Basic Information

Insect: Tachinus rufipes
Gene Symbol: -
Assembly: GCA_963932245.1
Location: OZ010742.1:3073246-3088154[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0035 0.91 12.4 0.1 1 23 232 255 232 255 0.97

2 7 0.19 49 7.0 0.2 3 21 363 381 362 382 0.91

3 7 3 7.9e+02 3.2 2.9 1 13 387 399 387 415 0.78

4 7 0.057 15 8.6 2.5 1 21 511 531 511 532 0.93

5 7 3.7 9.6e+02 2.9 4.4 1 23 620 642 620 642 0.97

6 7 0.0042 1.1 12.2 2.2 1 17 776 792 776 797 0.90

7 7 0.0028 0.74 12.7 1.0 1 23 804 827 804 827 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0035	0.91	12.4	0.1	1	23	232	255	232	255	0.97
2	7	0.19	49	7.0	0.2	3	21	363	381	362	382	0.91
3	7	3	7.9e+02	3.2	2.9	1	13	387	399	387	415	0.78
4	7	0.057	15	8.6	2.5	1	21	511	531	511	532	0.93
5	7	3.7	9.6e+02	2.9	4.4	1	23	620	642	620	642	0.97
6	7	0.0042	1.1	12.2	2.2	1	17	776	792	776	797	0.90
7	7	0.0028	0.74	12.7	1.0	1	23	804	827	804	827	0.93

Sequence Information

Coding Sequence: ATGTTTGTTTCCACGTCAGGAGAGAGATATCCGatatACCGCACAGATCCTCTATCAAAAGAAATATGTGAATCCTGTAATGAAATTGTAGACACAATATATAGTTTTAAGCAAAGTACTTTGGACGTCGTTCAGAAGCAGAAAGAAGATCTACTGTTAAAATCTCCTGATGCAAAAATACAACTATACCTCGACTTACTATCAAATCAAAATGGGGACAATACCAAATGCAACGGCGTCGAACCgcccaacaacaacaaacatcaCGTAGCAATGGAGGAAATCAGCACACTAACAGAAACCTCAACATTCAATTTCAACGACACTCAACACAATGAGGAAAGTTCAGACCTCCTATCTGTAATATCAACAGCCGATAATAACACCATGAACGGTATCGATGATGAAAGCGATATGGAATTGGAAACATTAGAACcatcaaaaattatagaaacaaataGAAAGCGACGAATTAGAGGCAGCGATTACAACAGTCCTATACCGAAAAGACGTCGCATAATAGGTCCCAAATCAAAAGTAGAAAGTccgattaaatataaaactgttaaattagaatattataaTCCGTTATCGTTATTAAGATGCACGATTTTGGCTATGAATAAGAATAATATTGAAGGGTTTGCTGGGTTACCGTACGATCACATTAAGGAGGAACATGAAGAAATGATTTTCTATTGTAATTACTGCCAGATTGTTTTTGAAAGTGGTAATGAATTGGCGATTCATGAAATGACCGATCATATACAGTTGAGTTTAGAAAGGGTTGATTTGTTGGAGTATTGGGATGAGGAAGATCAAGATTccaatattagaaataaatggTTGAAAAATAGTTATCATTTAAATGAAGGTTTTGCTGAAGATGATGATGAGGAGGAAGAGGAGGATTTGTTAATGCCTATGGAGGAATCTGAAGGTACTGTTGATACGAcgcttaataaagaaattatgtttgttaacGAGCAACCTACTATTAATGGAGTTCCGTTACGTGATTTACCTAAGGATAAAAGAAGCGAGTTCTATCAAAGTGTAAGATTGAGTGGAGTTAGAaggaaattttgtaatttatgccGATATACTTTTAAAGATAATTGGGCTATTGAGTTGCATTACATGTCGCGGACTTGTTATTACAGTTGTAACTATTGCGgggttaaatataataaaaacaaaccggCATTCGCCGAACATATTCAGGATCATATTAGGGCTGGACATAAAAAATCCAATAAGGTATTTGTAAATCGTTCTAAAGGAGGTACCGAACCTAGAGAATTGGATGCGAGCACTATGAAACCATACATTCCAGTTCCACGGAGGTATTACGGTAACACAAAAGTGAAACCTATAAAGATGAAGTCGTTAATGGAAAGGAAACGTGTTAATGTAAGCAGTTTCCAAACGTTTAAAAAGGAAGTTGATACGGATTATACACCGGCTATGGAGATGAAACCGGTTCTTAAGAAAATGACGACTGCTGATTTGACTGAAGATACGCAGGCGTATTTCTGTAAGAAATGTTATCAGGTGTTTGCGAGGTTTGATGAATATCAATTGCATCATTCTACTTGTACTGGGGAGATTGATGATCCTGAAATGAAGgtaATAAGACCTTACATACGTAAAGATAAAGAGCAAACCCAGACATACAATTACAACACAACATTCAAACGGTCTCCAATAAAACAGCAACCATTTGATGATACAACACCTCCTCAAGTGAAAGGATACTCGTCAGCAGGACGACCAATACGCCATTGCGTCCGCGAAGTAAGTTACTCCGATGAAAAAGAAGTCGAATACCGTGCATCACCTTCAGCTCCAGGCCGATTCGAATGCAATTTCTGTTGTTCAGTATTCCCAACAGTGCATTCTCGCAACAGCCACATGCGAATCCACAAAAGTAATTTCAAACCTGCAGTGGGCAGTCCCCCTGGTAAACCATTAAAAACATACGGACATAATAACATGGATGATACTCCAAATCGATTCAATccagctaaaaaaattaagcaagaaATTTATGAACCAATCGTTGATATACATGAAGGTCCTTCTTCGAATAAAATGCCGTCTAGTATTGGTAGCGTTAGTATCACTCCGTTAAGACGCAACAATCAACAACCGGCCACTGTAAGTCCGGCTATAATGAAATTGGtacaaaataatccaaatataACATTGAAACCTAAAGCTGAAGCCACCAAGAATATTATTATACCGAAATTAGAACGTCAAAGTCCACCACCTGATAATTACGATGATTCACAACAAGATTTTGCTCCTGGTGAACGTACCTATAAATGTTCCAGTTGCAACAAACCGTTTGCAAATAAATCCAATTTGTATTTCCATAAAAAGAATCAATGTGGAGGATCGAAATATCCATGTCCGTTTTGCAAAAAGCGATTCGGAACTGAGGCCTCTTATAGTTCTCACATATTCTACAGTCATCCCGTATAA
Protein Sequence: MFVSTSGERYPIYRTDPLSKEICESCNEIVDTIYSFKQSTLDVVQKQKEDLLLKSPDAKIQLYLDLLSNQNGDNTKCNGVEPPNNNKHHVAMEEISTLTETSTFNFNDTQHNEESSDLLSVISTADNNTMNGIDDESDMELETLEPSKIIETNRKRRIRGSDYNSPIPKRRRIIGPKSKVESPIKYKTVKLEYYNPLSLLRCTILAMNKNNIEGFAGLPYDHIKEEHEEMIFYCNYCQIVFESGNELAIHEMTDHIQLSLERVDLLEYWDEEDQDSNIRNKWLKNSYHLNEGFAEDDDEEEEEDLLMPMEESEGTVDTTLNKEIMFVNEQPTINGVPLRDLPKDKRSEFYQSVRLSGVRRKFCNLCRYTFKDNWAIELHYMSRTCYYSCNYCGVKYNKNKPAFAEHIQDHIRAGHKKSNKVFVNRSKGGTEPRELDASTMKPYIPVPRRYYGNTKVKPIKMKSLMERKRVNVSSFQTFKKEVDTDYTPAMEMKPVLKKMTTADLTEDTQAYFCKKCYQVFARFDEYQLHHSTCTGEIDDPEMKVIRPYIRKDKEQTQTYNYNTTFKRSPIKQQPFDDTTPPQVKGYSSAGRPIRHCVREVSYSDEKEVEYRASPSAPGRFECNFCCSVFPTVHSRNSHMRIHKSNFKPAVGSPPGKPLKTYGHNNMDDTPNRFNPAKKIKQEIYEPIVDIHEGPSSNKMPSSIGSVSITPLRRNNQQPATVSPAIMKLVQNNPNITLKPKAEATKNIIIPKLERQSPPPDNYDDSQQDFAPGERTYKCSSCNKPFANKSNLYFHKKNQCGGSKYPCPFCKKRFGTEASYSSHIFYSHPV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -