Basic Information

Insect: Tachinus rufipes
Gene Symbol: -
Assembly: GCA_963932245.1
Location: OZ010749.1:65992239-65994244[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00024 0.063 16.1 2.2 2 21 320 339 319 341 0.94

2 11 1.6e-06 0.00042 22.9 0.9 1 23 347 369 347 369 0.99

3 11 0.00038 0.1 15.4 2.7 1 23 375 397 375 397 0.98

4 11 7.2e-06 0.0019 20.9 2.6 1 23 403 425 403 425 0.98

5 11 2.4e-06 0.00062 22.4 0.1 1 23 431 453 431 453 0.98

6 11 1.1e-06 0.00029 23.4 3.1 1 23 459 481 459 481 0.99

7 11 7.5e-06 0.002 20.8 5.7 1 23 487 509 487 509 0.99

8 11 7.9e-07 0.00021 23.9 1.0 1 23 515 537 515 537 0.99

9 11 4.2e-06 0.0011 21.6 2.0 1 23 543 565 543 565 0.98

10 11 1.2e-05 0.0032 20.2 5.5 1 23 571 593 571 593 0.97

11 11 0.032 8.5 9.4 2.1 1 23 599 622 599 622 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00024	0.063	16.1	2.2	2	21	320	339	319	341	0.94
2	11	1.6e-06	0.00042	22.9	0.9	1	23	347	369	347	369	0.99
3	11	0.00038	0.1	15.4	2.7	1	23	375	397	375	397	0.98
4	11	7.2e-06	0.0019	20.9	2.6	1	23	403	425	403	425	0.98
5	11	2.4e-06	0.00062	22.4	0.1	1	23	431	453	431	453	0.98
6	11	1.1e-06	0.00029	23.4	3.1	1	23	459	481	459	481	0.99
7	11	7.5e-06	0.002	20.8	5.7	1	23	487	509	487	509	0.99
8	11	7.9e-07	0.00021	23.9	1.0	1	23	515	537	515	537	0.99
9	11	4.2e-06	0.0011	21.6	2.0	1	23	543	565	543	565	0.98
10	11	1.2e-05	0.0032	20.2	5.5	1	23	571	593	571	593	0.97
11	11	0.032	8.5	9.4	2.1	1	23	599	622	599	622	0.93

Sequence Information

Coding Sequence: ATGGAGATGATGGAAGTTTGTAGGACTTGCTTGAAATTATTCAACATTAACAACTGCACACATTATGAAATTGAAGGACCTGAAATCCAACTATCACCACAATCGCAACGTTACATAATATTAAGTGTAATTCCAGAAATggctTTAAATGTATCGAAGAAAGCGTTTATATGTAAGCCGTGCCATGATAAGTTACAAATGATGTATGAGTTTAAAGCGAAATGTTCGTTAACAGAAAGTCGTATAATGCGTTACATTTCAACCAGACTTGATGTTAATATAAGTGATTTGGATTTAAAACATGTTGCTTTTGTCAATAATACTGGTTTTGTTACAAATGATTTGCCGATTAATGAAatgaaaatgaatataaaaatcgATAAAATTGTAGGTAATTGTTCACAATTGGAGGAAGCTGAAATGGACAATAAAGATTATTCGGTGGATGTTGTGAAAATATCTCAGGAAACTAAAGTAACAATCAAGCAAGAATATACAGACGATGATTTTAGTCAGGATTGTTGTATTGATGAAAGTATAACTGTTGTTAAACACGaggttaataattatttgtcgGAAATAGAAGAAGTGATTCAAccagaaaatactgtttttagtttgcataagaatgaaattattgatgattttaataaGGTTGATAGCAATAATAAAGATGTAAATATAAACAGTGTAACGGAAACATTAAATACTGCCATTGTGAAAACGAGCAACGATATTTctcaagaattaaatttttctaataatattaatcaaacgTTAAATATTACTGAAGACAattctaaaacaataattattaagaaTGTTAGTAAACCAATAGACACAGCTAAGGAAGTTTCTGAATTATTAGATTCTACTAATGATAATTGTGATACATTAGATGCATCTTTTGATGCACCTCCAGACTCAACTGAAGTGTCTAATCAAGAAGAAGGAATAAAATGCGGTGTTTGCCAAAAAACTTTCATCAACAAATCTCGCTTAAAAGTGCATATGCTTTGCCACACTGATGAACGTCCATATAAATGTACTGCATGTCCGAAAGGATTCAACGATAAAAGTAccttaaataaacatttaaaaattcattctGGAATTAAAGAATTTGAATGTGATATATGTCAAAGACAATTTTATTGTCgtggtaatttaaataaacatatggCTACACATAGTGGGGAGCGTCCCTTTAAATGCGAAGTATGCGAGAAGGATTTTAGTCGGAATGAACATTTAAAGCAGCATAAATTGATTCATACTGGtgaaaaaacatttgaatgTGATATATGCGCTAAAAAATTTGCCCGTCGTGATTCGTTAATAATACACATGATGGTGCATACAGGGGTGAGGAATTATGTTTGTGAATATTGTGATAAACGTTGTATTGATAGTAGtacattaaaaaagcatttgcgTAGCCATACTGGTGATAAACCATACGAATGCGAAATATGCAATCACAAGTTTacacaaaaaacgcatttaacaaTACATTTACGAAAACATACAGGTGAGCGTCCATATGAATGTAATGTATGCAGTAAAGCATTTTATTcgagcaattatttaaaaattcatatacGAACGCACACGAAGGAACAACCATATGAATGCTCTGTTTGTAAAAAGAAGTTTTCAACGCTAAGCAATCTatcgatgcataaaaaaattcacaCGGGTATTAAGGACTTTGCATGTGGacattgcaataaaatgtttattcataAACATGATTTAAGGAAGCACATAATGGTGCATACACAGGAAAGACCGTTTGCTTGTCATTTATGCAAAAAggctttcaataaaaaaattcgtGCCAAGCAGCATATTCTCAATATGCATAAGGAAGTTGATATCAATACGATTCTAATTGAACGGCACAGCACAACAGTAATCAGTCTTAAAACTGAAGAGGTCGCTGCTAATTTATGA
Protein Sequence: MEMMEVCRTCLKLFNINNCTHYEIEGPEIQLSPQSQRYIILSVIPEMALNVSKKAFICKPCHDKLQMMYEFKAKCSLTESRIMRYISTRLDVNISDLDLKHVAFVNNTGFVTNDLPINEMKMNIKIDKIVGNCSQLEEAEMDNKDYSVDVVKISQETKVTIKQEYTDDDFSQDCCIDESITVVKHEVNNYLSEIEEVIQPENTVFSLHKNEIIDDFNKVDSNNKDVNINSVTETLNTAIVKTSNDISQELNFSNNINQTLNITEDNSKTIIIKNVSKPIDTAKEVSELLDSTNDNCDTLDASFDAPPDSTEVSNQEEGIKCGVCQKTFINKSRLKVHMLCHTDERPYKCTACPKGFNDKSTLNKHLKIHSGIKEFECDICQRQFYCRGNLNKHMATHSGERPFKCEVCEKDFSRNEHLKQHKLIHTGEKTFECDICAKKFARRDSLIIHMMVHTGVRNYVCEYCDKRCIDSSTLKKHLRSHTGDKPYECEICNHKFTQKTHLTIHLRKHTGERPYECNVCSKAFYSSNYLKIHIRTHTKEQPYECSVCKKKFSTLSNLSMHKKIHTGIKDFACGHCNKMFIHKHDLRKHIMVHTQERPFACHLCKKAFNKKIRAKQHILNMHKEVDINTILIERHSTTVISLKTEEVAANL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -