Basic Information

Insect: Tachinus rufipes
Gene Symbol: -
Assembly: GCA_963932245.1
Location: OZ010745.1:3110686-3126333[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.5e-07 3.8e-05 26.2 1.3 1 23 257 279 257 279 0.98

2 12 3.1e-06 0.00083 22.0 7.2 1 23 285 307 285 307 0.98

3 12 4.6e-06 0.0012 21.5 0.8 1 23 313 335 313 335 0.99

4 12 0.041 11 9.1 3.2 1 23 341 363 341 363 0.95

5 12 0.00033 0.086 15.7 0.9 1 23 369 391 369 391 0.98

6 12 1.3e-08 3.3e-06 29.5 3.5 1 23 397 419 397 419 0.99

7 12 6.3e-06 0.0017 21.0 3.6 3 23 426 446 424 446 0.96

8 12 3.5e-06 0.00092 21.8 3.1 1 23 452 474 452 474 0.99

9 12 0.00011 0.03 17.1 3.1 1 23 479 501 479 501 0.98

10 12 1.6e-06 0.00042 22.9 4.0 2 23 508 529 507 529 0.98

11 12 5.3e-08 1.4e-05 27.6 1.8 1 23 535 557 535 557 0.99

12 12 4.8e-05 0.013 18.3 0.7 1 23 563 585 563 585 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.5e-07	3.8e-05	26.2	1.3	1	23	257	279	257	279	0.98
2	12	3.1e-06	0.00083	22.0	7.2	1	23	285	307	285	307	0.98
3	12	4.6e-06	0.0012	21.5	0.8	1	23	313	335	313	335	0.99
4	12	0.041	11	9.1	3.2	1	23	341	363	341	363	0.95
5	12	0.00033	0.086	15.7	0.9	1	23	369	391	369	391	0.98
6	12	1.3e-08	3.3e-06	29.5	3.5	1	23	397	419	397	419	0.99
7	12	6.3e-06	0.0017	21.0	3.6	3	23	426	446	424	446	0.96
8	12	3.5e-06	0.00092	21.8	3.1	1	23	452	474	452	474	0.99
9	12	0.00011	0.03	17.1	3.1	1	23	479	501	479	501	0.98
10	12	1.6e-06	0.00042	22.9	4.0	2	23	508	529	507	529	0.98
11	12	5.3e-08	1.4e-05	27.6	1.8	1	23	535	557	535	557	0.99
12	12	4.8e-05	0.013	18.3	0.7	1	23	563	585	563	585	0.97

Sequence Information

Coding Sequence: ATGTCAAGTCAAATCATCTATAATGAAAGAACTAGTCCTAATGCACTTACAATGGATAATATGTTCCATGTTGCTGATTGTTGTAGAGCATGTCTTCGGATTGAGTGTTCCTTGACTCCAACTAGTACTGCCGATAGTGATCAAATCAAGTTTTCCGATAAATTAATCACCTGTGTTTCCGAAGTGggTTGGTTGAAAGTGGGGCTTCCATCATTAATCTGTTCAACCTGTATAGACCGCTTACGAATCGCATACGAGTTCCGAAACGTATGCATCCAATCGGATCACACCTTACTAAGATACATGTCGCATCAACACGatgacaacaataaaaatttagtaggGCGACCATTAACGACTCCAACCAAATTCGAATTCACAATACCGACAAGCGAACCAATGacatcaacaacaacaattcAAGAAGAGGGTAATGTTATAGACGAACCACAGAATGCCGAATATTTGCATTTGAAACATTTCTTGGATAACGATGAGGATTTAAGTAAAGGGGAAGTATTAGTTGAAACTAGTACTTCAACTAGAAGCACAACTCCGGAAGAAACGTTTTTTAAACATGATGGGATTATACATATAGAACAATTGCAGCCGGTTTATCAGGCTTTGGATGATAATTCGCAACAAACTCAGGACATTATTGTGGAGCAAGCTACTTCGACTCCGATTAGGCCAATAATTGGTAAGCGTACTACTGGGGTGCAATCAAGGGCTGAAACGCCTAATAGTCAGGTTCAATTGGATAAACCTTTTAATTGTACTGTTTGTGGTAAAAATTATCGCAAGAATGCGAATTTGCGTATACATATGAGGACGCATACTGGTGAGAAGCCGTTTGAATGTAAATATTGCGAGAAGAGGTTTTATCATTCCTCACATTTACGCGAACATATCCGTAGACATACTGGTGAGAAACCGTTTCAATGTGCTGTTTGTAATAAAAGATTTACAATTAAAGGTGAGTTAACGATGCATATGAAATCGCATACTGGTGAGAAGCCGTATGCTTGTACTTGCTGTGATAGGAGGTGTTTAACGGCGGCTGATTTAAAAGTGCACATGCGCACTCATACGGGGGAAAAACCTTTCAGTTGCGTTACTTGTGGTAAGAAATTTGCAAGTACTTACATATTGAATTCGCATATTAAAACGCATACTGGTGAGAGGCCCTATTCATGTTCTGTATGTGATAAAACGTTTACTCAATCATCTCATTTGAATGTACACATGCGTAAACATACAGGGGAAAAAGTTTGTTGCAAAATATGCGATGCTAAATTCACTCATTCGTCGCAGCTGACAGTGCATATGAGGGAACATACAGGTAAGCAACCTTATAAATGTTCAATGTGCAATAAAGTTTGCAACTACGCATCTGAATTGCAAACTCATATGATGAAGCATACGGGGGAAAAGTTTTCCTGTTTGACTTGTGATAAGAAATTTACAACTGCCGCCTATTTGCATGAACATAATCGTACACATACTGGTGAGAATCTGTCGACTTGTAACATATGCGATAGGCAATTTACAAGACATCAATATTTAGAGAAACATATGCGCACGCATACCGGTGAAAAGCCGTATACGTGTTTTACGTGCGGTAAGAAATTTACTCAATCCTCTTCGCTCAAAGTACATATTCGCATACATACAGGGGAGAAACCGTACGCGTGTCTAGTGTGCGAACGGAGATTTACGACTTCATCCGATCTGTCTGCGCATAATAAAAAGcataagaaatatattaatttgtaa
Protein Sequence: MSSQIIYNERTSPNALTMDNMFHVADCCRACLRIECSLTPTSTADSDQIKFSDKLITCVSEVGWLKVGLPSLICSTCIDRLRIAYEFRNVCIQSDHTLLRYMSHQHDDNNKNLVGRPLTTPTKFEFTIPTSEPMTSTTTIQEEGNVIDEPQNAEYLHLKHFLDNDEDLSKGEVLVETSTSTRSTTPEETFFKHDGIIHIEQLQPVYQALDDNSQQTQDIIVEQATSTPIRPIIGKRTTGVQSRAETPNSQVQLDKPFNCTVCGKNYRKNANLRIHMRTHTGEKPFECKYCEKRFYHSSHLREHIRRHTGEKPFQCAVCNKRFTIKGELTMHMKSHTGEKPYACTCCDRRCLTAADLKVHMRTHTGEKPFSCVTCGKKFASTYILNSHIKTHTGERPYSCSVCDKTFTQSSHLNVHMRKHTGEKVCCKICDAKFTHSSQLTVHMREHTGKQPYKCSMCNKVCNYASELQTHMMKHTGEKFSCLTCDKKFTTAAYLHEHNRTHTGENLSTCNICDRQFTRHQYLEKHMRTHTGEKPYTCFTCGKKFTQSSSLKVHIRIHTGEKPYACLVCERRFTTSSDLSAHNKKHKKYINL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00369700;
90% Identity: -
80% Identity: -