Basic Information

Insect: Tachinus rufipes
Gene Symbol: -
Assembly: GCA_963932245.1
Location: OZ010742.1:1220734-1222439[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0002 0.053 16.3 1.0 1 23 20 43 20 43 0.96

2 10 0.00069 0.18 14.6 0.8 1 23 49 71 49 71 0.97

3 10 0.009 2.4 11.1 1.5 1 23 133 155 133 156 0.94

4 10 0.25 66 6.6 1.1 8 23 162 177 161 177 0.94

5 10 0.00026 0.069 15.9 3.7 1 23 183 206 183 206 0.96

6 10 8.7e-05 0.023 17.5 0.3 2 23 213 235 212 235 0.95

7 10 0.0003 0.079 15.8 1.5 2 23 241 262 240 262 0.97

8 10 0.0003 0.079 15.8 0.6 1 23 274 297 274 297 0.96

9 10 0.00086 0.23 14.3 1.3 1 23 303 325 303 325 0.95

10 10 0.00079 0.21 14.4 5.0 1 22 331 352 331 352 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0002	0.053	16.3	1.0	1	23	20	43	20	43	0.96
2	10	0.00069	0.18	14.6	0.8	1	23	49	71	49	71	0.97
3	10	0.009	2.4	11.1	1.5	1	23	133	155	133	156	0.94
4	10	0.25	66	6.6	1.1	8	23	162	177	161	177	0.94
5	10	0.00026	0.069	15.9	3.7	1	23	183	206	183	206	0.96
6	10	8.7e-05	0.023	17.5	0.3	2	23	213	235	212	235	0.95
7	10	0.0003	0.079	15.8	1.5	2	23	241	262	240	262	0.97
8	10	0.0003	0.079	15.8	0.6	1	23	274	297	274	297	0.96
9	10	0.00086	0.23	14.3	1.3	1	23	303	325	303	325	0.95
10	10	0.00079	0.21	14.4	5.0	1	22	331	352	331	352	0.97

Sequence Information

Coding Sequence: ATGGTGCAACATTTAAGAACTCATAAGAATGATGATGTGCCAGTTGAGAAGAAACCTTTTAATTGTTTGGAATGTGATAAAGGGTTTGATACAAAAAGATATTTGCTTATGCATAATAGGAGGGTGCATATTGGTGATGCTAGATATGCTTGTCAGTATTGCGATAAGCGTTTTGTATCTGCTCAAACTAGAATAGATCATGAAAAGAAGCATCTTTCAGCTACACCGTTCCTCTATCCTGGTGACgaaattaaaatagaagaagaatacaaatttgataacaatGAAGACGATTTAATAGATGATGAAAAACAAACTAACTATAGCGATTATAATACACAAACTGATGAATCCGAAGAAGATTCAGCAACATTTGATGAAGATTCAATTACGGATTACGCATGCTATATATGCAATGAAGATACAATGAATAAAACCgatttaaaaagacattttgaTATACATCATTTAGGAAGCCGAGTTAgGCGTTTTAAATCTCTATCACAACTACAACAACATTCGAATAGACATAGTGGTAAAAAACCATTCCAATGTGATAAATGTGATAAACACTATTACCAAAAAGTAACTTTACAATATCATTTAGCATCAAAACATGAACCAACCAAAAGTCTCAAATGTcatatttgttctaaattatttCGTACTCCTGGTCCATTAAGAATTCATATAGAATCAGTTCATGAAAGTAGACATGTTACTTGTGATATTTGCGGAATGAAGCTAGCTCATAAGTATTATATGAGTAGACATTTAAAAACGCATAAGAATGATGATGTTCCGAAAAAGAAGAAACCATTTTCGTGCTCGATTTGTAAAGCTGGATTTATtagtgaaaaaaatttaagatatcATAAGAGGTTGGTGCATCGTACTGAAAATGAGTTTGCATGCAAGTATTGTGATAAAAGGTTTGCGTATCCTCGGACTAGAAAAGATCATGAAAAGGGGCATTTTTCAGAGAAGCCGTTTGAGTGCAAGTATTGTAAGAAGAAATATTCTTCTAGTAGTTCTACGTATCATCATCAGAGAACATGTAGTGCTAAagataaatga
Protein Sequence: MVQHLRTHKNDDVPVEKKPFNCLECDKGFDTKRYLLMHNRRVHIGDARYACQYCDKRFVSAQTRIDHEKKHLSATPFLYPGDEIKIEEEYKFDNNEDDLIDDEKQTNYSDYNTQTDESEEDSATFDEDSITDYACYICNEDTMNKTDLKRHFDIHHLGSRVRRFKSLSQLQQHSNRHSGKKPFQCDKCDKHYYQKVTLQYHLASKHEPTKSLKCHICSKLFRTPGPLRIHIESVHESRHVTCDICGMKLAHKYYMSRHLKTHKNDDVPKKKKPFSCSICKAGFISEKNLRYHKRLVHRTENEFACKYCDKRFAYPRTRKDHEKGHFSEKPFECKYCKKKYSSSSSTYHHQRTCSAKDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -