Tacr018035.1
Basic Information
- Insect
- Tachystola acroxantha
- Gene Symbol
- -
- Assembly
- GCA_963506565.1
- Location
- OY735889.1:10008272-10008751[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-10 1.7e-07 31.4 0.0 2 36 16 50 15 56 0.94 2 2 7.7 4.6e+03 -2.0 0.0 24 33 90 99 90 103 0.76
Sequence Information
- Coding Sequence
- ATGCCACGCGATTACAAGAGAAAATCTAATCGACAGACATGGAGCCACGAATGTATGCAAAAAGCTATTGAAACTGTTCAGAATAAAAAAATGGGATGGCAGTTAGCTTCAAAAACTTTTGGAGTTCCCCAGGCAACGCTCAGAAGACATGCATTAAACATGAATAAAACTTTAGCACCCAACACCAAAGGCTTAGGACGGTTTAAGCCAACGTTTCCTCCTGATATCGAGAGACAATTAGTTAAGCACTTGAAATTTTTAGAAACTCGACTTTTCGGTTTGTCTAGAACATCAGTCCAAGAGCTCGCGTTTGAGTTTGCAGAAAGGAATGGATTTGCTCATTGCTTTAATAAAGAAACAAAGCGTGCTGGACCAGAGTGGTTAGAAGGCTTTCTGAACAGAAACAAGGACATTTCTCTACGCACTCCTGAGCCTACTTCCGCAGCTAGAGCTCAAGCATTTAACAAACCGCAGGTTTAa
- Protein Sequence
- MPRDYKRKSNRQTWSHECMQKAIETVQNKKMGWQLASKTFGVPQATLRRHALNMNKTLAPNTKGLGRFKPTFPPDIERQLVKHLKFLETRLFGLSRTSVQELAFEFAERNGFAHCFNKETKRAGPEWLEGFLNRNKDISLRTPEPTSAARAQAFNKPQV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -