Tacr020012.1
Basic Information
- Insect
- Tachystola acroxantha
- Gene Symbol
- clz9
- Assembly
- GCA_963506565.1
- Location
- OY735892.1:7238490-7242659[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-09 1.5e-06 28.3 0.0 1 39 14 52 14 57 0.93 2 2 1.1 6.6e+02 0.7 0.2 2 11 528 537 527 538 0.91
Sequence Information
- Coding Sequence
- ATGGTTCGTAATTACAAAAGACAGCgagataaaaaatattcaaacgAAAACCTTTTACAAGCTGTAGAGGctgtaaaaactaaaaaaatgaaCAGTTACAAAGCGTCAGAAGTGTTTGGTATTCCCCGGTCAACCATTGTAGCACATATAACAGGCACTCGTGGCCAAAAGATGCCAAAACCTGGAAAACCTACCGTATTTTCTAAGCAACAAGAAGAACATCTCGCTTGTTTGCTGCACGTGATTGAAAAGGCTGGCCATCCTTTAACAAGAAAAGAACTAAAAACTTTGATTGCGGAATATGTGCGAAGAAATGGTATTGTTACCCCATTCAAGAACGATATTCCTGGGGATGACTGGTGTCATGGTTTTATGAAAAGAAATAAATTGTCAATGAAAAAGCCACAAGGCGTTGAGGTCGCTAGGAAAAAAGCGTGTAACCCATTTACAATATATCATTACTTTGACCTATTGGAATCAGCTGTGCAGGATTTAAATTTACATGGGAAACCAGAAAGGATATTTAACATCGATGAAACGAGTTTTTGTAATGACCCGACATCGGGTAAAATAGTCGGTCAGAAAGGCTACCCTTCAACAAGGACGACAAGCGGCCCTGGTCGAGATAACACTACGGTGCTTCTGGGTGCAAACGCACGAGGTGATAAAATACCGCCTTTAATTGTCTTCAAAGGCAAAAGTCTTTGGAACGAATGGTTTTATAAGAACGAAAATGTACAAACGGCATATTCGGTTAGTAAAAATGGATGGATGGAGACGTccatttttgaaaaatatatcaaaGATGTATTCTTACCATCCATTGGAAGTGAAAGGCCGGTGCTTCTTGTATATGATGGGCATAAAACCCACGTTGACCTGGGAGTCATTGAGTTGGCAGTTGCTAACAATGTCACAATTTTGAAGTTACCGCCTCATTCTTCACATGTGCTGCAGCCGTTAGATGTAAGTGCCATGAAGCCCATGAAAGTTCACTGGGAAGATGCTCTTATAAAATGGCAGCGACTACACTCTGGTGCTAAACTGCCCAAAAGTGAATTTGCAAGACTACTTACTGAAACTTGGGACAACCTGAATCCTGTAATTCTCCAAAACGGATTTATCAGATCAGGACTTTATCCTGTAGATAGAAATGCAGTTTCAAAAGAAAATTTTGACATCATATCTTGGTCAAAATGGGAACAATCCCTAAAAGATAATAAAAGATCGGAAGAAAACACTGAAGAAGATTTGCATAGTGAAAAAAGAAAACCTACAGACAGTGATTTAGAGACAGTACCACAGGCACAGCTTCCTTTGAATGACAATCCCAATTCTTATTCTAATGAGGTGCCATCACTGAAAACGCTGGTGTTGAATCATATAAATGATGAACAGAACTGtaatattttgaagaaaatccCATTTGAAAAGACCGAATATGGCATAAAGACAGTGACCGACAAGAACACCACAAAATATCGCACTGTGCTGCTGAAGATGTGCCCAGTGGTCATCACCGGATCAGGAGGGGCAATGCAGAATTACGCACTACTGAATAGGGCTCAACAATCCTTCATAGAAGAAGACTTGGCACGAGCTATACATGCGAGCGGCTCGACGAAGCCTCTACGTAGATGTGGAGTGAATGCGACTCAGCAAAATGATGACAGTCGCCAAGTGAAGATGTAG
- Protein Sequence
- MVRNYKRQRDKKYSNENLLQAVEAVKTKKMNSYKASEVFGIPRSTIVAHITGTRGQKMPKPGKPTVFSKQQEEHLACLLHVIEKAGHPLTRKELKTLIAEYVRRNGIVTPFKNDIPGDDWCHGFMKRNKLSMKKPQGVEVARKKACNPFTIYHYFDLLESAVQDLNLHGKPERIFNIDETSFCNDPTSGKIVGQKGYPSTRTTSGPGRDNTTVLLGANARGDKIPPLIVFKGKSLWNEWFYKNENVQTAYSVSKNGWMETSIFEKYIKDVFLPSIGSERPVLLVYDGHKTHVDLGVIELAVANNVTILKLPPHSSHVLQPLDVSAMKPMKVHWEDALIKWQRLHSGAKLPKSEFARLLTETWDNLNPVILQNGFIRSGLYPVDRNAVSKENFDIISWSKWEQSLKDNKRSEENTEEDLHSEKRKPTDSDLETVPQAQLPLNDNPNSYSNEVPSLKTLVLNHINDEQNCNILKKIPFEKTEYGIKTVTDKNTTKYRTVLLKMCPVVITGSGGAMQNYALLNRAQQSFIEEDLARAIHASGSTKPLRRCGVNATQQNDDSRQVKM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01401225;
- 90% Identity
- iTF_01401225;
- 80% Identity
- -