Tacr011774.2
Basic Information
- Insect
- Tachystola acroxantha
- Gene Symbol
- -
- Assembly
- GCA_963506565.1
- Location
- OY735882.1:563681-570443[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-10 9.1e-08 32.2 0.0 4 39 180 216 177 220 0.90 2 4 3.5e-11 2.1e-08 34.3 0.2 2 39 232 269 231 272 0.92 3 4 3.1e-14 1.9e-11 44.0 0.0 4 45 289 331 286 331 0.96 4 4 2.2e-18 1.3e-15 57.3 0.0 1 43 338 381 338 382 0.96
Sequence Information
- Coding Sequence
- ATGCCCGGCCACGGGTTAGTTCAAATAAAATGCGAACCGTCATCAGAAGAAGAAGACAGCAACTCCCAGTTTCCTCACAGCTACTTCAATAGTcagCTAATTACATCGGAGCTCCGTCCTGTTAAATTAGAACCTGAATGTCGAAACGAAGACAATGCTTCCGTTCACCTTTTGCACCATTTACAGGGTGCCAGCAGTCTGGAGGAGTTGTCTCCGCTGGCGCCCGCGGGCCCGGCCGCCACGCCGGTGTGCGTCAAGCAGGAGCCAAGCGAGCCAGCGGCCGCACACGCCACGCTAGAGACACTCGAGTCAACACCACATAACAACATATCGGGCTCCACGTTGATCGATCGTCACCTGTCGCTGCTGCATGCCAGCGCCGCTGCCGACTCCGCCGACTTCATGCCACTCCTAGCCGTCAAGGACGAGCCGCTATCTGAAGGAGAGCAGCACACGCCTAGCGGCGACGACACGAGCGACTCTTCCCCGCCGCCCGAGCCCGCCGCCCGTGGGAGCCCCAAGAGCTGGTCGCAGAAGGACATGGACAGCGCGCTCGAGGCGCTCAGGAAACACCACATGAGCCTCACTAAGGCGTCAGCGACGTACGGGATCCCGTCGACCACGCTGTGGCAGCGCGCGCACCGCCTGGGCATCGACACGCCCAAGAAGGAGGGCGCGGCCAAGTCGTGGGGCGAGGCGGACCTCAGGCACGCGCTGCACGCGCTACGGGCCGGCGCTATATCAGCTAATAAGGCCAGCAAGGCGTATGGCATCCCTAGCAGTACGCTGTACAAGATCGCACGTCGCGAGGGCATCCGCCTGGCCGCACCGTTCAACGCCGCGCCCACCGCCTGGCGCCGCTCCGACCTGGAGCGCGCGCTGGCCGCCATCCGCTGCGGCGCCAGCTCCGTGCAGCGCGCGGCGTCGCAGTTCGGGATACCCACGGGTACCCTGTATGGAAGGTGCAAACGAGAAGGCATCGAACTGTCTCGCTCCAACCCTACACCATGGTCTGAAGACGCAATGGGGGAAGCGCTTGAAGCTGTCAGGGTTGGTCAGATGTCCATCAACCAGGCGGCTATCCACTACAATCTGCCATACTCCTCGCTTTACGGACGATTCAAGCGGTGTCGCTATCAAGTGCAGGGTCATCAACAAATGTCGCAGGAAATCCAAAAGCCCCATGAATTAGAACATCAACACGGCCAAGATCTAACCCAGTACTATCACCAATCCGTCCCAACTCACACCATTCATCATATGCCTGATGACCATATGCACGAGAACCATACTATGCACGAAGACCACAGGGATATACATAAAGACCTCaggagcatgcatgaagagcaCAGGCATATGAATGAAGACCACCGAACTATGCACCAAGATCATAGGAATATCCTTGGAGACTATACTGTACATGAAAACCACAGACCTATACATGAAGATCACAGGTCTATACACGAAGACCATATTATAACTCAGCACCCGTATATTAATCAGCAGTTAGAACAGCATCAGGGTATGCACATGGTTCAGGACTCATATACCGGTCACAACGGGCCGCCTGTGTACTATGCACAGAGCTGCCATCTAACAAGTTGA
- Protein Sequence
- MPGHGLVQIKCEPSSEEEDSNSQFPHSYFNSQLITSELRPVKLEPECRNEDNASVHLLHHLQGASSLEELSPLAPAGPAATPVCVKQEPSEPAAAHATLETLESTPHNNISGSTLIDRHLSLLHASAAADSADFMPLLAVKDEPLSEGEQHTPSGDDTSDSSPPPEPAARGSPKSWSQKDMDSALEALRKHHMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGAAKSWGEADLRHALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRSDLERALAAIRCGASSVQRAASQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCRYQVQGHQQMSQEIQKPHELEHQHGQDLTQYYHQSVPTHTIHHMPDDHMHENHTMHEDHRDIHKDLRSMHEEHRHMNEDHRTMHQDHRNILGDYTVHENHRPIHEDHRSIHEDHIITQHPYINQQLEQHQGMHMVQDSYTGHNGPPVYYAQSCHLTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -