5	1	23	500	523	500	523	0.95
9	12	0.00021	0.014	16.4	0.4	1	23	567	589	567	589	0.98
10	12	1.3e-07	8.1e-06	26.5	0.9	1	23	595	617	595	617	0.99
11	12	0.083	5.4	8.2	3.6	1	23	623	646	623	646	0.95
12	12	8.2e-05	0.0053	17.7	3.7	1	23	652	675	652	675	0.98

Sequence Information

Coding Sequence: ATGAGGACATTTACAGCCGTGAAAATAGAATCAGTGAATTGCGATGGTGACTTGGTGGATAGTGGTTCTGAGGAGTTACGGGCTTGTAGAGTATGTCTTGCTACCGAcataaaattattcaatttacACGTTTACCGACTGGCGCAGACGTTTGGGGACCTCACGGGGACTCCGGTGTCGGCTAGCGATGGGTTCCCCCAACACATATGCAGTGTGTGCGGCGCGCTGCTCTGCAAGTCAGCGCAGTTCCGCAACAAATGCAGGCAAACACACGTCTCGTTGCAAGATTCAAGAGTCAAGACACctattATAACCACAGACTACATTCGTACAATGGACCGCACAGACTCATTAATCTTGATCACAACAAACACATTAACACTGGATTCACTACAAAAAGCAGACGTTGAAGAAAGGAAGCAAAGAAAAAAACACAAAAACGAAGAGTTAGAAGTTAAAAAAGAGACGTTTTTTGAAATTCCACCAATAGACGACTATTCTAGTAATATTAATGATTTAGATGACAATTTCGATGATTTCTTAGAGAACATTGACGGTGGAGAAATAGTAGAAGCACATAGCATAAAAGTAGAAGACGAATTCTTAGCAGAACATTATTCTTTGCGaagtaaaaagaaaaagaaagattCTAACGCGAAAGTCAAAAAGAAAAAGGCTTTGAAACGAATTAGAAAAATCAAAACTGAGAATTCGGATACTGAATTAACAGATACAGAATTTAATAGTAAGATTAAAGAACCGAAGAGAAAGAGATTGTATAATAGAAAAACTGAAGAGGATTTTGTGAATTTCAGTAAAACATATAATGTAGAAGTTGTTTTTTTGACTAGAGAACAACAATTGCAGGAGATACAGTCTCGGAAAGAAGCTGATGATTATTTAAGTGCGAGATTTCAGTGCGAATTGTGTTATAAGAGTTTCATGAAAGAAAGCGCTTATAAGAAGCATATGGCGACCCATGATCCGAGCAATGGCAGCCACGTCTGTGACGTCTGCTCCGTCCGCTTCCCCGTCAGACACAAGCTCATGAAGCACCTCCGCAGACACAAGACTCACTTCATATGCAAGTTCTGCAACCAGATCAGCAAGGACAGTACGATGGCCAAGATGCACTTCAAGTGGCACGAGGGCTTCAAGTACGAGTGCACGCACTGCGGGAAGTCATTCAACAAGCCGAGCTCATACATGAACCACGTGCGCGAGCAACACAGCGCGAGCGTCTGCCCGGTGTGCGGCCAGGTGTGCGCCGGCACGCGCGCGCTCGCCGCGCATACAGCCGCCGCGCACGACGAGTCGTACAAGTGTCTGCAGTGCGGCCGCCCGTTCCACAGCGAGGCGGCGCTCATCCGGCACTCGGAGCTCGCCGGCGGACGCGCCTGCGACACCACCATGAGGGCCTGTCCCGAATGCGGCGACAACTTCCTCTCGGCCGACGCGCTCACCACTCACCTGGAGAACGACCACCACAACCAGATCTTCAGATGCGAACAGTGTAACACGACATATAGTAGCGACAGACAGCTCGGTATCCACTGGACCCGCGCCCACAAGGGGCAGAAACGGCGCGCCGGGGCAAGCGGGGCCAGCGGGGGGACAGACAGGCCACACGACGGGGACTTCATGTGCGAGGTCTGCGCTAAGAGCTACCCGGGGACAGACAGACCACACGACGGGGACTTCATGTGCGAGGTCTGCGCTAAGAGCTACCCGAGCGAGACGACCCTCCGGTATCACCAGCGCGTGCACACCGGCGAGCGGCCCTTCCAGTGCCCCATGTGCCCGAAGCGGTTCCGCATGAAGACCAACCTGCAGGTGCATATCAACACGCACACCGGCGCGCGCCCCTACAAGTGCAACCTGTGTCCAGACACGTTCAAGTCATACTCCCAGAAACACAAACACAGACTTCTgGTCCACACGAAGGAGCGTCGTCACAAGTGTCACATGTGTGAGAAGACCTACGTGGTCTCATTCGATCTCAAGATGCACATCCGCACGGTCCACATGAAGATCCCCCTGCCGCCGCGCAACCGGCGCCGCAACCGCGGCAGGCCAATGGACGTTGCCATGCCAACCTTGAATATACCAAGCAATATTATGCCGACAAATATATCTATACCTGttaatatacatatacctaattga
Protein Sequence: MRTFTAVKIESVNCDGDLVDSGSEELRACRVCLATDIKLFNLHVYRLAQTFGDLTGTPVSASDGFPQHICSVCGALLCKSAQFRNKCRQTHVSLQDSRVKTPIITTDYIRTMDRTDSLILITTNTLTLDSLQKADVEERKQRKKHKNEELEVKKETFFEIPPIDDYSSNINDLDDNFDDFLENIDGGEIVEAHSIKVEDEFLAEHYSLRSKKKKKDSNAKVKKKKALKRIRKIKTENSDTELTDTEFNSKIKEPKRKRLYNRKTEEDFVNFSKTYNVEVVFLTREQQLQEIQSRKEADDYLSARFQCELCYKSFMKESAYKKHMATHDPSNGSHVCDVCSVRFPVRHKLMKHLRRHKTHFICKFCNQISKDSTMAKMHFKWHEGFKYECTHCGKSFNKPSSYMNHVREQHSASVCPVCGQVCAGTRALAAHTAAAHDESYKCLQCGRPFHSEAALIRHSELAGGRACDTTMRACPECGDNFLSADALTTHLENDHHNQIFRCEQCNTTYSSDRQLGIHWTRAHKGQKRRAGASGASGGTDRPHDGDFMCEVCAKSYPGTDRPHDGDFMCEVCAKSYPSETTLRYHQRVHTGERPFQCPMCPKRFRMKTNLQVHINTHTGARPYKCNLCPDTFKSYSQKHKHRLLVHTKERRHKCHMCEKTYVVSFDLKMHIRTVHMKIPLPPRNRRRNRGRPMDVAMPTLNIPSNIMPTNISIPVNIHIPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -