Basic Information

Gene Symbol
stc
Assembly
GCA_963932245.1
Location
OZ010741.1:44769154-44782900[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 3 9.7e+04 -4.6 2.8 15 19 436 440 435 443 0.54
2 14 0.12 3.8e+03 0.4 0.4 4 10 469 475 468 476 0.96
3 14 3.3e-06 0.11 14.9 14.0 3 19 483 499 482 499 0.93
4 14 1.1 3.6e+04 -2.7 1.9 5 10 524 529 524 529 0.94
5 14 5.4e-05 1.7 11.1 8.9 1 18 535 552 535 553 0.92
6 14 4.7e-10 1.5e-05 27.2 13.9 1 19 593 611 593 611 0.98
7 14 1.4e-05 0.46 12.9 15.9 4 19 658 673 651 673 0.87
8 14 1.8 5.9e+04 -3.4 2.2 5 10 702 707 702 707 0.93
9 14 3 9.7e+04 -4.2 15.2 1 18 713 734 713 735 0.78
10 14 1.6e-08 0.00052 22.3 8.7 1 19 740 758 740 758 0.98
11 14 1.1 3.5e+04 -2.7 1.3 5 10 786 791 786 791 0.93
12 14 0.014 4.4e+02 3.4 14.0 8 19 803 814 797 814 0.77
13 14 1.6e-07 0.0053 19.1 18.1 1 18 850 868 850 872 0.96
14 14 0.0039 1.3e+02 5.1 15.9 3 19 880 898 879 898 0.93

Sequence Information

Coding Sequence
ATGTCCCAATGGGACCCCAGTTATGGTACCCCTCAGCATACTGAGCAGGGGTACCCCAGCAGTTACAGCTCTGGTCAACAGCAGCACCAACCACAATACTACACAGTACAAGAACTGGAGGCCCAACATTCGTATAATAATAATGCTCAGGGATCAAATGTAGATTATAAGAATAACCACCAAACAAAGAATACACGTATTGATATCCGCAATTCAAATCTGCAAGCAACTGCCTCAGAATTTCGACCAGGCTCATCATATAGTCAAGGTGCAGTCAAACGGAAACCTGTTAAGTCACGTGTTTTCAGTAGTAAATCTGATGGTTTCAATTCATCAAAGAATGATGGTCAAGATAGATATAATCGAAGATATGATTATAAACAAGACAAAGATACAGATAAATTTGAGAATAGACAAGAGCAAGATAAAACAGTAAAGGAAACAAGGTATGATTATTGGCAGGATGAAGATAAATCGGTAAAAGAAACCAGTAAGTATGAAAATAAGAAAGATCAAGGCAGGCCAGTCAAAGAATCAGGAAGGTATGAGCATAGACAGGATCAAGAAAGGCCAGTTAAAGAATCGGTAAGGTTTGAGCATAGACAGGATCAAGAAAGGCCAGTTAAAGAATTGGGAAGGTTTGAGCATAGACAAGATCAAGAAAAGCCTGTAAGAGAAACTGGAAGATATGATTATAGACAAGATCAAGAAAGAAATGTAAAAGAAAGTGGGCGGTATGATTATCGACAAAACCACAAAGAAAATAGGGGATATGATAGGCAAGATCAATATAAACCACCTAAAGAAACAGGAAGATATGACTATAGGCAAGAGCGAAGTAATACAGTTAAAGAAACAACAGAGTTCCTAAATAAAGTCAAGCTTAATTCAAGTGAACCAGCACTTGATAATAATCGTAAATATAAAGGTAACAATGGAAGTGGACGAGGTGGATAtgttaaaaagaatcaaaaatggcCAAACGATAGAAGAAATGATAATTGGAGGCACAATAGAAATGAGCGATCTGTTGAAGAGGAAAAAAATTCCCAAAAACCTGAACGAATCAATGAAGATAGAAATAGGCTATCAAAgccaaaagaattaaaaaagaaattggATGCTGCATCTCAACGAGAACGTTTAGAACAGATGGTAACACATAGGTTGTTGGAATGCTTGGTATGTTGTGAAAAATTACGTCATACTGATAAAATATGGTCATGTAAACAATGTTTCCATATTTTACATCTTAGCTGTGTTATACGTTGGGCAAAAGCATCCAAACTAGAATCAGGTTGGAGATGTCCTGCTTGTCAAAATATATGTCTTGAAGTCCCTAAAGAATATCGATGCTATTGTGATAAATATAAAGATCCATCATTAGAACCAGGCACATTACCTCACAGTTGTGGACAAGTATGTAGCAGGAAAGGACGTTCATGTGAACACACTTGTACTCTATTATGTCATCCAGGTCCTTGTCCTGATTGTACTGTAATGGTTGCAAGATCATGCGGTTGTGGTGCTACTAAACCTACAGTTAAATGCAGTTCTGATATACAAATAACATGCCAAAATACGtgcagtaaattattaaattgtaatttacataCATGTAATAAAACTTGTCACGTAAATGATTGTGATAATTGTGAAGAAagtgtaattcaagaatgtttttGTGGGAAACTTGGCAGAAAAGTGAAGTGTACTGAAGAGGTACGAGATGTTAAGAATTATGAATGTGGGGATGTTTGTCAGAAGCTTTTAAATTGTGGGAACCATACGTGTGAATTACTCTGCCATCCGGGTGAATGTGAGCCTTGCAAGACACATCCTGACACTATTAAAACATGCCCATGCGGGCAAAGTACGTTGTCTTTGAATCGGAATTCGTGCCTTGATCCTATTCCTTGCTGTGATAAGgtttgtgaaaaaaaattaaaatgtggtCAGCCAAGTCATCCACATAAATGTCAATCTAACTGCCACGTGGGTGACTGTCCAGTATGTCCGTTAACTACTTTAGTTCGCTGCAGATGTGGACATATGGATAAAGAATTGGCCTGCAGGGAATTAAAATCTAAAGCTGATGATGCAAGATGCCAGAAGAAGTGTACTAAAaAACGTTTATGTTGTAAACACAAATGCAATCAGTTATGTTGCATAGAGCTTGAGCATGACTGTCCACTGCCATGTAATCATTTGTTAACTTGTGGATTACATAGATGTGAACTGAACTGTCATCGTGGACGTTGTTTGCCTTGTTGGAGAACTAGTTTTGAGGAACTATATTGTGAATGCGGTTCGAGTGTGATCTATCCACCTGTTGCTTGTGGTACCCGCCCACCGACATGCTCAAAACCTTGCTCAAGACAAAGGTTATGTGGACATGATGCACATCATAATTGTCATTCAGGTGCTTGCCCACCTTGCACCATCTTTACTACTCGATTGTGTTATGGCCAACATGAACAACGTCAAACCATTCCATGTTATCAGGATGACTTCAGTTGTGGTTGCCCATGCAATAAAGATATGTACTGTGGACGACATAAATGCATACAAACTTGCCATAAAGGCCGCTGTCCAAATCCATGCAATCAACCGTGCACTATCATTCGACCAAACTGTGAACATTCCTGCAACCAACCATGTCACGAACCACCATGCCCAAACGTGCCTTGCAAAcaaacagtaacagtaacatgTCAGTGTGGATTACGTAGCAGTACTAGACTCTGTATTGATTTAGCTGGTGAATACCAGAAAATTGCTATGTCCCAATTAGCAACCAAAATGGTTGATATACAAAGAGGACAATCTGTTGATATTTCAGATTTAGTTAAGACTAAAAAAAGTGGTTCACATAAAACattagaATGTAATGACGAATGTCGTTTAGTGGAACGTAATCGACGTTTAGCAATAGGCCTTCAAATTCGTAATCCTGATTTAAGCGCCAAGTTAACGCCAAGATATTCTGAATATATGAGAGGTTGGGCTAAGAAAGACGCCAGATTTTGTCAAAATGTGCATGACAAATTAACCGAATTGGTACAACTTGCCAAACAAAGTAAGCAAAAAAGCAGATCACATTCCTTTGAGTGCATGAACAGAGAAAAACGTCATTTGGTACATGAGTACTGTGAACATTTTGGATGCGAAAGTGCTGCCTACGATAAAGAACCCAATAGAAATATTGTTGCTACAGCCTTTAGagaTAAATCATGGTTGCCCAGTGTtagtttaattgaattattgcaACGTGaaaatggacaaagaaaagtaCCAGGTccagttttgaataaaacagATTGTACTAGAACTATTGGTCGTAGCAATCAATctgtttcattaaaattacaGAGTCGTAATATTGTAACACGTCCGGTTACACCTCCAGCTGAGTTTgtagattattttgataatcCTCCCTAA
Protein Sequence
MSQWDPSYGTPQHTEQGYPSSYSSGQQQHQPQYYTVQELEAQHSYNNNAQGSNVDYKNNHQTKNTRIDIRNSNLQATASEFRPGSSYSQGAVKRKPVKSRVFSSKSDGFNSSKNDGQDRYNRRYDYKQDKDTDKFENRQEQDKTVKETRYDYWQDEDKSVKETSKYENKKDQGRPVKESGRYEHRQDQERPVKESVRFEHRQDQERPVKELGRFEHRQDQEKPVRETGRYDYRQDQERNVKESGRYDYRQNHKENRGYDRQDQYKPPKETGRYDYRQERSNTVKETTEFLNKVKLNSSEPALDNNRKYKGNNGSGRGGYVKKNQKWPNDRRNDNWRHNRNERSVEEEKNSQKPERINEDRNRLSKPKELKKKLDAASQRERLEQMVTHRLLECLVCCEKLRHTDKIWSCKQCFHILHLSCVIRWAKASKLESGWRCPACQNICLEVPKEYRCYCDKYKDPSLEPGTLPHSCGQVCSRKGRSCEHTCTLLCHPGPCPDCTVMVARSCGCGATKPTVKCSSDIQITCQNTCSKLLNCNLHTCNKTCHVNDCDNCEESVIQECFCGKLGRKVKCTEEVRDVKNYECGDVCQKLLNCGNHTCELLCHPGECEPCKTHPDTIKTCPCGQSTLSLNRNSCLDPIPCCDKVCEKKLKCGQPSHPHKCQSNCHVGDCPVCPLTTLVRCRCGHMDKELACRELKSKADDARCQKKCTKKRLCCKHKCNQLCCIELEHDCPLPCNHLLTCGLHRCELNCHRGRCLPCWRTSFEELYCECGSSVIYPPVACGTRPPTCSKPCSRQRLCGHDAHHNCHSGACPPCTIFTTRLCYGQHEQRQTIPCYQDDFSCGCPCNKDMYCGRHKCIQTCHKGRCPNPCNQPCTIIRPNCEHSCNQPCHEPPCPNVPCKQTVTVTCQCGLRSSTRLCIDLAGEYQKIAMSQLATKMVDIQRGQSVDISDLVKTKKSGSHKTLECNDECRLVERNRRLAIGLQIRNPDLSAKLTPRYSEYMRGWAKKDARFCQNVHDKLTELVQLAKQSKQKSRSHSFECMNREKRHLVHEYCEHFGCESAAYDKEPNRNIVATAFRDKSWLPSVSLIELLQRENGQRKVPGPVLNKTDCTRTIGRSNQSVSLKLQSRNIVTRPVTPPAEFVDYFDNPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-