Basic Information

Insect: Tachystola acroxantha
Gene Symbol: -
Assembly: GCA_963506565.1
Location: OY735899.1:269260-271305[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.6e-06 0.0003 21.6 0.6 2 23 71 93 70 93 0.94

2 15 0.00073 0.047 14.7 1.9 2 23 101 123 100 123 0.96

3 15 0.17 11 7.3 0.7 2 23 130 152 129 152 0.86

4 15 9.5e-08 6.1e-06 26.9 1.3 2 23 160 182 159 182 0.96

5 15 0.00021 0.013 16.4 0.6 2 23 190 212 189 212 0.95

6 15 0.0028 0.18 12.9 2.7 1 23 219 242 219 242 0.97

7 15 0.00015 0.0098 16.8 0.7 3 23 249 270 248 270 0.96

8 15 0.00013 0.0083 17.1 2.8 2 23 286 308 285 308 0.95

9 15 0.00035 0.022 15.7 2.1 2 23 316 338 316 338 0.96

10 15 6.8e-07 4.4e-05 24.2 1.0 3 23 345 366 344 366 0.97

11 15 0.00089 0.057 14.4 4.3 2 23 374 396 373 396 0.97

12 15 0.00012 0.0079 17.1 4.2 2 23 403 424 402 424 0.96

13 15 5e-05 0.0032 18.4 3.4 1 23 430 453 430 453 0.97

14 15 6.9e-05 0.0045 17.9 0.4 2 23 462 483 462 484 0.95

15 15 0.082 5.3 8.2 0.7 2 21 645 664 644 665 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.6e-06	0.0003	21.6	0.6	2	23	71	93	70	93	0.94
2	15	0.00073	0.047	14.7	1.9	2	23	101	123	100	123	0.96
3	15	0.17	11	7.3	0.7	2	23	130	152	129	152	0.86
4	15	9.5e-08	6.1e-06	26.9	1.3	2	23	160	182	159	182	0.96
5	15	0.00021	0.013	16.4	0.6	2	23	190	212	189	212	0.95
6	15	0.0028	0.18	12.9	2.7	1	23	219	242	219	242	0.97
7	15	0.00015	0.0098	16.8	0.7	3	23	249	270	248	270	0.96
8	15	0.00013	0.0083	17.1	2.8	2	23	286	308	285	308	0.95
9	15	0.00035	0.022	15.7	2.1	2	23	316	338	316	338	0.96
10	15	6.8e-07	4.4e-05	24.2	1.0	3	23	345	366	344	366	0.97
11	15	0.00089	0.057	14.4	4.3	2	23	374	396	373	396	0.97
12	15	0.00012	0.0079	17.1	4.2	2	23	403	424	402	424	0.96
13	15	5e-05	0.0032	18.4	3.4	1	23	430	453	430	453	0.97
14	15	6.9e-05	0.0045	17.9	0.4	2	23	462	483	462	484	0.95
15	15	0.082	5.3	8.2	0.7	2	21	645	664	644	665	0.92

Sequence Information

Coding Sequence: ATGGACCAAGAAGTCGAACAAGTGTACGTAAAGCCAGACTTACTGACAATGAATTTTGAAATCAAGGTTGAGAAAGAAGAGAATACTCACCAGGACCCGGAGTATGTCTTCAACATAAAACAGGAGACCAGCCAAGACTACTACGATGTCAGTCAATCCTCAAAGGAAATCATCGGAAGGGTTTACGAGAACGGCAAGATAAACAGAGTCCAATGTCCTGAATGCGATAGCACGTTTAAAAACAGAGCGAATCTACAGAAACATTTGAAATTTGTACATGCAACTGAGGAGGATATAGTTGAATGTACACAATGTTATCGAACGTTCAAATCTATAGCTCATCTACGGTCCCATACTAACTCTGTTCACGCTATCGAAAAAGAGGTTTCTTGTGACGTATGTAACAAGACCTTTCTTAACAAGAAACGGCTGGACAATCACGTTTTTTATGCTCATCCTAAACCAGAGAATAGTGTAACTTGTACGATATGTCAAAAAACGTTTAAACAACAGTACAACTTAAAAATTCACATGAGACAAGTGCACCCGTCTGAAGATTGTTCCGTTAGATGTGAACAATGTAATAAGGCATTCAAAAACGATATGTTGCTGCAACGGCATGTGAAATGGAGTCACCCAAACGACGGTTTAATATACAAATGTCAGGAATGCAAGAAAACTTTACCGTCCATCGCTTGCTATAAGAAACATATGCAGAACGTCCATTCAAACACTGATGTCGCATGCGAAATATGTTTAAAAGTGTTTAAAACTAACAAAACTTTGCTTAGACATGTTAAAAATCTTCACGGGGACAAGAAAATAGAACCAAAGCAATACAAAGCAGGCGATTTGAAATGCTCGGAGTGTGATAAACAATTTTGTAATCAAACCTCTTTGTTATGGCATTATGAACGTAACCATTCAGAGAATAAGCGTAGCAACTACTGTCATTACTGTAAAAAAGAACTTTCTGATTATGCAAGCTTGAAACGGCATCTAGAAACTTCTCATTCATCTGAAACCGCTGCTTGTAATATATGCCACAAGATTTTTAAGTCTCCTATTAATCTTCAGAGGCATATCCGAGTAACCCACGCTCCACCAGAAGCTTCCCAAACATGTGATATCTGCAATAAGTCTTTTAAATGCTCGATGCACCTACGAATACATATCAACACAGTTCACCCTAAAGACGGCACGTGTACATgtgatatttgtaataaatcCTTCGCTTCAAAGAAATACATGTTAAAACATAGAAAAATACATGTCTCTAGCAAAGAATTCCCGTGTCACTTATGTCAGAAGATGTACAAATCTCAAAATGATGTCAAAAAACATATGAAACGGGTGCACGATATACttttgtataatattaatagGTGTGCTATTTGTGATGCTGTGTTTTCAAGTCCGTATACGTTAGAAACTCATTGGAATAAACATCACGGGAAAGATGCTAATGAAACCGAAGAGTCTAATACGACTGGTCATCCTAAATCAAGAGATTTGACTCCAATTGGACATTTAAATACTAAAGATTTATATACAACTGCAGATTCGAGTGCAAGTAGAGATTCCAATACAATCGGAGATACTAAAACAGGAGCAAGAGATTTGTATCAAACTGGACATTTAAATACTAAAGATTTATATACGGCTGGAGATTCGAATGAAAGTGCAGATTCCAATACAATCGGAGATCCTAAAACAATTGAAGAGAACGCAAAAGATTGGAGTTTAGGTGGAGTTTTGTATCAAACTGGACATTTAAATACTAAAGATTTAAATACAGCTGGAGGTTCGAATGATAACGAAGATTATGAGACCAAAGATTCTAAAATACTTGGAGATACAATAGGAGATTTGAACACGGGTGGAGATTTTTATTCAGCGGGCTATttcaaagaatatttaaatacacCCAAGACTTGTACTAAATGTGGTTTAACGTTTTTCAAAGATGTCGAACTCCATTTgcatattttgaaatgtggaaGCGCGACAGATATAGAAATTAAAATAGAGCTTGAAGAGCAATAA
Protein Sequence: MDQEVEQVYVKPDLLTMNFEIKVEKEENTHQDPEYVFNIKQETSQDYYDVSQSSKEIIGRVYENGKINRVQCPECDSTFKNRANLQKHLKFVHATEEDIVECTQCYRTFKSIAHLRSHTNSVHAIEKEVSCDVCNKTFLNKKRLDNHVFYAHPKPENSVTCTICQKTFKQQYNLKIHMRQVHPSEDCSVRCEQCNKAFKNDMLLQRHVKWSHPNDGLIYKCQECKKTLPSIACYKKHMQNVHSNTDVACEICLKVFKTNKTLLRHVKNLHGDKKIEPKQYKAGDLKCSECDKQFCNQTSLLWHYERNHSENKRSNYCHYCKKELSDYASLKRHLETSHSSETAACNICHKIFKSPINLQRHIRVTHAPPEASQTCDICNKSFKCSMHLRIHINTVHPKDGTCTCDICNKSFASKKYMLKHRKIHVSSKEFPCHLCQKMYKSQNDVKKHMKRVHDILLYNINRCAICDAVFSSPYTLETHWNKHHGKDANETEESNTTGHPKSRDLTPIGHLNTKDLYTTADSSASRDSNTIGDTKTGARDLYQTGHLNTKDLYTAGDSNESADSNTIGDPKTIEENAKDWSLGGVLYQTGHLNTKDLNTAGGSNDNEDYETKDSKILGDTIGDLNTGGDFYSAGYFKEYLNTPKTCTKCGLTFFKDVELHLHILKCGSATDIEIKIELEEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -