Truf010614.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tachinus rufipes
Gene Symbol
-
Assembly
GCA_963932245.1
Location
OZ010742.1:1347222-1356311[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.24 63 6.6 1.0 1 23 31 54 31 54 0.91
2 18 0.49 1.3e+02 5.6 0.8 1 23 73 95 73 95 0.96
3 18 0.017 4.5 10.2 0.2 1 23 99 121 99 121 0.96
4 18 0.00081 0.21 14.4 1.3 1 23 127 149 127 149 0.99
5 18 3.3 8.8e+02 3.0 0.1 1 23 155 178 155 178 0.92
6 18 0.016 4.3 10.3 0.2 1 23 184 206 184 206 0.96
7 18 0.63 1.7e+02 5.3 2.6 1 21 259 279 259 282 0.89
8 18 0.00017 0.045 16.5 0.3 1 23 300 322 300 322 0.98
9 18 7.6e-05 0.02 17.6 0.8 1 23 326 348 326 348 0.98
10 18 9.8e-05 0.026 17.3 0.7 1 23 353 375 353 375 0.99
11 18 0.001 0.27 14.1 0.7 1 23 381 403 381 403 0.99
12 18 2.7 7.1e+02 3.3 0.6 1 11 410 420 410 424 0.81
13 18 5.4 1.4e+03 2.4 5.5 3 23 496 516 492 516 0.90
14 18 0.056 15 8.6 1.5 1 23 548 570 548 570 0.98
15 18 3.3e-05 0.0086 18.8 0.7 1 23 577 599 577 599 0.99
16 18 0.0031 0.81 12.6 3.4 1 23 605 628 605 628 0.95
17 18 0.00073 0.19 14.6 0.5 2 23 636 657 635 657 0.97
18 18 0.00082 0.21 14.4 3.8 1 23 661 683 661 683 0.97

Sequence Information

Coding Sequence
ATGTTAACACTGGATGAACTTATCCTATCCACGGAAACATTACTAGCAGCATTAGAAACACCAGAAGAATCCGATGGATCGTTTCGATTTTTTCTATGCACCCTTTGCGAAAAAGCTGGTTTCACCAAAGATCAATTCCTAAAACATTTCGATAAAGCTCATCCACGTCATGTAGTACGATTCCGTTACCAAAAACATGGATTTGGAGATGAATTCCATCAATGCGAAATATGTCTAGATGCGTttgattcatttaataaattaaacgaaCATTATGCTTCTCACGAAAACCAATTTTACTGTGAAATATGCAATGaaggttttaaattattgtattataaagaAATACATATGATAGGTCATAGCAACGAAGTACAATACACATGTTCAGTttgtaatttcatttttgaaaggaaaggtgatattttaaaacatttcaaaacgcATCGAGATGTATTCATTTATAGATGTGTTgtatgtgaagatcgttttGAAATTAGGGAACAATTGGATGATCATGTTATGGGTTATCATATATGGGAGAATCTATATAGATGTTATATATGTGGTGAAGAACTTGCTGATTGTGCAGATTTTAATGAGCATAGAGTGATACATTTTACTGATCCTAATGttaaaaagagaaagaaaattaagaaagtagTCAATATACAAAaacaaattttaacaatttatatttttaggcaCATTACAACCAAAGATTTAACTGATCCACTAGACTTAGGAGAACAACAAGACGGCTTATTCAGTTACTTTCAATGTTATGTTTGTAGGAAAGATTGTATGACCAAAGCTGAATTTCTAAATCATTTCGACGAATTACATGCGCGTAACCAGATACGTTTTCGATACAAAAAAGGCCTCGGAGACAAATATTATCAATGCGAAATATGTGATGTACCTTTTggttcatttcataatttaaatgaaCATTACGCAGTACATGAGAATCATTATTATTGCGATATatgcaataaaagttttaaagtattatacgataaaataaatcatatggTAACACATTgtactgaaaaatataaatgttcaGTTTgtaatgctatttttgataagAAGAAGGATATTAATAGTCATATTCGGACGCAtcgtaatatgtttatttacaGATGTGTTATTTGTAATATCCGTCTTCAGTCTAGGGATAAACTTGATAAACATATGATGACCCATCTTGGAAATACTGTATTATATTCATGCCATATTTGTGATCATCATTCTAATAATTATGAAGAAATATCACCTAAAGAAGAACCCGATGAccatttaatttacataaaatcagaACTGGAAGATATTTACACAAACGAAGAAATTGATTACATATGCTTTATTTGCAGAGAAGAAACAATGACTAAAACCGATTTAGAATTCCATTTCATGCACGAACATGATAACACCAAAATAACCTATAAACGCAAATACGAATTAACCAATGAATGCCATCTTTGTGAAATATGTTGCGAAGAATTTGAttcattaaagaaattaaatcaacattaccAAAACCacgaaaataaacatttttgtgaaCAATGCAATTcaggatttaaattaattattgataaaataattcataTGTTCAATCACAGCACTGATGGTTATTATGAATGTTTAGTATGCGatcataaaactaaatataggAACAATATTGAATTGCATATTGATAAACATGTTAATACAATggcaatttataaatgtaaaatatgcattaaGAGATTTCGATCGGTGGAGCAGTTGAATATTCATATGAATGTGCATACGGGTATGAAGCCATTTCCTTGTGATTGTTGCGATAAGGCTTTTTCTTATAGTAAATCTTTATTTGcgcataaaaagaaaatgcataATATAGATCCTGatgttattgtttgtaaaatatgtaaaaaaactagGCAAACTGAATCGGGTATGGTTAGGCATATGAGGATACATACTAAGAATCATATATGTGATATATGTCAGAAGGCTTTTAAAGAAAAGTGCAAATTAGCTTTACATATTAAGAAACATTATCAATag
Protein Sequence
MLTLDELILSTETLLAALETPEESDGSFRFFLCTLCEKAGFTKDQFLKHFDKAHPRHVVRFRYQKHGFGDEFHQCEICLDAFDSFNKLNEHYASHENQFYCEICNEGFKLLYYKEIHMIGHSNEVQYTCSVCNFIFERKGDILKHFKTHRDVFIYRCVVCEDRFEIREQLDDHVMGYHIWENLYRCYICGEELADCADFNEHRVIHFTDPNVKKRKKIKKVVNIQKQILTIYIFRHITTKDLTDPLDLGEQQDGLFSYFQCYVCRKDCMTKAEFLNHFDELHARNQIRFRYKKGLGDKYYQCEICDVPFGSFHNLNEHYAVHENHYYCDICNKSFKVLYDKINHMVTHCTEKYKCSVCNAIFDKKKDINSHIRTHRNMFIYRCVICNIRLQSRDKLDKHMMTHLGNTVLYSCHICDHHSNNYEEISPKEEPDDHLIYIKSELEDIYTNEEIDYICFICREETMTKTDLEFHFMHEHDNTKITYKRKYELTNECHLCEICCEEFDSLKKLNQHYQNHENKHFCEQCNSGFKLIIDKIIHMFNHSTDGYYECLVCDHKTKYRNNIELHIDKHVNTMAIYKCKICIKRFRSVEQLNIHMNVHTGMKPFPCDCCDKAFSYSKSLFAHKKKMHNIDPDVIVCKICKKTRQTESGMVRHMRIHTKNHICDICQKAFKEKCKLALHIKKHYQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-