Basic Information

Insect: Tachystola acroxantha
Gene Symbol: -
Assembly: GCA_963506565.1
Location: OY735884.1:10092393-10094392[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 6.4e-07 4.1e-05 24.3 1.7 1 23 104 126 104 126 0.98

2 13 1.3e-06 8.4e-05 23.3 0.5 1 23 133 155 133 155 0.99

3 13 0.00036 0.023 15.7 3.6 1 23 161 183 161 183 0.97

4 13 2.1e-05 0.0014 19.5 0.5 1 23 189 211 189 211 0.99

5 13 2e-05 0.0013 19.6 1.1 1 23 245 267 245 267 0.97

6 13 5.3e-05 0.0034 18.3 1.5 1 23 276 298 276 298 0.98

7 13 1.5e-05 0.001 20.0 7.8 1 23 304 326 304 326 0.98

8 13 0.038 2.5 9.3 3.3 2 17 331 346 330 351 0.89

9 13 2.6e-06 0.00017 22.4 3.0 2 23 360 381 359 381 0.97

10 13 1e-06 6.7e-05 23.6 1.8 1 23 387 409 387 409 0.98

11 13 0.0052 0.33 12.0 3.2 1 23 415 437 415 437 0.97

12 13 0.0001 0.0067 17.4 2.5 1 23 443 465 443 465 0.98

13 13 0.4 25 6.1 6.5 2 23 472 494 471 494 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	6.4e-07	4.1e-05	24.3	1.7	1	23	104	126	104	126	0.98
2	13	1.3e-06	8.4e-05	23.3	0.5	1	23	133	155	133	155	0.99
3	13	0.00036	0.023	15.7	3.6	1	23	161	183	161	183	0.97
4	13	2.1e-05	0.0014	19.5	0.5	1	23	189	211	189	211	0.99
5	13	2e-05	0.0013	19.6	1.1	1	23	245	267	245	267	0.97
6	13	5.3e-05	0.0034	18.3	1.5	1	23	276	298	276	298	0.98
7	13	1.5e-05	0.001	20.0	7.8	1	23	304	326	304	326	0.98
8	13	0.038	2.5	9.3	3.3	2	17	331	346	330	351	0.89
9	13	2.6e-06	0.00017	22.4	3.0	2	23	360	381	359	381	0.97
10	13	1e-06	6.7e-05	23.6	1.8	1	23	387	409	387	409	0.98
11	13	0.0052	0.33	12.0	3.2	1	23	415	437	415	437	0.97
12	13	0.0001	0.0067	17.4	2.5	1	23	443	465	443	465	0.98
13	13	0.4	25	6.1	6.5	2	23	472	494	471	494	0.88

Sequence Information

Coding Sequence: atggCAGAAGGCTACATTGAGCAGATAATCATAAAAATAGAAGCACAAGATGACTTTGATGACGATGAAACGGAGAATGTGAAGCATGAATTAGAAACATCAAGCAGCAAGTATGACTTTGATATTAAGGTCAAACAGGAACCTGAGGAAACAGATCCACTACCATCAATGCCGTTTAAACTGGAAGGTGAAAATGGTTACCAGGAACCCAACGAAGGAGGAATGGAAGTAAAATTGGATCCGGAGGATGTTAAGTTGATCTCATGTGATGACTCATCTCTAACCAAGTACACCGACTCAAAAAAGGCATACTCGTGCGACACCTGCGACAAAAGTTTCACCCGAAAGTATGCTCTAGACCGACACTTAAAACTCCATCTGGTTAAACCGAAACGGTACGAGTGTGACATTTGCAACAAACGCTTGAGAGACAAAGCTAAACTAGAATCTCATATACGTACTCATACAGGGGAAAAACCTTTCCAATGCGACATCTGCAAGAAAAGGTTCTGCGACAAATTCGTACTTGTCAACCATCAGTTTATTCACTCGGAAAATAATCCTTACACCTGTGATATTTGCAAGAGAGGATTTTCTAGCAAAGCTAGTTGGAAAGGCCACCAAAAGGTGCATACTAAAGAAAAGCCGTTTATATGCATTACGTGCCACAAAGGCTTTACTTGCGGCTTCACTCTAAAAGCGCACCAAGTTATTCACACTGGAGAAAGGCCGTTCTCTTGTCCCATTTGCAAGAAACTGTTCAGATACAAGGGAACGCTTGCTAAGCATCAGTATGTTCACAACAAAAACAAACCGCCACCAACGCACGAGTGTGAAGTGTGCAATAAGAAATATGTTGACCGTACCAAACTAAACGGTCACATGCTCACTCATACCGGGGAGCGACCGTTTTCGTGTACTCATTGTGATAAACACTTCACGCAAAAGTATTACTTAAAGCTTCATTTGCGCCTTCACACCGGGGAAATTTCGTGTAAATACTGCAAGAAGTCTTGTAGGGATAATACTCATTTAAGGTTTCACGAGGAACGTTGTCCGGACGGCCAGGATGCGTTGACTTGTGAAGTGTGTAGTAAAAAATTTCGGCGGCACTCGAATCTTGTGTCTCATCAGCGGATCCATGGGTTAGATAAACCCTTTACGTGCGACATTTGTGATAAACGGTTCGTTAATGAGACGCACTTAAGGTCGCATTTGCAAGTGCATGTCTCCGATAGGCCGTTCTCGTGTGACATTTGTCAGAAGCAGTTCCGGGAAGAGAACCATTTGAGGTTTCACCAGCGAGCTCATAGTTCGGAGAAGCCTTTTCAGTGCGGTGTTTGTAAGAAACAATTCAGAGAGGAGAACCATCTTAGATCTCATGAAAGAGTGCATGATCCGGAGAAGACTGTGCCGTGTGATATTTGTTTTAAACGGTTCAAGTCGCACAGACATGTTAAATCTCATTGCCAACGTGTGCATGCTACTCTGAAATTGAGCATTTAA
Protein Sequence: MAEGYIEQIIIKIEAQDDFDDDETENVKHELETSSSKYDFDIKVKQEPEETDPLPSMPFKLEGENGYQEPNEGGMEVKLDPEDVKLISCDDSSLTKYTDSKKAYSCDTCDKSFTRKYALDRHLKLHLVKPKRYECDICNKRLRDKAKLESHIRTHTGEKPFQCDICKKRFCDKFVLVNHQFIHSENNPYTCDICKRGFSSKASWKGHQKVHTKEKPFICITCHKGFTCGFTLKAHQVIHTGERPFSCPICKKLFRYKGTLAKHQYVHNKNKPPPTHECEVCNKKYVDRTKLNGHMLTHTGERPFSCTHCDKHFTQKYYLKLHLRLHTGEISCKYCKKSCRDNTHLRFHEERCPDGQDALTCEVCSKKFRRHSNLVSHQRIHGLDKPFTCDICDKRFVNETHLRSHLQVHVSDRPFSCDICQKQFREENHLRFHQRAHSSEKPFQCGVCKKQFREENHLRSHERVHDPEKTVPCDICFKRFKSHRHVKSHCQRVHATLKLSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -