Basic Information

Insect: Tachinus rufipes
Gene Symbol: -
Assembly: GCA_963932245.1
Location: OZ010742.1:117596544-117601289[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0045 1.2 12.1 1.9 3 23 320 340 319 340 0.97

2 9 0.057 15 8.6 0.2 2 23 351 373 350 373 0.94

3 9 1.5e-06 0.00039 23.0 2.5 2 23 380 401 379 401 0.97

4 9 0.00017 0.044 16.6 2.0 1 23 407 429 407 429 0.97

5 9 7.7e-05 0.02 17.6 0.7 1 19 435 453 435 454 0.96

6 9 2.6e-06 0.0007 22.2 3.4 1 23 464 486 464 486 0.98

7 9 8.6e-05 0.023 17.5 2.8 1 23 492 514 492 514 0.98

8 9 6.2e-09 1.6e-06 30.5 1.4 1 23 520 542 520 542 0.98

9 9 0.003 0.78 12.6 6.5 1 23 548 571 548 571 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0045	1.2	12.1	1.9	3	23	320	340	319	340	0.97
2	9	0.057	15	8.6	0.2	2	23	351	373	350	373	0.94
3	9	1.5e-06	0.00039	23.0	2.5	2	23	380	401	379	401	0.97
4	9	0.00017	0.044	16.6	2.0	1	23	407	429	407	429	0.97
5	9	7.7e-05	0.02	17.6	0.7	1	19	435	453	435	454	0.96
6	9	2.6e-06	0.0007	22.2	3.4	1	23	464	486	464	486	0.98
7	9	8.6e-05	0.023	17.5	2.8	1	23	492	514	492	514	0.98
8	9	6.2e-09	1.6e-06	30.5	1.4	1	23	520	542	520	542	0.98
9	9	0.003	0.78	12.6	6.5	1	23	548	571	548	571	0.95

Sequence Information

Coding Sequence: atggaACAAAGAATAGTCTGGACCCGCGAAATCGTAAAATGTTtagtagaaaattacaaatccCACAAATGTCTCTACACTCCAGAATTATTAAGTTACAGagataaaattgaaagaaaaaaactagacGAAAGCATAAAATCAAAAGTACTGCAAAAATTTCCTAGTTTGATCAATTTAACAACAGACGAcatcagaaaaaaaatgcaCTCACTTAGATCGCAGTTCTTTAGAGTGAAAAAGaatatagacaataaaaaactaagttatGAATTGAGACCCTGGTTTTATGATGTGTTATCATTTCTCgcagatgttaaaaataatgacgATGAGGATTCGAGTTTGGATAATTCACAAATGGATATTGATGTAGATAATATTAAAGTTGAATTAGAAGAATGCAATCAACGATGTCGAGTTTGTTTGATAGAAACGAGTTGTTGTATATCGTTGAATGATAGACTTATCATCGAGCAAAATGATTTGTTAGTATCGAATATATTACTCACTTTTGCAGATATTAAGATTTTACCTGATGATAAGAAACCACAAAGAATCTGTCGATCTTGTGGAGATGATGCTATCAGTGCATAcaaatttaaactgaaatgtGAACAATCTGATGCAATTTTGTCTAATGAGTCAATCATTAAAGTACCAATTGATAATATTTGGGAACAGGATACCATTGACACTGACCAACTAAAAAAGGAAAACATTGAAGAAGAAAACAGCGAAGAATCAACTACAAATATAGAACACTATGATCTAGAATCTTTTGAAGATGAATATATCGACGAAAGTATCGATGGACAAATTGGCGATGATGAAGATGATGATACTAACGATGGCAAAATCAAAGTTGATAGTAACGATGAACAAAACATTCATGATACTAAAGATTTCAAACAAAATGAAGAAGCAATTGACCAATCCACAGTATCACCAAATATTTGCACAATGTGTTGCAAAGTATTCCAATATAAATCCGGTTTAAAAGCACACATATTACGtcatttcaaaccaaaaacaccaaaatcagtagtaaaatgtcaaaattgcgATTACGAAACTGACAATCCAGCTAAATTAGGTAAACATTTAGAACAAAATCACACGGAATTGAGAAATATCCAGTGCACATTATGCGATAAAAAGTTTATGAGAAACAAAAATCTGAAACAACACATGAGTACACATACAAACAGACGAAATCATACTTGCGAATTTTGCggcaataattttgcaaatacacaaaatttaaagaaacactTGCTGATACACTCTGGTGAAAAACCATTCGAATGTGATAAATGCGGAAAACGCTTCACGCAAAAAGCCAGTTTATACTTACACGATATACACGTGCATTGTGACGATAGGAATTTTCACTGCACGCAATGTGGTGGAACGTTTAAAAGACGAAGTACATTAAATGCACATTTACGGACGCATAGTGGTATCAAACCGCATAAATGTTCGATATGTAATGTAACCACAAGAAATTTGAGTAGTATGCGGAAGCATATGATAACACATACAGGTGATGCCGATTATGAATGTGAACAATGCGGGAAGAAGTTCAATAGGAAATCAAATTTAAGAGTGCATATGATGAGTCATACTGGAGAGAAACCGCATGTTTGTCACGTTTGTGGAAATCGGTTTAGTCAGGCACATTGTTTGCGATCACATCTGGCAAGTCAACATAGTAGTGAAAAAAgctaa
Protein Sequence: MEQRIVWTREIVKCLVENYKSHKCLYTPELLSYRDKIERKKLDESIKSKVLQKFPSLINLTTDDIRKKMHSLRSQFFRVKKNIDNKKLSYELRPWFYDVLSFLADVKNNDDEDSSLDNSQMDIDVDNIKVELEECNQRCRVCLIETSCCISLNDRLIIEQNDLLVSNILLTFADIKILPDDKKPQRICRSCGDDAISAYKFKLKCEQSDAILSNESIIKVPIDNIWEQDTIDTDQLKKENIEEENSEESTTNIEHYDLESFEDEYIDESIDGQIGDDEDDDTNDGKIKVDSNDEQNIHDTKDFKQNEEAIDQSTVSPNICTMCCKVFQYKSGLKAHILRHFKPKTPKSVVKCQNCDYETDNPAKLGKHLEQNHTELRNIQCTLCDKKFMRNKNLKQHMSTHTNRRNHTCEFCGNNFANTQNLKKHLLIHSGEKPFECDKCGKRFTQKASLYLHDIHVHCDDRNFHCTQCGGTFKRRSTLNAHLRTHSGIKPHKCSICNVTTRNLSSMRKHMITHTGDADYECEQCGKKFNRKSNLRVHMMSHTGEKPHVCHVCGNRFSQAHCLRSHLASQHSSEKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -