Basic Information

Insect: Tachystola acroxantha
Gene Symbol: Znf296
Assembly: GCA_963506565.1
Location: OY735870.1:13692566-13703365[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00086 0.055 14.5 0.2 2 20 182 200 181 204 0.91

2 11 0.071 4.5 8.4 2.9 1 23 243 265 243 265 0.97

3 11 0.013 0.84 10.8 0.3 2 20 361 379 360 381 0.92

4 11 0.00042 0.027 15.4 2.4 1 23 389 411 389 412 0.94

5 11 7.7e-05 0.005 17.8 3.0 1 23 439 461 439 461 0.99

6 11 4.2e-07 2.7e-05 24.9 2.8 1 23 468 490 468 490 0.98

7 11 4.5e-07 2.9e-05 24.8 1.7 3 23 503 523 501 523 0.96

8 11 3.3e-05 0.0021 18.9 3.2 1 23 529 551 529 551 0.99

9 11 2.9e-06 0.00019 22.3 2.6 2 23 558 579 557 579 0.96

10 11 1.7e-07 1.1e-05 26.2 1.5 1 23 585 607 585 607 0.99

11 11 0.0015 0.096 13.7 0.1 1 23 613 635 613 635 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00086	0.055	14.5	0.2	2	20	182	200	181	204	0.91
2	11	0.071	4.5	8.4	2.9	1	23	243	265	243	265	0.97
3	11	0.013	0.84	10.8	0.3	2	20	361	379	360	381	0.92
4	11	0.00042	0.027	15.4	2.4	1	23	389	411	389	412	0.94
5	11	7.7e-05	0.005	17.8	3.0	1	23	439	461	439	461	0.99
6	11	4.2e-07	2.7e-05	24.9	2.8	1	23	468	490	468	490	0.98
7	11	4.5e-07	2.9e-05	24.8	1.7	3	23	503	523	501	523	0.96
8	11	3.3e-05	0.0021	18.9	3.2	1	23	529	551	529	551	0.99
9	11	2.9e-06	0.00019	22.3	2.6	2	23	558	579	557	579	0.96
10	11	1.7e-07	1.1e-05	26.2	1.5	1	23	585	607	585	607	0.99
11	11	0.0015	0.096	13.7	0.1	1	23	613	635	613	635	0.98

Sequence Information

Coding Sequence: ATGGCTTCGTCTTTGAAGAATTGTGAAATAAAGATTGAAGAAGTGTGTCGAACGTGTTTGTCCAAAGAAATAGAATTGCATTCAGTGTTTAACTCGTGTCTAGGAACAATCACATTAGACTATATTGTTGGTGTAATTACGGGTGTGAAGATTGAAGAAGGAGATGGATTGCCATCAACAATATGCCGTGAGTGTAAGGAAAAAGCTGAAAAGGCATTCCAGTTCAAACAACGATCACAGGAGGCAGATAGTAAACTACGAGGCTTGTTTAAGAAAGAGAAGATTGACTATTCTGTCCTAGAAGTGCCTTTGTACCAGCCAATGGGAGTCAAAACCGAGCAATTTAACACTGATGATCATGATGACTTTATGGATACTGATTTCATTTGCAATGGCCCAGATGAAAGTAATGACACAGAGCCAGTGAAAAAGGAAGCCAACAATGAAACTAAAAGCCGTTACTTTGGCTTCGAGTCTACTGATAAGTCTcttgaaaaaaagaaaaaatgtattAAAGTTGAAATTGAAGATTCTGTTAGCACATATTGCCCTCTATGTGGTACGTCCTACGATGGTACAGATAATTTGACAAAACACATGTGGACTTATCATGCAGAACTGATGGGTCCAAAGAAGAGGGGACGACCAAAGAAATTAATGACTAGTTCAATATTAACAAAGTTGTCTGAAAACGGTTTCTACTTGAAGTCTGTTCCGGCCAAACGGTTCGATTGTGTTTTTTGTAAGTTGCAATGCAAAACCAAAGAAGACTTGGGAAGTCACATGTCGAAGCATAAGGATACAAAAGTTTTTTGCTGCATTTTATGCAAACAAATGTTTTTAAAGAAAAAGAATTTTGACCAGCATGGGTGCATGGCGAAGGGGGACAAGAATGATACACACTCGAAGAATAGGGACCTAAATTGTCTTACTGAAATTTTGTTGCACGAGCTGTTAGACCCAAATTGTGATttgGAGAACATGAACGTACTGCAAGTGTGTAGCATTTGCAGCGGCGTGTTCCTGTCGGAAGAGGATCTCGCCAACCATAACGACGCCGACCACCCGGAGCGTTCGCTGCGATGTACTCTGTGCACAAAAGCTTTCTCCACCGTGAAGTCTGCAACTCGTCACAGGAGCGTATGCAAACAAGTCGACAGGAAGCACATCTGTAACACTTGTGGTCTCAAATTTGCTTATGAAATATCACTCAACAAGCATATACTGCGACATCACGAGGGCCAGAGTGTTTCCGTGACATTCATGGACACCAAGCCGCCCAAACCGGAGCAGCCCGAGGCGGAGGAGACACAATTCCAGTGCGACACTTGTAGTAGATGTTTCCCCAAGAAAGTATCGCTTGCCAAGCATGCAAAGACACACATGCCCGTTGAGAAATTTTTTGAGTGCGACATCTGCAAGAAAAAGTTCTCCAGAAAAGATAATTTGAGGTCCCACAAGAAGATCCACGAGCCGAACCGCGAGAAGCCTCCCAACAACTGCCTGTGCCTGTACTGCGGCCGCGGCTTCTCCAACTCGTCCAACCTGATCGTACACATGCGCAGACACACCGGCGAGAAACCATACAAATGTGACTTCTGTGGGAAAGGCTTCCCGAGGTCATCGGATCTGCAGTGCCACAGGAGATCTCACACTGGAGAGAAACCATGCATATGCCGTGTTTGTGGAAAAGGGTTCTCGCGCAGCAACAAGCTGTCGCGGCACATGCGCGTGCACACCGGTCAGAAGCCGTACAAGTGCACGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCATATTCGCCGGCACACGGGCGACAAGCCGTACATCTGCGAGGTCTGCGGCGACCGCTTCATTCAGGGGACTGCATTGCAAAATCATCGGCGTGTGCACAGCCATTTCCCGCCACCCGCGCAGGCGCCGGCGACGCAGACGCAAGGGCATGCCATCGCCTACACAGTCCAGAGTATAACTCAAACGCATTGA
Protein Sequence: MASSLKNCEIKIEEVCRTCLSKEIELHSVFNSCLGTITLDYIVGVITGVKIEEGDGLPSTICRECKEKAEKAFQFKQRSQEADSKLRGLFKKEKIDYSVLEVPLYQPMGVKTEQFNTDDHDDFMDTDFICNGPDESNDTEPVKKEANNETKSRYFGFESTDKSLEKKKKCIKVEIEDSVSTYCPLCGTSYDGTDNLTKHMWTYHAELMGPKKRGRPKKLMTSSILTKLSENGFYLKSVPAKRFDCVFCKLQCKTKEDLGSHMSKHKDTKVFCCILCKQMFLKKKNFDQHGCMAKGDKNDTHSKNRDLNCLTEILLHELLDPNCDLENMNVLQVCSICSGVFLSEEDLANHNDADHPERSLRCTLCTKAFSTVKSATRHRSVCKQVDRKHICNTCGLKFAYEISLNKHILRHHEGQSVSVTFMDTKPPKPEQPEAEETQFQCDTCSRCFPKKVSLAKHAKTHMPVEKFFECDICKKKFSRKDNLRSHKKIHEPNREKPPNNCLCLYCGRGFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICRVCGKGFSRSNKLSRHMRVHTGQKPYKCTYCEKAFSQSNDLTLHIRRHTGDKPYICEVCGDRFIQGTALQNHRRVHSHFPPPAQAPATQTQGHAIAYTVQSITQTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01091014;
90% Identity: -
80% Identity: -