Basic Information

Insect: Tachystola acroxantha
Gene Symbol: -
Assembly: GCA_963506565.1
Location: OY735898.1:2950875-2954464[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.006 0.39 11.8 0.7 1 23 80 102 80 102 0.98

2 16 0.45 29 5.9 0.1 2 23 130 152 129 152 0.90

3 16 0.58 37 5.6 0.3 2 23 173 195 172 195 0.94

4 16 0.0018 0.12 13.5 2.0 1 23 200 222 200 223 0.92

5 16 0.00013 0.0082 17.1 2.3 1 23 227 250 227 250 0.94

6 16 0.00087 0.056 14.5 2.3 3 23 254 275 252 275 0.96

7 16 4.2 2.7e+02 2.9 0.4 2 20 282 300 281 302 0.92

8 16 0.0082 0.52 11.4 2.4 1 23 351 374 351 374 0.94

9 16 0.19 12 7.1 0.2 2 23 402 424 401 424 0.94

10 16 0.003 0.2 12.7 0.5 1 23 446 469 446 469 0.96

11 16 7.6e-06 0.00049 20.9 1.0 2 23 475 496 474 497 0.93

12 16 0.0024 0.15 13.1 3.7 1 23 502 525 502 525 0.96

13 16 0.00014 0.0092 16.9 0.0 2 23 531 553 531 553 0.96

14 16 0.0086 0.56 11.3 7.0 1 23 557 580 557 580 0.97

15 16 0.013 0.86 10.7 0.8 2 23 587 608 586 608 0.96

16 16 0.014 0.89 10.7 2.3 1 23 614 636 614 636 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.006	0.39	11.8	0.7	1	23	80	102	80	102	0.98
2	16	0.45	29	5.9	0.1	2	23	130	152	129	152	0.90
3	16	0.58	37	5.6	0.3	2	23	173	195	172	195	0.94
4	16	0.0018	0.12	13.5	2.0	1	23	200	222	200	223	0.92
5	16	0.00013	0.0082	17.1	2.3	1	23	227	250	227	250	0.94
6	16	0.00087	0.056	14.5	2.3	3	23	254	275	252	275	0.96
7	16	4.2	2.7e+02	2.9	0.4	2	20	282	300	281	302	0.92
8	16	0.0082	0.52	11.4	2.4	1	23	351	374	351	374	0.94
9	16	0.19	12	7.1	0.2	2	23	402	424	401	424	0.94
10	16	0.003	0.2	12.7	0.5	1	23	446	469	446	469	0.96
11	16	7.6e-06	0.00049	20.9	1.0	2	23	475	496	474	497	0.93
12	16	0.0024	0.15	13.1	3.7	1	23	502	525	502	525	0.96
13	16	0.00014	0.0092	16.9	0.0	2	23	531	553	531	553	0.96
14	16	0.0086	0.56	11.3	7.0	1	23	557	580	557	580	0.97
15	16	0.013	0.86	10.7	0.8	2	23	587	608	586	608	0.96
16	16	0.014	0.89	10.7	2.3	1	23	614	636	614	636	0.96

Sequence Information

Coding Sequence: ATGGAAACGAAAACAGAAGTCGACATCGCTGAAAAGAAGACGCCGAGGAGAGCGAGCTTGTGGCAAATGCGTGAGAATATCGCAGGCTTTCTGAACATGTCTACTGCAATGCCTTTTAAAAGAACAAATTTCTTTTCAGATGATAATCCGGCCAAGGGTGCCAATAAGATCAGACGGAGAAACCTGCAAATATTATTCAACAACACTACGATGGTACCCTTTAAATGGCGAGGGAAATACATGTGCTTTTACTGTGGGGCCGATGTAGATAAATACGAGGATTTGAGAAAACATACAAAAAGTCACGGCTTATGTACCGATGGAGATCGGGCTATAAAATTGGTCAAATCATCCGACGCTGAAGTGAAACTCGACGTCTCAGACGTAACATGTGAACTGTGCAGTGAACCGTTTCCCAATTTCGATGAAATAGTATCTCATTTGATATTCAAACACAAACTTCCTTATAATAAAGACGTCGAGTTAATAATAACTGCGTATCGGCTAGTTGATCTTAAATGTTTACAGTGTGACGATAGTTTCGACTTTCTGGGTAAACTGATAATGCATGTTAACAATAACCATCCTAACAATTGTTTCCTGTGTGACAGTTGTGAGCAGAAGTTTAATAAGAAAAGGGACTTACAAGCTCATGTTAGAGCTCATCACAAAGACAAATACAACTGTGAGAAATGCCCTCTAAGTTTCACAACTCACTCTGCCCTTCAAAACCATAAAAGTAACTCGCATAGTTCCATTTGCAATTTCTGTTTTAAAACCTTCTCATCGGCTAGTAAAAGGCTGAAACATATGAACAAGGAACACAACTTTGATGGTCTGTTACAATGTGGGCTTTGTCTCAAGATTTTGCATACTAAACAGTCATTTTTGCGTCATGCAGCCAAATGTAATATGACACATGACGAGATCAAACCTGGTGCATGTAGTGATGAGAAGAACGCGAGAGCAAGTGTCAAACAGCTCAGGAGTAACATAGCTTGCATATTGAACATGTCTACCGCAATACCGTTCAAACATTACATGAACCGATTTCGATGTTTCTACTGCCCTAAAGACTTCACCGAATGCGAGGAAATGAGACAGCACACAGTAATGGAGCATCCTCTGTGTGATATTAAACTGAAATGCATGAAACTACGGAATAGGAAAGAAGAGTGCATCAAAATTGATACGTCGTCATTGTCGTGTAAAATGTGCTTCGAATCTATGTCCGATTTGAATACTTTAATAAATCATTTAATATCGGAGCACAAAGCTAGATATGACAAGTCTATTGCACACGTTTTTCAACCATTTAAATTGATTGAGAACAATTTCAACTGTCCGTATTGTGCGGAGGTGTACAACTACTTCAGTACGTTACTGAAACACGTTAGCAAAGACCATACGGATAATAGATTGATCTGTTTGTATTGCGGCAAGTCTTTTAGGACTGATCCGAACTTAAGAGCGCATATAACTCGTCACCACAAAGCTGCCAGATACAGGTGCAGTCATTGCGACAGCGAATTTACTTCAAGCAACGACTTGCATTTGCATTTGGGAACGAGACACGGTGTGAAGTTTGCTGTATGTCCTCAGTGTCCTGAGAAATTCACTTCCCAATACGCGGTTGCGAGGCATTTGATCACAGTTCACTCTACTGGACACAAATGCACGTTTTGTGATAAACTCTTTACTAGGCACTCGTTCATGATGAATCATGTTAGACGGTTGCATTTGAAGGAGAAAAACGTCGAATGCTCCGTTTGTTTCGAGAGATTCTTCGATTCTCAACGTCTAAAGATGCATATGGTGAAACATATAGGTGAAAGGAACTTTCATTGTGATATTTGCGGAAAGAAATTCCTTTGGAAAAAGAATCTAAGGGGGCACATGTCTTCTCATATAAAGCATACACCTTCTCATTtgcataattaa
Protein Sequence: METKTEVDIAEKKTPRRASLWQMRENIAGFLNMSTAMPFKRTNFFSDDNPAKGANKIRRRNLQILFNNTTMVPFKWRGKYMCFYCGADVDKYEDLRKHTKSHGLCTDGDRAIKLVKSSDAEVKLDVSDVTCELCSEPFPNFDEIVSHLIFKHKLPYNKDVELIITAYRLVDLKCLQCDDSFDFLGKLIMHVNNNHPNNCFLCDSCEQKFNKKRDLQAHVRAHHKDKYNCEKCPLSFTTHSALQNHKSNSHSSICNFCFKTFSSASKRLKHMNKEHNFDGLLQCGLCLKILHTKQSFLRHAAKCNMTHDEIKPGACSDEKNARASVKQLRSNIACILNMSTAIPFKHYMNRFRCFYCPKDFTECEEMRQHTVMEHPLCDIKLKCMKLRNRKEECIKIDTSSLSCKMCFESMSDLNTLINHLISEHKARYDKSIAHVFQPFKLIENNFNCPYCAEVYNYFSTLLKHVSKDHTDNRLICLYCGKSFRTDPNLRAHITRHHKAARYRCSHCDSEFTSSNDLHLHLGTRHGVKFAVCPQCPEKFTSQYAVARHLITVHSTGHKCTFCDKLFTRHSFMMNHVRRLHLKEKNVECSVCFERFFDSQRLKMHMVKHIGERNFHCDICGKKFLWKKNLRGHMSSHIKHTPSHLHN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00208139;
90% Identity: -
80% Identity: -