Tacr018007.1
Basic Information
- Insect
- Tachystola acroxantha
- Gene Symbol
- -
- Assembly
- GCA_963506565.1
- Location
- OY735889.1:9726679-9734361[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-07 0.00023 21.4 0.0 4 40 16 53 15 58 0.88 2 2 1.1e-05 0.0068 16.6 0.0 4 41 457 494 454 498 0.90
Sequence Information
- Coding Sequence
- atGGCGAAATACAAACGTAAAAAAGAAACGAAATATTCTTTAGCTGATTTAATAGAAGCAGTTGAAAATGTACGGCAAAAAAGAATGAATAGCTACGAAGCATCCATTAAATACGAAATCCCCAGGTCAACTATTATTCACCGCTTTTACGGTACACGCGGAGCCAAACAGCCAACGCCTGGCAGACCACTTGAACTTTCGAAAGAATGGGAAACTAAAGTAGCTTCCTATCTCCACGAGATGGAAAAATGTGGGTATCCATTGACACCTAAAGAAGTAAAACTTTTAATTTCTGATTACATTCGAAGGAACGGAATTATCACACGCTTTAAAGATGACTATCCGGGGAAGGAATGGTTCAGGGGATTTAAAAGACGACACAAATTAAGTTTGAAAAAGCCACAGGCTGTGGAAGTGGCTCGAAAACAAGCCTGTAATCCTTTTACagtttacaattattttggATTATTAGAACAAGCAACGCAAGAGCTGGGACTGATTGAGAAACCACATCTTATATATAATTTGGACGAAACCAGTTTTTGTAGTGACCCGATTAAAACTAAAGTTGTGGGTCGGATGGGGTTCCCCTCCATTAGAACGACTGGCGCCCCCGGGAGAAATAACACCAGTGTGCTCTTTGCTACGAATGCGCTCGGTAAAAAGATACCCCCCTTGATAATATTCCAGGGAAAACACCTATGGACCGAGTGGTTCTATAAAAACGAAGACATTAATACCGCGTACGCTGTAAGTCGTAAAGGGTGGATGGAGACCACCATCTTCGAAAAATTTATCAAAGATGTTTTCCTGCCAGCTGTCGGCGCAGAAAGACCGATCTTATTAGTCTATGATGGTCATTCGACACATGTAGAACTGAGTGTCATAGAGCTTCTAAAGGCCAACCAAATAACTGTTCTTAAACTGCCTGCTCACTCATCTCATATACTGCAGCCATTAGACTGCAGCACGATGAAACCTATGAAGGACAAGTGGGACAGCGAACTGGTGAAATGGCAAAGACTCCACATGGGAGCAAAACTCCCAAAACCAGAATTTGCGAAGATCATAACTATGTTATGGGATAATTTAAACCCAGTTATCATTGAAAATGGCTTCAggaaaacagGAGCAGCACCCATAGACAGACAAGCAAAAAAGAAATTAGTTGCAATTACCCGCCAGGACGGGAGTGGTGGGTTCGAGATCGGCGCGTGCCGGCAGACGCAACCGATCGCCTTTCACGAAGTGCATCGTCCGCCGTCTCCGCAACCGCTAGTGCAGTTGTCCGGCACCGGGCTGTGTTTTAATGGAACAATGGCAGAAGACACGACGCATCGACAGAAGTATAGGACTTATGATGCGGCTTCTCTTAAAAGGGCCTTTGAGATGGTTCAGAATGAAGGTAAAACAATATACATGGCTGCTAAACATAATGGAATTCCTTGGAGTACCCTGAAACGGTATGTCGAAAATGAAGAAGAAACGATCCGAAAAATGGGTAGACCTTTTGCCCTGTCGATTGAGTTGGAATTGAAGctattcaattatattatacaaatgcAAGAGATTAGGTTTGGGCTGACAGTTTTACAAGTAAGGAAGACTGCTTATATGCTAGCAAAGGCAGAAGGACGTGAAAATTTCTTGCCTTCTAAAAAAGAAATTGCAAGTCCCTGGTGGTGGAATAACTATAAGGCGAGGTATGGACTATCTCTTCGGGTTCCAGAGAATTTATCAGCATACAGAGCTTCAATGGCCAATGCCCAGATGGTTGGAGACTTTTTTATAAAACTAGATAATTTGGTCACTACGCTGAACATAAAAGACAAAGCGGATTTAATCTGGAATTGCGATGAAACTGGTATGTCGTACGTTGTGAAACCAAGCAGAGTTGTAACAGCTATcggcaaaaaatatatttacagaagAACATACGCTGAACGTGGGCAAACTCAAACTCTTTTAGCATGCGTATGCGCCAACGGCACGTGGATTCCACCAATGGTAATATTCAAGGGCGTAAGGTGGAATGACTTACTTACTACAGATGCACTACCAAATTCTATGGTCAGACTTTCACCTAAGGGCTGGATTAATTCCGAACTCTTCTTAGAATGGTTGGAGTTTTTCATCGCAGCCATACCACCGCAGCGTCCTGTCGTACTTCTAATGGATTCGCACGCGGCACACATTGGACCAGCAGTTCTTGAAACAGCTAAATCGAACCTTTACTTGTTCGTTTTTCCAGCCCATTGCACACATATTTTGCAGCCGCTCGATGTTGGCATCTTTAAGTCATTGAAAAATCACTGGCGGGAGAGCATGACTGCCTACATGAACAACAATCCATCAATTCCTCCTAACCGATcaaattttcattcaattttgaaTCCTGCCTTCGTAAAAGCTGTTACTGCAAGGAATACTataaatgcatttaaaaagacggGAATTTGTCCATTGGATGCAAGCGCAATCTCTGAAGAGGCGCTAAGACCATCAGCTCTTACCGATCAACCTATGACAAACAATTTAGGTGAAAATTCTGATGCTCCTATCACAGATTCAGTAACAAGTCCGGAGGTGCGAGTTCAGGAAATTCTAAAGACACCCAAAGCTACTCGCAAAGCTATCTCTAATACTAGAGCAAAAAAAGATTCGAGCGCGAAATGCTTGACACCCGTAGAAGACCCACTATCGCCTGCAACATCCAGGCAAGTGCTGTCACCCTTACCTACAACACCGAAAGGAGTGATACCAAAAATGGGGAATAAGGGAGACTCAAGCGCAAAATGCATGACACCCCAAGATGAAGACCCATCAATGCCAGGAACATCAAGGCCAGCAATGTCACCCTTACCTTCGAaaggtaaaaagaaaaaaaacatcgaaAGAAGTGATCACTACAAAGAAAAACTCCAAACAAGATGA
- Protein Sequence
- MAKYKRKKETKYSLADLIEAVENVRQKRMNSYEASIKYEIPRSTIIHRFYGTRGAKQPTPGRPLELSKEWETKVASYLHEMEKCGYPLTPKEVKLLISDYIRRNGIITRFKDDYPGKEWFRGFKRRHKLSLKKPQAVEVARKQACNPFTVYNYFGLLEQATQELGLIEKPHLIYNLDETSFCSDPIKTKVVGRMGFPSIRTTGAPGRNNTSVLFATNALGKKIPPLIIFQGKHLWTEWFYKNEDINTAYAVSRKGWMETTIFEKFIKDVFLPAVGAERPILLVYDGHSTHVELSVIELLKANQITVLKLPAHSSHILQPLDCSTMKPMKDKWDSELVKWQRLHMGAKLPKPEFAKIITMLWDNLNPVIIENGFRKTGAAPIDRQAKKKLVAITRQDGSGGFEIGACRQTQPIAFHEVHRPPSPQPLVQLSGTGLCFNGTMAEDTTHRQKYRTYDAASLKRAFEMVQNEGKTIYMAAKHNGIPWSTLKRYVENEEETIRKMGRPFALSIELELKLFNYIIQMQEIRFGLTVLQVRKTAYMLAKAEGRENFLPSKKEIASPWWWNNYKARYGLSLRVPENLSAYRASMANAQMVGDFFIKLDNLVTTLNIKDKADLIWNCDETGMSYVVKPSRVVTAIGKKYIYRRTYAERGQTQTLLACVCANGTWIPPMVIFKGVRWNDLLTTDALPNSMVRLSPKGWINSELFLEWLEFFIAAIPPQRPVVLLMDSHAAHIGPAVLETAKSNLYLFVFPAHCTHILQPLDVGIFKSLKNHWRESMTAYMNNNPSIPPNRSNFHSILNPAFVKAVTARNTINAFKKTGICPLDASAISEEALRPSALTDQPMTNNLGENSDAPITDSVTSPEVRVQEILKTPKATRKAISNTRAKKDSSAKCLTPVEDPLSPATSRQVLSPLPTTPKGVIPKMGNKGDSSAKCMTPQDEDPSMPGTSRPAMSPLPSKGKKKKNIERSDHYKEKLQTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -