Truf016360.1
Basic Information
- Insect
- Tachinus rufipes
- Gene Symbol
- nfxl1
- Assembly
- GCA_963932245.1
- Location
- OZ010742.1:102775797-102779460[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 3 9.7e+04 -5.0 1.9 15 19 161 165 161 165 0.85 2 18 0.22 7.2e+03 -0.5 0.8 4 10 196 202 195 202 0.95 3 18 1.3e-07 0.0041 19.5 16.7 1 19 210 227 210 227 0.99 4 18 5.8e-07 0.019 17.4 16.8 1 19 263 281 263 281 0.99 5 18 3.4e-08 0.0011 21.3 13.3 1 19 316 334 316 334 0.99 6 18 1.9 6.2e+04 -3.5 0.3 6 10 359 363 358 366 0.58 7 18 1.1e-05 0.35 13.3 9.5 3 18 371 386 369 387 0.92 8 18 0.51 1.7e+04 -1.7 0.4 1 4 396 399 396 400 0.89 9 18 8.3e-05 2.7 10.5 17.1 1 18 421 438 421 439 0.94 10 18 2.7e-07 0.0086 18.4 12.9 1 18 448 465 442 466 0.85 11 18 0.026 8.4e+02 2.5 4.4 10 19 515 524 512 524 0.89 12 18 0.0038 1.2e+02 5.2 6.2 1 12 534 544 534 544 0.90 13 18 3 9.7e+04 -6.9 4.5 14 18 572 576 572 576 0.86 14 18 0.095 3.1e+03 0.7 0.8 5 11 590 596 587 598 0.90 15 18 1.9 6.3e+04 -3.5 1.2 10 12 603 605 600 607 0.56 16 18 1.6e-05 0.51 12.8 7.8 1 12 613 624 613 624 0.96 17 18 4.1e-05 1.3 11.4 13.5 3 19 654 670 653 670 0.91 18 18 7.1e-06 0.23 13.9 13.2 1 18 713 732 713 733 0.86
Sequence Information
- Coding Sequence
- ATGAGTTCCTATAATCGTGGCCCCCAAAAGCCAAAAAACCCTTGGAAAAAGAATACACAACCCCAGAATGGAAATATTAATAAGAAAGCGGCTGAGGAGAAATTCAAAGCAGAACGGGTGAAATTGCAAGAAGCtgttcaaaaatatgcaaaggaTTATGAGTCTTCGGAAGAAGAAGATGAATTGGAAACTGAGGATGTTATTGggTCTATTTTGAAGAATTATGAAGTCTCAGGATCTAAATCTGAATTAATTGGTcgtacaaaactatttttagaagAAGCTTTTGTATCAGGAGCATGTACTTGTCTTATATGTATCTCGTCAATCAAAAGAAATGAAGGCatttggaGCTGCGAATCatgttattgcttttttcaCCTAATGTGTATTCAAAGATGGTCGAAAGATACGATCATGCAACAAAAACAAGCTTTAGAAGAACAAATTCAAGTTCGTCCTATTAAAATGAAATGGGGTTGCCCAAAATGCAGATTTGAGTATGGTCCACAAAACATTCCTTTAGAATATCGATGCTTTTGTGAGAAAGTTATTAATCCTACATTCCAACCGTTAATAATGCCTCATTCATGCGGTGAAACATGTGGCAAAGACTTGAAACCAAGTTGTGGACATAGTTGTCTTTTACTTTGTCACCCGGGGCCATGTCCTCCATGCCCTAAAGTGGTTAAGGTTAAATGTTACTGTGGCTCAGCAcctgaaaaacaacaaagatgtTGTAATAAGGAATGGTCTTGTGGGGCtacatgtaataaattattagcttGTGGgaaacataaatgtacacagtCTTGTCATCCTGATGAGTGCCAACCATGTCCAAAGAAGAGTATGCAAAAATGTTTGTGTGGGAATGGGATGCTGATGAGAGATTGTGCTATTCCGATATGGCAATGTAAAATGgtttGCTATAAAGCTTTAAGTTGTGGTTTTCATAATTGTGAAGAAACATGTCATACTGGTTCCTGCGGAGAGTGTcctttattaaaaacaagatcTTGTCCATGTGGTAAATCATATTTTCAGCTCCCATGTACTGAGGAAACTCCAACATGTGGCGATACTTGTAATAAAGTTTTGGAATGTGAAATGCACGTTTGCAATCAAAGATGTCATAAAGGAAAGTGCATGACTtgTGTTGAAACTGTCATCAAATCATGTCGATGTGGAATACATAGTAGGGAAATTCAATGCAAGAAATTATATTTGTGTGAAACCAAATGTAAAGAAATGAAGGATTGTAACAAACATCCATGTAACAGAAAgtgcTGTGATGGTAATTGCCCCCCATGTGAAAAACCATGTGGAAGAACATTAAGCTGCCGAAAGCATAGCTGTAGCTCAGTTTGTCATAGAGGTCCTTGCTATCCATGCAATTTAactgaaaaagttttttgtcgttGTGGACAAACCTTTCTTACAGTTCCTTGTGGTAAGAAAAGTCGTACTAGACCTCCAAAGTGTTTAAAACTGTGCAAAATGGCACCAGAATGTCATCATAAATCAAGAGAAACACATCGTTGCCACTTTAATGATTGTCCTCCATGTCGCCAAATATGCGACAAAGAACGAAAGTTGTGTTCACATAATTGTCCTAAACCATGTCATTCTGCTGTTTTGGTAAAAATTGAAGGGCAGAAAGCTTCTACTCCATGGGAAGAAACTGGACCACAACTGGCTAAAAAAGCTCTACCATGTCCTGATTGTGTTGTTCCAATGCCTGTTACCTGTTTAGGGGGTCATGAAACATGCAATTGGCCATGCCATTTAGCAAAACCATCTAGTTGTCACAAACCATGCGGAAGATTATTAAATTGTGGAAACCATAATTGCAACAAACCTTGTCATACAGTAGAAAATGCTATTGAtgattttaaatcTGGTACTAATTGCGAACAATGTGAAAGTGGCTGCCTCAAACCAAGACATGAGTTGTGTACTCATGCATGCACTAAACCATGTCATTTAGGTGCTTGcccaaaatgtaaacaaatgattCGCATTAATTGTCATTGTGGATTGACTCAACCATATGTGGAATGCAATGTATGGACTTCAACTGAAAATAAAGATGAATTACAAAGTTGTGGAAATCAATGTCCTAAAAATtttccaTGTGGTCATCGATGCAAAACAAACTGCCATTCTGGTCCATGTCCTAACGCAGAACaatgtaaaaagaaaattaaaattacttgtaaATGCAAACGAATCAAAAAGGAATTTTCCTGTGAAACTAATCGTAAGGGTGAAGCTGTTATTCTTTGTGACGACACTTGCTTTCAAAAGCAATTGGATGAgaagcaaatgaaagaacaaTTAAATGCACAGAAACGTAAAGAGGAGGAACAGAAAAATCATCAAGAATTgcaaaagtatgaaaaaatgtttcaacCAAAGAAAAAGAACAGGGAGAGAAAATACGTCGaagaaattgataataaatcattttttcaaaaatactggTTTGTAGTTGTGGGAATTATTAGTTGTATGATTGGTGTGTATTTAAGCATTAGATAA
- Protein Sequence
- MSSYNRGPQKPKNPWKKNTQPQNGNINKKAAEEKFKAERVKLQEAVQKYAKDYESSEEEDELETEDVIGSILKNYEVSGSKSELIGRTKLFLEEAFVSGACTCLICISSIKRNEGIWSCESCYCFFHLMCIQRWSKDTIMQQKQALEEQIQVRPIKMKWGCPKCRFEYGPQNIPLEYRCFCEKVINPTFQPLIMPHSCGETCGKDLKPSCGHSCLLLCHPGPCPPCPKVVKVKCYCGSAPEKQQRCCNKEWSCGATCNKLLACGKHKCTQSCHPDECQPCPKKSMQKCLCGNGMLMRDCAIPIWQCKMVCYKALSCGFHNCEETCHTGSCGECPLLKTRSCPCGKSYFQLPCTEETPTCGDTCNKVLECEMHVCNQRCHKGKCMTCVETVIKSCRCGIHSREIQCKKLYLCETKCKEMKDCNKHPCNRKCCDGNCPPCEKPCGRTLSCRKHSCSSVCHRGPCYPCNLTEKVFCRCGQTFLTVPCGKKSRTRPPKCLKLCKMAPECHHKSRETHRCHFNDCPPCRQICDKERKLCSHNCPKPCHSAVLVKIEGQKASTPWEETGPQLAKKALPCPDCVVPMPVTCLGGHETCNWPCHLAKPSSCHKPCGRLLNCGNHNCNKPCHTVENAIDDFKSGTNCEQCESGCLKPRHELCTHACTKPCHLGACPKCKQMIRINCHCGLTQPYVECNVWTSTENKDELQSCGNQCPKNFPCGHRCKTNCHSGPCPNAEQCKKKIKITCKCKRIKKEFSCETNRKGEAVILCDDTCFQKQLDEKQMKEQLNAQKRKEEEQKNHQELQKYEKMFQPKKKNRERKYVEEIDNKSFFQKYWFVVVGIISCMIGVYLSIR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -