Basic Information

Insect: Tachinus rufipes
Gene Symbol: L
Assembly: GCA_963932245.1
Location: OZ010750.1:17811193-17836260[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0011 0.3 13.9 1.2 1 23 83 105 83 105 0.97

2 14 0.0071 1.9 11.4 1.3 1 23 131 154 131 154 0.97

3 14 0.12 32 7.6 0.7 3 23 187 208 185 208 0.96

4 14 0.02 5.4 10.0 0.1 1 23 245 268 245 268 0.94

5 14 3.7 9.8e+02 2.9 0.2 3 23 391 411 391 411 0.94

6 14 0.32 83 6.3 6.5 3 23 421 442 420 442 0.92

7 14 0.012 3.1 10.7 1.8 1 23 447 470 447 470 0.92

8 14 0.0065 1.7 11.6 0.5 1 23 531 554 531 554 0.92

9 14 0.0002 0.053 16.3 4.4 2 23 640 661 639 661 0.97

10 14 6.4e-05 0.017 17.9 0.6 1 23 670 692 670 692 0.97

11 14 0.79 2.1e+02 5.0 0.9 2 23 700 721 700 721 0.96

12 14 1.3 3.3e+02 4.4 0.1 1 23 819 841 819 842 0.91

13 14 0.0012 0.31 13.9 0.2 1 23 878 900 878 900 0.97

14 14 0.003 0.78 12.6 3.2 1 23 907 929 907 929 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0011	0.3	13.9	1.2	1	23	83	105	83	105	0.97
2	14	0.0071	1.9	11.4	1.3	1	23	131	154	131	154	0.97
3	14	0.12	32	7.6	0.7	3	23	187	208	185	208	0.96
4	14	0.02	5.4	10.0	0.1	1	23	245	268	245	268	0.94
5	14	3.7	9.8e+02	2.9	0.2	3	23	391	411	391	411	0.94
6	14	0.32	83	6.3	6.5	3	23	421	442	420	442	0.92
7	14	0.012	3.1	10.7	1.8	1	23	447	470	447	470	0.92
8	14	0.0065	1.7	11.6	0.5	1	23	531	554	531	554	0.92
9	14	0.0002	0.053	16.3	4.4	2	23	640	661	639	661	0.97
10	14	6.4e-05	0.017	17.9	0.6	1	23	670	692	670	692	0.97
11	14	0.79	2.1e+02	5.0	0.9	2	23	700	721	700	721	0.96
12	14	1.3	3.3e+02	4.4	0.1	1	23	819	841	819	842	0.91
13	14	0.0012	0.31	13.9	0.2	1	23	878	900	878	900	0.97
14	14	0.003	0.78	12.6	3.2	1	23	907	929	907	929	0.98

Sequence Information

Coding Sequence: ATGTGGAATGCTCCATATCTCATGGGTAGACCACATTACCAACGACGAAGTGCTGAGAAGGGCAGGAGTGGACAGATTACTATTCAACACCATAAAGCAGCGCAAGATAGGATACCGGGGTCACTTACTAAAGGGGCCAAAATATCGAATTCCTCAGCTCATACTCAATGGAAATATAGAAGGCAGAAGAGGCATCGGACTGACCATTTAAAAATCCACATGAAAACCCACGACAACAAGAAACCTCATCAATGTGAATTATGCAATCGGGGCTACAATACCGCGGCCGCACTCGCCTCTCATCAGCAACATCACTCGAAACAAGAACAACGCCGCTGTGGAAGCAGTGCCAGTAGGAGTAGTGCCGTGAGTACTCCAAGCCCTTGCAATTATCGATGCCTCCAGTGCTCCGATACATTCGAAAAGGCGGAACACTTACagAATCATTTAATGGTTAACCACGTGAATACTTCACCTCCGACATCGCAGGCTAATAACTTATTATTGGACACGAGTTTTAACATACTGAAAACAACAATCGAGTTGCCAAAGATAGCTTGCATGTATTGCGGTAAAGATTTCCTAAGCATGAACCACATGTATCAGCATATAAACACAGAGCACAGAGCCATATTCAACAGTATTTCACAGAATATGAATTACACCCCCTTGCAGTCACCTGGCATCGAAGATTTATCGCCCAAACAAGCACGCCAAAATAATTCACCAACGTATGCCTGTGATCGCTGCACAATGAGATTCGATTCCCCGCTCCTGTTGCAAGAACACATCGAGAATGTGCACTGGGGACCGACGGAATTATACAAATACGACTTCGCCGGCTTGTCAAATTCGAATATTTCATCAGAGAAGGTTCCGACTAATGCCTCTCAATCAAAGCCAACTGATCTCAGTCGTAAAAGGCCCTCGGAAAATCCACCCGAGTATAAATTGGAGAAGAAAAAAGGCGACGAACAGCCACCAGATACAAAACAAACTTCGCCTTCTACTGCAAGTCCATATGATTCAAATGATAAACCCTGCATTTGTTCATATTGCTACGCACAAATGCcgaattttaaaatgtttttagtgcATATGGAATCGCATATCGGTATGAATGCATCGAGCGCTATTCTACCCTTAAGCACAACTAGTAACCTAATCGGTTGTTGTCTCTGTGGAGAGCCGGCAAGAAATGCTTTGGAATTAGGCCGTCACATTTTCGGACACGCCATCGCGAACGTCACGGCACGTTGCTGTCACTGCTGCAAGAAACCCTTTGAACAATTAGACCAACTGCAAAAACATCTACTCGAATCCCATTCACAAACAGTATATAAATGTACTATCTGCAATGAGATATTTGACACTCATCTCGCTCTTCAGatgCACTTTTCGAATAAGCACAGTCCCGAATGCAAACATTACCGATGCAACTTGTGTTCCGATCAAGTTTTCCACGATCGATTAACGGCCGAAATCCACGTCAACATGAAGCACAGCATACAAGCACCACTTAGTTCAAACGCCAGAAGTTACCACTTGTCAAGATTTCCCGATATGGAGCCGCGGCTTGATTTCCCATCTTTTCCATGTCCATTTTGCCAGAAATCATTCAAGGATGAATACGTGCAATACATTCACATTCTCAAAGAGCATAACAGCTCTCATGAgGGTGAAAACTTCCTGTTAGAAGCAAGTTTCGTCGGCAGGAACGTTCCGTCCGCATCACCgaactttttatataataagacCGTCTCGCCATCAGAAAATCTAAACAAGCGAGATATGACTAAAGTGGGTGGCAATTACAGTTGTGAGATATGTAATCGCAACGATATTGGAAGCGAAGCTGAATTGACGGCACATAAAAAGTTGCATCACGCTAAATCTAAAGTGGGAACTGTTAGCTTACAGTGCGCGTATTGCAACGAGCATTGCAAGTCGAGGAGTGATTTAGAAAATCACATGAAGTCCCATCAGATTGCATGCGGGAAGGGAAAACATAAGTGCAACATATGTGATGAAATATTTTCGTCGAATGGGACATTGGCTGAACATAAGTTATCGCATTGCAAGATTGTAGCCGGAAATAGTTGCACCCAATGTAAAACCATCCTTGTCGACGAGCAATCGTTTTACAATCATCAACAGCAGCACAGTAATACATCAGtggttaataaaactaattcacAAATGTCGCTTCCAGCTAACTGTATTATATGCTGCCAAACGCTTCAAACTGATGTGGAAATTAAACTACACGCCAAGTTTCATCTCAGACATTTACTACAAAAAGAATTCGTTTGCGCTGTGTGTAATAAAGTTGGACAGAACATGAAACACATTGACAAGAATAATATTCCGGTGAATATATGCAAAGATTGCATCCTGAATACATCCAATGGATCATTTAGTCCACACCTAGACTTGAACGACCATAAAAAGGCTTTCGCTTGCTTAAAATGTCCGCAAAGCTTAgatacagaagaagaaatacaaAATCACGCAGCGGAACATCATCATGAAGAACCTAATTTGGAATGTCACTTATGCAGGAACGTACAACTATCTCCTTTAAAGctacaaatacatttaattgaaCATAATTTCATGGGAATGGGTCAATACCGCTGTTACGTTTGCTCTTCAGTATTCACAACAGCAACCGGATTACGAAGTCACATTATAGGACACGGCTTAAGCCATCGACTATACGAATGCAGCGATTGTAAAatgaaattcttttttaaaactgaattggAAAATCATAAATATACGCATCTCCATTCCAATAATAAAAACGGATACGAGTGCTACGAAAAAAATAGACAATACATTGAATGTAAAGGGTGTTTAATTAACTTCCCTGAAGACGTTTATTACAGTGATCATGTTGGAAAATGCGCCAAAACTGAAGAAACTATAGACATTAAAGATGATGTCAAAATAGAAGAGCCATGCAGTGAAGACGAACCAAAAACGCATTAG
Protein Sequence: MWNAPYLMGRPHYQRRSAEKGRSGQITIQHHKAAQDRIPGSLTKGAKISNSSAHTQWKYRRQKRHRTDHLKIHMKTHDNKKPHQCELCNRGYNTAAALASHQQHHSKQEQRRCGSSASRSSAVSTPSPCNYRCLQCSDTFEKAEHLQNHLMVNHVNTSPPTSQANNLLLDTSFNILKTTIELPKIACMYCGKDFLSMNHMYQHINTEHRAIFNSISQNMNYTPLQSPGIEDLSPKQARQNNSPTYACDRCTMRFDSPLLLQEHIENVHWGPTELYKYDFAGLSNSNISSEKVPTNASQSKPTDLSRKRPSENPPEYKLEKKKGDEQPPDTKQTSPSTASPYDSNDKPCICSYCYAQMPNFKMFLVHMESHIGMNASSAILPLSTTSNLIGCCLCGEPARNALELGRHIFGHAIANVTARCCHCCKKPFEQLDQLQKHLLESHSQTVYKCTICNEIFDTHLALQMHFSNKHSPECKHYRCNLCSDQVFHDRLTAEIHVNMKHSIQAPLSSNARSYHLSRFPDMEPRLDFPSFPCPFCQKSFKDEYVQYIHILKEHNSSHEGENFLLEASFVGRNVPSASPNFLYNKTVSPSENLNKRDMTKVGGNYSCEICNRNDIGSEAELTAHKKLHHAKSKVGTVSLQCAYCNEHCKSRSDLENHMKSHQIACGKGKHKCNICDEIFSSNGTLAEHKLSHCKIVAGNSCTQCKTILVDEQSFYNHQQQHSNTSVVNKTNSQMSLPANCIICCQTLQTDVEIKLHAKFHLRHLLQKEFVCAVCNKVGQNMKHIDKNNIPVNICKDCILNTSNGSFSPHLDLNDHKKAFACLKCPQSLDTEEEIQNHAAEHHHEEPNLECHLCRNVQLSPLKLQIHLIEHNFMGMGQYRCYVCSSVFTTATGLRSHIIGHGLSHRLYECSDCKMKFFFKTELENHKYTHLHSNNKNGYECYEKNRQYIECKGCLINFPEDVYYSDHVGKCAKTEETIDIKDDVKIEEPCSEDEPKTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -