Truf019124.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tachinus rufipes
Gene Symbol
RREB1
Assembly
GCA_963932245.1
Location
OZ010743.1:3082219-3101753[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.00019 0.049 16.4 0.6 1 23 80 102 80 102 0.99
2 16 0.00038 0.1 15.5 0.4 1 23 115 137 115 137 0.98
3 16 2.3e-05 0.006 19.3 6.2 1 23 143 165 143 165 0.99
4 16 4 1.1e+03 2.8 0.1 2 22 215 236 214 238 0.76
5 16 0.016 4.3 10.3 4.5 2 23 244 266 244 266 0.93
6 16 2.5 6.7e+02 3.4 1.5 1 20 309 328 309 330 0.91
7 16 0.038 10 9.2 0.2 1 23 444 466 444 466 0.98
8 16 3e-05 0.008 18.9 1.0 1 23 475 497 475 497 0.99
9 16 0.00095 0.25 14.2 3.1 1 23 503 526 503 526 0.97
10 16 0.00081 0.21 14.4 2.8 1 23 852 875 852 875 0.96
11 16 0.00057 0.15 14.9 0.4 2 23 1069 1090 1068 1090 0.97
12 16 0.14 38 7.3 6.3 1 23 1096 1119 1096 1119 0.97
13 16 0.0054 1.4 11.8 1.0 1 20 1146 1166 1146 1167 0.96
14 16 6.4 1.7e+03 2.1 5.4 1 23 1218 1241 1218 1241 0.83
15 16 0.019 5 10.1 0.4 3 23 1288 1308 1286 1308 0.93
16 16 0.0086 2.3 11.2 5.9 1 23 1314 1336 1314 1336 0.98

Sequence Information

Coding Sequence
ATGCAAGGAGTACTTTGCATGCCACCACAGGAATACGGCTGTAGGATACGGGACGAACCTCATGaaacagcAATGGATGTAACAACAGAACCAATAACCAAAGACATAAACCAAAGTGATTCTGGAATATTTTCCGCAACCGCCAATTCAGACGAGCCGTTAAATATATCCAGTCGAACCCACCATTCCGAAAATGATACAGACAACCGATCAGAATGCAGCACACCTGATCGCAAATACGTTTGTCCCATATGTGAAACAATCCTAACATCGCAACATGAATTCACATTACACATACGATCCCATAACAACGATACCGAATTACAAGATCCCGAAAAAGGCTACACGTGCCGAATTTGTTTCAAAGTATTAAGCTCAAGTTCGAGCCTTGATAGACATGTTTTGGTGCATAGTGGTGAAAGACCATTTACGTGTAAACATTGCGGAGATACGTTTACTACTAATGGTAATATGCATAGACATATGCGTACGCATAAGGCTGAAAATTATGAATCTGATGGCAGCGATAGTAGTAGCAGTTCTAAAGggattgaatttaataataataaagttgaaaataatAAGAGGAAATTTGAAGAGGATTTTAAACCCAGAAAGAAAGCTTACTATGATGATTTCAATAAATGTCCAATATGTGATAGggatgattttattaatttaaaatcgttAGAAATGCATTTGGAGGATAATCATCCTGATTACCCCGCTAAATGTCATCAATGTAATAAgctttttaagaataataaaatgttaaatattcataaaactaATGAGCATGAGGATAACGGAAAGAAATCAGTGGTTGGTTTCAAGGATTTAACCTTTGTTGATTTTAGTAGTGAAAAATTCCCCACTATAGCTCGCTATGAATGTGagaaaaatttacacaaatcaTCAGCAGGATTCCAGTGCGGAAAATGTTCCCATGCATTTCCATGCGAAAGTGCTTTGGAAATCCACGCTAAACATTGTGGTAGTTTAGATCTTACTATGGATGGAGGAAAATTAAATGATAGTGAAATTAAAAGAAGCGATTTCTTTAATCGATTGGATTTACAAGATAACAGTCCGAAAATATTGGAATCACCCAGAAAACTCCAACAAAGATTGTTGGAAACTATGAAATCAATCGATAGCAGTAAAGATTTGGCTGATATTCAAACCATAATATCAATGACTACTAATGGAAGCCTATTGCAACATCTGCAACAAACTAAAGTTGAACCTAATGAGACTGAAAAAACCGAAGAAGAAGAATCGCAGGATGTTTTCGCACAGGAATTCCGCAAAATGAAACTACGTGGCGAATTTCCATGCAGATTATGCACTGCAATTTTTCCTAATTTAAGGGCTCTTAAAGGGCACAACAGGACGCATCTTAATAGCACCAATAATGGAACCTATAGGTGCAACATGTGTCCGCATTCTTCCATGGATAAGGCTGCATTGATTAGGCATATGCGTACGCATAATGGTGATAGGCCTTATGAATGTTCTTTATGCAACTATGCATTCACAACAAAAGCAAATTGCGAAAGACATTTAAGAAATAGGCATGCAAAAACCACACGGgatgaagtaaaaaaatcaataatttaccACCCATCCGAGGATCCTACTAATGAAGATATAACCAAATTGGATAACAACAAAAAGCTCAATTCAAGCACAAATTCAATAGATTCAAACGATTTAAGCACcgaaaaaattgttagaagttCAACTCCAAAAAATATTCCTGCCTTTCCTGATTTACAAATTCCCAAACAGGATTTTACTTCGTTATTACCGTTAAAACCTTTAGTATCACCCTACCTACCACCAGCCATTAATTTCACCCCTAAATTCACCAACACTTCAActccacaaaaaataaatcctaaaattcaagtcaaaaatttacaaaccttAAAGGAGATTCCTGAATACGATTACtcggaagaagaagaagattgtgAAGATATGGTTTTGGATTTGAGTAAGAAGAAacctgaaattaaaattgaagatGCGCCCGAAGATTTGACTAAAAAGAATGGTGACCAGGCGGTTAATATGAGTGAAATTTTGGCGCAACAATTGTTGAAGAATACTCCAAAAATTGATCATAATGCCTTAACTTATGCTTCGCAAATGGCTTTCTATCGGAATAGTTTCCCGAATTGGCCTGCATTTCCTATTAATCCTCTATTTTTGCAACCACCTATAATACAAGATCCTCAAGATATGAAAGAACGACTGCAACGTTTTCAGTTATGCAGTGGAGGCATGATAATGGATAACATTGCAGAGCGTTTGAAAAATTTTTACCCAcaaaataattaccaaaaagAATTCCCAACTACCCTACCAAAACCTGAAGATTTAAAGCCATTAAATATAGAAACCAATTTTAACGACAGTATCAAATTGAAGAGTCCTATATTAACACAAAAATCAGAACAACATTCACCAAATTCGGTTAAGATGGTTATCAAAAATGGTGTTTTAATGCCTAAGCAGAAGCAACGCCGCTATAGAACTGAGCGTCCTTTTAGTTGCGAACATTGCAGCGCTAGATTTACCCTGCGCTCAAACATGGAACGCCATATCAAACAACAGCATCCGCAATACTGGAGCCAGAGACAACGTTCATCTGTTGGAAACCCTGGAAGAAAACCACAATTAATGCCAATTAAATGCGAGTTAACTATCCCAAACTATGAAGCTCCAAAACATGAAGATACAATTTCGGATAAATTAAAGTATGCTATTTTGGCGCAACATTTACGCGCAGCACAAGATTCTTCGCATAAAAAGGAGGAGGAAGAGGATTGTGCTTTGGttatagatgaaattgataATAAGGAAGAGGTTAAGAGTAATATTTTGGAGGAAAAGTTGAAGGAGTTGAGGGAAAAGCAAATTTGTAATGAGAAGAAGGTTAAGAATGATGAAGCGCAGGATTTGGTGCCGGTTTCACGATTGTTGGATAATGCTTCGCAGCAAccttttaaagaatattttagtagggatgaacatgaacatgaaggGATTAGTGAAGAAGATGAGGAAGGACTTGTTGCAAGTGGAAGTACTAGTGAAGGGAATTCAGGAACTGATGAAAATAGgtcTGAAAGTGATACCACTCCTAATCAACCTCAAAAAAAGAAGTCAGCCTATTCATTGGCCCCAAACCGCGTAAGCTGTCCATACTGTAGCCGAAAATTCCCATGGACCTCATCGCTCCGTAGACACATCCTAACCCACACTGGTCAAAAACCATTCAAATGCAGCCACTGTCCTCTACTATTCACAACAAAATCCAATTGCGACCGACACTTATTGCGTAAACACGGCAACACCGCAACAACAATCAGTAACGAAAAcgtaaacaacaacaatttcatGATGCGCAACGTCCCTGAACGCCCATTCAAATGTTCAGTATGTCCAAGCAGCACATTCTCAACCtactcaaacttaaaaaaacacatgacTTGCAAGCATGGTCAACACGATGATAGGCAAGGATACGAAGCAGGTAGTTCcgaagatgaaaaaaataacagcGATCAAAAAAGTGATTGGGAATCTCAAATCAGCAAAGTGCATTTAGGTGAGAATCAAATTGCCAATTCAGATTTGCCATTCAAATGCCATTTATGCGATCATAGTTTCGGTGAGCGACAAGAATGTTTGGATCACATTAAAGATAAGCATGCTTCTGAATACGATTTATTGATGGCGAAAAATGCTTTAGATGCTAATGCTTCTACTCCTGATGAAGGGGGTAATCATGATGATGACGATAATGAGATTCGTGGTAAATTCCCTGATTATAGTAATAGAAAAGTTATTTGTGCTTTTTGTATGAGGAGGTTTTGGTCTGCTGAGGATTTGCGAAGACATATGCGTACCCATACTGGTGAACGTCCATTCAGTTGCGACATTTGCAGAAGGAGGTTCACTCTAAAACATAGTATGTTGCGTCATCGTAAGAAACATAATGTTCCTTATAATGATGCCGCGCATAGTGATGATGAGTTAGCAacgaataaaattgataataataatttaaaaactgatgaATCGGATGGTAATGAAGGTAGCGATTTAATAAGCAATCTATTAGGCATTAAGGATCGTTCTATAATTGAACAAGTATTAACAGCGTCTGCTAATGACGCAGCGAAACTCTTAGGGGTGcaggaataa
Protein Sequence
MQGVLCMPPQEYGCRIRDEPHETAMDVTTEPITKDINQSDSGIFSATANSDEPLNISSRTHHSENDTDNRSECSTPDRKYVCPICETILTSQHEFTLHIRSHNNDTELQDPEKGYTCRICFKVLSSSSSLDRHVLVHSGERPFTCKHCGDTFTTNGNMHRHMRTHKAENYESDGSDSSSSSKGIEFNNNKVENNKRKFEEDFKPRKKAYYDDFNKCPICDRDDFINLKSLEMHLEDNHPDYPAKCHQCNKLFKNNKMLNIHKTNEHEDNGKKSVVGFKDLTFVDFSSEKFPTIARYECEKNLHKSSAGFQCGKCSHAFPCESALEIHAKHCGSLDLTMDGGKLNDSEIKRSDFFNRLDLQDNSPKILESPRKLQQRLLETMKSIDSSKDLADIQTIISMTTNGSLLQHLQQTKVEPNETEKTEEEESQDVFAQEFRKMKLRGEFPCRLCTAIFPNLRALKGHNRTHLNSTNNGTYRCNMCPHSSMDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTRDEVKKSIIYHPSEDPTNEDITKLDNNKKLNSSTNSIDSNDLSTEKIVRSSTPKNIPAFPDLQIPKQDFTSLLPLKPLVSPYLPPAINFTPKFTNTSTPQKINPKIQVKNLQTLKEIPEYDYSEEEEDCEDMVLDLSKKKPEIKIEDAPEDLTKKNGDQAVNMSEILAQQLLKNTPKIDHNALTYASQMAFYRNSFPNWPAFPINPLFLQPPIIQDPQDMKERLQRFQLCSGGMIMDNIAERLKNFYPQNNYQKEFPTTLPKPEDLKPLNIETNFNDSIKLKSPILTQKSEQHSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQYWSQRQRSSVGNPGRKPQLMPIKCELTIPNYEAPKHEDTISDKLKYAILAQHLRAAQDSSHKKEEEEDCALVIDEIDNKEEVKSNILEEKLKELREKQICNEKKVKNDEAQDLVPVSRLLDNASQQPFKEYFSRDEHEHEGISEEDEEGLVASGSTSEGNSGTDENRSESDTTPNQPQKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNTATTISNENVNNNNFMMRNVPERPFKCSVCPSSTFSTYSNLKKHMTCKHGQHDDRQGYEAGSSEDEKNNSDQKSDWESQISKVHLGENQIANSDLPFKCHLCDHSFGERQECLDHIKDKHASEYDLLMAKNALDANASTPDEGGNHDDDDNEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVPYNDAAHSDDELATNKIDNNNLKTDESDGNEGSDLISNLLGIKDRSIIEQVLTASANDAAKLLGVQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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